RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 CTAGE5O15320 804 aa16.42■□□□□ 0.22
LDB3-207ENST00000542786 NMT2O60551 498 aa16.42■□□□□ 0.22
LDB3-207ENST00000542786 WDHD1O75717 1129 aaPredicted RBP16.42■□□□□ 0.22
LDB3-207ENST00000542786 APBA3O96018 575 aa16.42■□□□□ 0.22
LDB3-207ENST00000542786 LDHCP07864 332 aa16.42■□□□□ 0.22
LDB3-207ENST00000542786 CLCN1P35523 988 aa16.42■□□□□ 0.22
LDB3-207ENST00000542786 NT5C2P49902 561 aa16.42■□□□□ 0.22
LDB3-207ENST00000542786 ANKS1AQ92625 1134 aa16.42■□□□□ 0.22
LDB3-207ENST00000542786 QSER1Q2KHR3 1735 aa16.41■□□□□ 0.22
LDB3-207ENST00000542786 FAM237AA0A1B0GTK4 181 aa16.41■□□□□ 0.22
LDB3-207ENST00000542786 PLEKHA8P1O95397 391 aa16.41■□□□□ 0.22
LDB3-207ENST00000542786 SLC3A2P08195 630 aaKnown RBP16.41■□□□□ 0.22
LDB3-207ENST00000542786 TRIM29Q14134 588 aa16.41■□□□□ 0.22
LDB3-207ENST00000542786 TMTC3Q6ZXV5 915 aa16.41■□□□□ 0.22
LDB3-207ENST00000542786 CATIPQ7Z7H3 387 aa16.41■□□□□ 0.22
LDB3-207ENST00000542786 ZSCAN30Q86W11 494 aa16.41■□□□□ 0.22
LDB3-207ENST00000542786 NOSTRINQ8IVI9 506 aa16.41■□□□□ 0.22
LDB3-207ENST00000542786 PRPF3O43395 683 aaKnown RBP16.4■□□□□ 0.22
LDB3-207ENST00000542786 TOB1P50616 345 aaPredicted RBP16.4■□□□□ 0.22
LDB3-207ENST00000542786 NDUFA8P51970 172 aa16.4■□□□□ 0.22
LDB3-207ENST00000542786 RHBDL3P58872 404 aa16.4■□□□□ 0.22
LDB3-207ENST00000542786 SF3A1Q15459 793 aaKnown RBP16.4■□□□□ 0.22
LDB3-207ENST00000542786 ANO6Q4KMQ2 910 aa16.4■□□□□ 0.22
LDB3-207ENST00000542786 FAM47AQ5JRC9 791 aa16.4■□□□□ 0.22
LDB3-207ENST00000542786 FOXP1Q9H334 677 aaPredicted RBP16.4■□□□□ 0.22
LDB3-207ENST00000542786 RBM28Q9NW13 759 aaKnown RBP16.4■□□□□ 0.22
LDB3-207ENST00000542786 KCNJ14Q9UNX9 436 aa16.4■□□□□ 0.22
LDB3-207ENST00000542786 CNTNAP5Q8WYK1 1306 aa16.4■□□□□ 0.22
LDB3-207ENST00000542786 BTBD18B2RXH4 712 aa16.39■□□□□ 0.22
LDB3-207ENST00000542786 PPP6R2O75170 966 aa16.39■□□□□ 0.22
LDB3-207ENST00000542786 BAG3O95817 575 aa16.39■□□□□ 0.22
LDB3-207ENST00000542786 CALM1P0DP23 149 aa16.39■□□□□ 0.22
LDB3-207ENST00000542786 CALM2P0DP24 149 aa16.39■□□□□ 0.22
LDB3-207ENST00000542786 CALM3P0DP25 149 aa16.39■□□□□ 0.22
LDB3-207ENST00000542786 NPR1P16066 1061 aa16.39■□□□□ 0.22
LDB3-207ENST00000542786 CMA1P23946 247 aa16.39■□□□□ 0.22
LDB3-207ENST00000542786 PDE4BQ07343 736 aa16.39■□□□□ 0.22
LDB3-207ENST00000542786 CERS3Q8IU89 383 aa16.39■□□□□ 0.22
LDB3-207ENST00000542786 DIS3L2Q8IYB7 885 aaKnown RBP16.39■□□□□ 0.22
LDB3-207ENST00000542786 FLAD1Q8NFF5 587 aa16.39■□□□□ 0.22
LDB3-207ENST00000542786 CBX8Q9HC52 389 aa16.39■□□□□ 0.22
LDB3-207ENST00000542786 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.39■□□□□ 0.22
LDB3-207ENST00000542786 IL17RBQ9NRM6 502 aa16.39■□□□□ 0.22
LDB3-207ENST00000542786 MYH6P13533 1939 aa16.39■□□□□ 0.21
LDB3-207ENST00000542786 A0A1B0GVL5 298 aa16.39■□□□□ 0.21
LDB3-207ENST00000542786 KINO60870 393 aaKnown RBP16.39■□□□□ 0.21
LDB3-207ENST00000542786 ADCY5O95622 1261 aa16.39■□□□□ 0.21
LDB3-207ENST00000542786 BTDP43251 543 aa16.39■□□□□ 0.21
LDB3-207ENST00000542786 DYNLL2Q96FJ2 89 aa16.39■□□□□ 0.21
LDB3-207ENST00000542786 NOL7Q9UMY1 257 aaKnown RBP16.39■□□□□ 0.21
LDB3-207ENST00000542786 HPSEQ9Y251 543 aa16.39■□□□□ 0.21
LDB3-207ENST00000542786 FOCADQ5VW36 1801 aa16.39■□□□□ 0.21
LDB3-207ENST00000542786 SNED1Q8TER0 1413 aa16.38■□□□□ 0.21
LDB3-207ENST00000542786 MMP10P09238 476 aa16.38■□□□□ 0.21
LDB3-207ENST00000542786 USP5P45974 858 aa16.38■□□□□ 0.21
LDB3-207ENST00000542786 MFSD14BQ5SR56 506 aa16.38■□□□□ 0.21
LDB3-207ENST00000542786 CCDC82Q8N4S0 544 aa16.38■□□□□ 0.21
LDB3-207ENST00000542786 OXER1Q8TDS5 423 aa16.38■□□□□ 0.21
LDB3-207ENST00000542786 TBC1D22AQ8WUA7 517 aa16.38■□□□□ 0.21
LDB3-207ENST00000542786 NPY5RQ15761 445 aa16.37■□□□□ 0.21
LDB3-207ENST00000542786 OLFM4Q6UX06 510 aa16.37■□□□□ 0.21
LDB3-207ENST00000542786 SRBD1Q8N5C6 995 aaKnown RBP16.37■□□□□ 0.21
LDB3-207ENST00000542786 TGFBRAP1Q8WUH2 860 aa16.37■□□□□ 0.21
LDB3-207ENST00000542786 TCP11L1Q9NUJ3 509 aa16.37■□□□□ 0.21
LDB3-207ENST00000542786 C6orf229H3BNL8 230 aa16.37■□□□□ 0.21
LDB3-207ENST00000542786 PFKFB1P16118 471 aa16.37■□□□□ 0.21
LDB3-207ENST00000542786 MARCKSP29966 332 aaPredicted RBP16.37■□□□□ 0.21
LDB3-207ENST00000542786 PLCD1P51178 756 aa16.37■□□□□ 0.21
LDB3-207ENST00000542786 SHC4Q6S5L8 630 aa16.37■□□□□ 0.21
LDB3-207ENST00000542786 SASS6Q6UVJ0 657 aa16.37■□□□□ 0.21
LDB3-207ENST00000542786 LUZP1Q86V48 1076 aa16.37■□□□□ 0.21
LDB3-207ENST00000542786 PHF20Q9BVI0 1012 aa16.37■□□□□ 0.21
LDB3-207ENST00000542786 COA1Q9GZY4 146 aa16.37■□□□□ 0.21
LDB3-207ENST00000542786 CCDC39Q9UFE4 941 aa16.37■□□□□ 0.21
LDB3-207ENST00000542786 CAVIN2O95810 425 aa16.36■□□□□ 0.21
LDB3-207ENST00000542786 NR5A1Q13285 461 aa16.36■□□□□ 0.21
LDB3-207ENST00000542786 IQCB1Q15051 598 aa16.36■□□□□ 0.21
LDB3-207ENST00000542786 SAFBQ15424 915 aaKnown RBP eCLIP16.36■□□□□ 0.21
LDB3-207ENST00000542786 RESP18Q5W5W9 173 aa16.36■□□□□ 0.21
LDB3-207ENST00000542786 C11orf57Q6ZUT1 292 aaPredicted RBP16.36■□□□□ 0.21
LDB3-207ENST00000542786 DGKHQ86XP1 1220 aa16.36■□□□□ 0.21
LDB3-207ENST00000542786 MAPKAPK5Q8IW41 473 aa16.36■□□□□ 0.21
LDB3-207ENST00000542786 CERS5Q8N5B7 392 aa16.36■□□□□ 0.21
LDB3-207ENST00000542786 SLC44A5Q8NCS7 719 aa16.36■□□□□ 0.21
LDB3-207ENST00000542786 TNFRSF25Q93038 417 aa16.36■□□□□ 0.21
LDB3-207ENST00000542786 DNAJC25Q9H1X3 360 aa16.36■□□□□ 0.21
LDB3-207ENST00000542786 MORC2Q9Y6X9 1032 aaPredicted RBP16.36■□□□□ 0.21
LDB3-207ENST00000542786 FLT1P17948 1338 aa16.36■□□□□ 0.21
LDB3-207ENST00000542786 TSPY2A6NKD2 308 aa16.35■□□□□ 0.21
LDB3-207ENST00000542786 RASA1P20936 1047 aa16.35■□□□□ 0.21
LDB3-207ENST00000542786 PDE6BP35913 854 aa16.35■□□□□ 0.21
LDB3-207ENST00000542786 TFAP4Q01664 338 aa16.35■□□□□ 0.21
LDB3-207ENST00000542786 SLC4A8Q2Y0W8 1093 aa16.35■□□□□ 0.21
LDB3-207ENST00000542786 NOL10Q9BSC4 688 aaKnown RBP16.35■□□□□ 0.21
LDB3-207ENST00000542786 DAGLAQ9Y4D2 1042 aa16.35■□□□□ 0.21
LDB3-207ENST00000542786 V9GY48 417 aaPredicted RBP16.35■□□□□ 0.21
LDB3-207ENST00000542786 PLCG2P16885 1265 aa16.35■□□□□ 0.21
LDB3-207ENST00000542786 GNL2Q13823 731 aaKnown RBP16.35■□□□□ 0.21
LDB3-207ENST00000542786 STX1AQ16623 288 aa16.35■□□□□ 0.21
LDB3-207ENST00000542786 C16orf86Q6ZW13 317 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms