RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 POTEEQ6S8J3 1075 aa21.94■■□□□ 1.1
CLSTN3-214ENST00000542663 ADGRA1Q86SQ6 560 aa21.94■■□□□ 1.1
CLSTN3-214ENST00000542663 METTL16Q86W50 562 aaKnown RBP21.94■■□□□ 1.1
CLSTN3-214ENST00000542663 DHX36Q9H2U1 1008 aaKnown RBP21.94■■□□□ 1.1
CLSTN3-214ENST00000542663 AATFQ9NY61 560 aaKnown RBP eCLIP21.94■■□□□ 1.1
CLSTN3-214ENST00000542663 LRP2BPQ9P2M1 347 aa21.94■■□□□ 1.1
CLSTN3-214ENST00000542663 XRCC5P13010 732 aaKnown RBP21.93■■□□□ 1.1
CLSTN3-214ENST00000542663 LRIT3Q3SXY7 679 aa21.93■■□□□ 1.1
CLSTN3-214ENST00000542663 Q7L0L9 218 aa21.93■■□□□ 1.1
CLSTN3-214ENST00000542663 UNC80Q8N2C7 3258 aa21.93■■□□□ 1.1
CLSTN3-214ENST00000542663 USP6NLQ92738 828 aa21.93■■□□□ 1.1
CLSTN3-214ENST00000542663 NUDT12Q9BQG2 462 aa21.93■■□□□ 1.1
CLSTN3-214ENST00000542663 TMOD4Q9NZQ9 345 aa21.93■■□□□ 1.1
CLSTN3-214ENST00000542663 RBPJLQ9UBG7 517 aa21.93■■□□□ 1.1
CLSTN3-214ENST00000542663 LAMA2P24043 3122 aaKnown RBP21.92■■□□□ 1.1
CLSTN3-214ENST00000542663 FLT1P17948 1338 aa21.92■■□□□ 1.1
CLSTN3-214ENST00000542663 UQCRFS1P1P0C7P4 283 aa21.92■■□□□ 1.1
CLSTN3-214ENST00000542663 COL6A1P12109 1028 aa21.92■■□□□ 1.1
CLSTN3-214ENST00000542663 Q3C1V9 767 aa21.92■■□□□ 1.1
CLSTN3-214ENST00000542663 MAPKAPK5Q8IW41 473 aa21.92■■□□□ 1.1
CLSTN3-214ENST00000542663 TDHQ8IZJ6 230 aa21.92■■□□□ 1.1
CLSTN3-214ENST00000542663 DEFB123Q8N688 67 aa21.92■■□□□ 1.1
CLSTN3-214ENST00000542663 GPRC5AQ8NFJ5 357 aa21.92■■□□□ 1.1
CLSTN3-214ENST00000542663 TGFBRAP1Q8WUH2 860 aa21.92■■□□□ 1.1
CLSTN3-214ENST00000542663 SOCS4Q8WXH5 440 aa21.92■■□□□ 1.1
CLSTN3-214ENST00000542663 PORCNQ9H237 461 aa21.92■■□□□ 1.1
CLSTN3-214ENST00000542663 SNRKQ9NRH2 765 aa21.92■■□□□ 1.1
CLSTN3-214ENST00000542663 TNNQ9UQP3 1299 aa21.92■■□□□ 1.1
CLSTN3-214ENST00000542663 C19orf81C9J6K1 198 aa21.91■■□□□ 1.1
CLSTN3-214ENST00000542663 GDF11O95390 407 aa21.91■■□□□ 1.1
CLSTN3-214ENST00000542663 PPP4CP60510 307 aa21.91■■□□□ 1.1
CLSTN3-214ENST00000542663 CACNB2Q08289 660 aaPredicted RBP21.91■■□□□ 1.1
CLSTN3-214ENST00000542663 NAA16Q6N069 864 aaPredicted RBP21.91■■□□□ 1.1
CLSTN3-214ENST00000542663 NOL10Q9BSC4 688 aaKnown RBP21.91■■□□□ 1.1
CLSTN3-214ENST00000542663 PALD1Q9ULE6 856 aa21.91■■□□□ 1.1
CLSTN3-214ENST00000542663 LTBP2Q14767 1821 aa21.91■■□□□ 1.1
CLSTN3-214ENST00000542663 USP17L10C9JJH3 530 aa21.9■■□□□ 1.1
CLSTN3-214ENST00000542663 ERVK-9P63128 1117 aa21.9■■□□□ 1.1
CLSTN3-214ENST00000542663 ERVK-24P63145 666 aa21.9■■□□□ 1.1
CLSTN3-214ENST00000542663 CCL14Q16627 93 aa21.9■■□□□ 1.1
CLSTN3-214ENST00000542663 MORN1Q5T089 497 aa21.9■■□□□ 1.1
CLSTN3-214ENST00000542663 LHX8Q68G74 356 aa21.9■■□□□ 1.1
CLSTN3-214ENST00000542663 FOXP4Q8IVH2 680 aaPredicted RBP21.9■■□□□ 1.1
CLSTN3-214ENST00000542663 ZBTB21Q9ULJ3 1066 aa21.9■■□□□ 1.1
CLSTN3-214ENST00000542663 RLFQ13129 1914 aa21.89■■□□□ 1.09
CLSTN3-214ENST00000542663 BAG3O95817 575 aa21.89■■□□□ 1.09
CLSTN3-214ENST00000542663 PLCG2P16885 1265 aa21.89■■□□□ 1.09
CLSTN3-214ENST00000542663 CCND3P30281 292 aaPredicted RBP21.89■■□□□ 1.09
CLSTN3-214ENST00000542663 MAPK4P31152 587 aa21.89■■□□□ 1.09
CLSTN3-214ENST00000542663 G3BP1Q13283 466 aaKnown RBP eCLIP21.89■■□□□ 1.09
CLSTN3-214ENST00000542663 GPR142Q7Z601 462 aa21.89■■□□□ 1.09
CLSTN3-214ENST00000542663 EMILIN3Q9NT22 766 aa21.89■■□□□ 1.09
CLSTN3-214ENST00000542663 GNAI2P04899 355 aa21.88■■□□□ 1.09
CLSTN3-214ENST00000542663 CYP2E1P05181 493 aaPredicted RBP21.88■■□□□ 1.09
CLSTN3-214ENST00000542663 TRIM27P14373 513 aa21.88■■□□□ 1.09
CLSTN3-214ENST00000542663 ZKSCAN1P17029 563 aaPredicted RBP21.88■■□□□ 1.09
CLSTN3-214ENST00000542663 TRMT44Q8IYL2 757 aaKnown RBP21.88■■□□□ 1.09
CLSTN3-214ENST00000542663 CRACR2BQ8N4Y2 399 aaPredicted RBP21.88■■□□□ 1.09
CLSTN3-214ENST00000542663 UBE2OQ9C0C9 1292 aaKnown RBP21.88■■□□□ 1.09
CLSTN3-214ENST00000542663 GINM1Q9NU53 330 aa21.88■■□□□ 1.09
CLSTN3-214ENST00000542663 MTMR10Q9NXD2 777 aa21.88■■□□□ 1.09
CLSTN3-214ENST00000542663 PDE3AQ14432 1141 aa21.87■■□□□ 1.09
CLSTN3-214ENST00000542663 LRRC26Q2I0M4 334 aa21.87■■□□□ 1.09
CLSTN3-214ENST00000542663 DBNDD2Q9BQY9 259 aa21.87■■□□□ 1.09
CLSTN3-214ENST00000542663 PAGR1Q9BTK6 254 aa21.87■■□□□ 1.09
CLSTN3-214ENST00000542663 NAV1Q8NEY1 1877 aa21.87■■□□□ 1.09
CLSTN3-214ENST00000542663 CUL9Q8IWT3 2517 aa21.86■■□□□ 1.09
CLSTN3-214ENST00000542663 MYH8P13535 1937 aa21.86■■□□□ 1.09
CLSTN3-214ENST00000542663 RGS2P41220 211 aa21.86■■□□□ 1.09
CLSTN3-214ENST00000542663 TNNI3KQ59H18 835 aa21.86■■□□□ 1.09
CLSTN3-214ENST00000542663 TTC39AQ5SRH9 613 aa21.86■■□□□ 1.09
CLSTN3-214ENST00000542663 PLEKHH3Q7Z736 793 aa21.86■■□□□ 1.09
CLSTN3-214ENST00000542663 APBA2Q99767 749 aa21.86■■□□□ 1.09
CLSTN3-214ENST00000542663 GPR108Q9NPR9 543 aa21.86■■□□□ 1.09
CLSTN3-214ENST00000542663 SAP30BPQ9UHR5 308 aaKnown RBP21.86■■□□□ 1.09
CLSTN3-214ENST00000542663 STXBP5LQ9Y2K9 1186 aa21.86■■□□□ 1.09
CLSTN3-214ENST00000542663 FPGT-TNNI3KV9GXZ4 949 aa21.86■■□□□ 1.09
CLSTN3-214ENST00000542663 CNMDO75829 334 aa21.85■■□□□ 1.09
CLSTN3-214ENST00000542663 DYNLL1P63167 89 aaKnown RBP21.85■■□□□ 1.09
CLSTN3-214ENST00000542663 PIH1D3Q9NQM4 214 aaKnown RBP21.85■■□□□ 1.09
CLSTN3-214ENST00000542663 POLA2Q14181 598 aa21.84■■□□□ 1.09
CLSTN3-214ENST00000542663 USP17L2Q6R6M4 530 aa21.84■■□□□ 1.09
CLSTN3-214ENST00000542663 GTF3C2Q8WUA4 911 aaPredicted RBP21.84■■□□□ 1.09
CLSTN3-214ENST00000542663 TRIM34Q9BYJ4 488 aa21.84■■□□□ 1.09
CLSTN3-214ENST00000542663 PARP14Q460N5 1801 aa21.84■■□□□ 1.09
CLSTN3-214ENST00000542663 ZNF236Q9UL36 1845 aa21.84■■□□□ 1.09
CLSTN3-214ENST00000542663 ZNFX1Q9P2E3 1918 aaKnown RBP21.84■■□□□ 1.09
CLSTN3-214ENST00000542663 A0A0G2JMZ2 1700 aa21.83■■□□□ 1.09
CLSTN3-214ENST00000542663 GH2P01242 217 aa21.83■■□□□ 1.09
CLSTN3-214ENST00000542663 ZAP70P43403 619 aa21.83■■□□□ 1.09
CLSTN3-214ENST00000542663 CCDC158Q5M9N0 1113 aa21.83■■□□□ 1.09
CLSTN3-214ENST00000542663 ATF7IPQ6VMQ6 1270 aa21.83■■□□□ 1.09
CLSTN3-214ENST00000542663 CCAR1Q8IX12 1150 aaKnown RBP21.83■■□□□ 1.09
CLSTN3-214ENST00000542663 ZNF512BQ96KM6 892 aaPredicted RBP21.83■■□□□ 1.09
CLSTN3-214ENST00000542663 C12orf42Q96LP6 360 aa21.83■■□□□ 1.09
CLSTN3-214ENST00000542663 FLRT1Q9NZU1 646 aa21.83■■□□□ 1.09
CLSTN3-214ENST00000542663 EYSQ5T1H1 3165 aa21.83■■□□□ 1.09
CLSTN3-214ENST00000542663 MDM2Q00987 491 aaPredicted RBP21.82■■□□□ 1.08
CLSTN3-214ENST00000542663 MAP2K5Q13163 448 aa21.82■■□□□ 1.08
CLSTN3-214ENST00000542663 TATDN1Q6P1N9 297 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms