RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 LRRC37AA6NMS7 1700 aa12.5□□□□□ -0.41
NECAP1-206ENST00000542095 OFD1O75665 1012 aa12.49□□□□□ -0.41
NECAP1-206ENST00000542095 BBOX1O75936 387 aa12.49□□□□□ -0.41
NECAP1-206ENST00000542095 UFL1O94874 794 aa12.49□□□□□ -0.41
NECAP1-206ENST00000542095 TRIM37O94972 964 aa12.49□□□□□ -0.41
NECAP1-206ENST00000542095 BAG3O95817 575 aa12.49□□□□□ -0.41
NECAP1-206ENST00000542095 LDHCP07864 332 aa12.49□□□□□ -0.41
NECAP1-206ENST00000542095 USP5P45974 858 aa12.49□□□□□ -0.41
NECAP1-206ENST00000542095 IQCB1Q15051 598 aa12.49□□□□□ -0.41
NECAP1-206ENST00000542095 ZRSR1Q15695 479 aaKnown RBP12.49□□□□□ -0.41
NECAP1-206ENST00000542095 RILPL1Q5EBL4 403 aa12.49□□□□□ -0.41
NECAP1-206ENST00000542095 C11orf57Q6ZUT1 292 aaPredicted RBP12.49□□□□□ -0.41
NECAP1-206ENST00000542095 TIGD1Q96MW7 591 aa12.49□□□□□ -0.41
NECAP1-206ENST00000542095 NAT10Q9H0A0 1025 aaKnown RBP12.49□□□□□ -0.41
NECAP1-206ENST00000542095 PRPF3O43395 683 aaKnown RBP12.49□□□□□ -0.41
NECAP1-206ENST00000542095 CUTAO60888 179 aa12.49□□□□□ -0.41
NECAP1-206ENST00000542095 CYP2D6P10635 497 aa12.49□□□□□ -0.41
NECAP1-206ENST00000542095 TROAPQ12815 778 aa12.49□□□□□ -0.41
NECAP1-206ENST00000542095 AMOTL1Q8IY63 956 aa12.49□□□□□ -0.41
NECAP1-206ENST00000542095 CEP57L1Q8IYX8 460 aa12.49□□□□□ -0.41
NECAP1-206ENST00000542095 KIAA1468Q9P260 1216 aa12.49□□□□□ -0.41
NECAP1-206ENST00000542095 MROH7-TTC4A0A0A0MT08 1334 aa12.49□□□□□ -0.41
NECAP1-206ENST00000542095 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.48□□□□□ -0.41
NECAP1-206ENST00000542095 TSPY2A6NKD2 308 aa12.48□□□□□ -0.41
NECAP1-206ENST00000542095 SYKP43405 635 aa12.48□□□□□ -0.41
NECAP1-206ENST00000542095 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.48□□□□□ -0.41
NECAP1-206ENST00000542095 SLC51AQ86UW1 340 aa12.48□□□□□ -0.41
NECAP1-206ENST00000542095 CERS3Q8IU89 383 aa12.48□□□□□ -0.41
NECAP1-206ENST00000542095 MPNDQ8N594 471 aa12.48□□□□□ -0.41
NECAP1-206ENST00000542095 CTCFLQ8NI51 663 aaPredicted RBP12.48□□□□□ -0.41
NECAP1-206ENST00000542095 NAP1L5Q96NT1 182 aaPredicted RBP12.48□□□□□ -0.41
NECAP1-206ENST00000542095 TRIM5Q9C035 493 aa12.48□□□□□ -0.41
NECAP1-206ENST00000542095 CD209Q9NNX6 404 aa12.48□□□□□ -0.41
NECAP1-206ENST00000542095 FAM237AA0A1B0GTK4 181 aa12.48□□□□□ -0.41
NECAP1-206ENST00000542095 BECN2A8MW95 431 aa12.48□□□□□ -0.41
NECAP1-206ENST00000542095 HOXA10P31260 410 aaPredicted RBP12.48□□□□□ -0.41
NECAP1-206ENST00000542095 PPP4CP60510 307 aa12.48□□□□□ -0.41
NECAP1-206ENST00000542095 FAM47AQ5JRC9 791 aa12.48□□□□□ -0.41
NECAP1-206ENST00000542095 RESP18Q5W5W9 173 aa12.48□□□□□ -0.41
NECAP1-206ENST00000542095 GPR101Q96P66 508 aaPredicted RBP12.48□□□□□ -0.41
NECAP1-206ENST00000542095 CRAMP1Q96RY5 1269 aa12.48□□□□□ -0.41
NECAP1-206ENST00000542095 HPSEQ9Y251 543 aa12.48□□□□□ -0.41
NECAP1-206ENST00000542095 ANKRD31Q8N7Z5 1873 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 LTBP1Q14766 1721 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 POLRMTO00411 1230 aaKnown RBP12.47□□□□□ -0.41
NECAP1-206ENST00000542095 USP17L8P0C7I0 530 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 IL1R1P14778 569 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 ZNF75DP51815 510 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 EVX2Q03828 476 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 DDR1Q08345 913 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 FUT2Q10981 343 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 C12orf60Q5U649 245 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 SHC4Q6S5L8 630 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 TMTC3Q6ZXV5 915 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 PLA2G4DQ86XP0 818 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 KRI1Q8N9T8 703 aaKnown RBP12.47□□□□□ -0.41
NECAP1-206ENST00000542095 SPC24Q8NBT2 197 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 SH3RF3Q8TEJ3 882 aaPredicted RBP12.47□□□□□ -0.41
NECAP1-206ENST00000542095 ZNF830Q96NB3 372 aaPredicted RBP12.47□□□□□ -0.41
NECAP1-206ENST00000542095 TTC12Q9H892 705 aaPredicted RBP12.47□□□□□ -0.41
NECAP1-206ENST00000542095 PODXL2Q9NZ53 605 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 MKRN1Q9UHC7 482 aaKnown RBP12.47□□□□□ -0.41
NECAP1-206ENST00000542095 CEP131Q9UPN4 1083 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 ROBO3Q96MS0 1386 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 MYH1P12882 1939 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 PLEKHA8P1O95397 391 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 TOB1P50616 345 aaPredicted RBP12.47□□□□□ -0.41
NECAP1-206ENST00000542095 RBM6P78332 1123 aaKnown RBP12.47□□□□□ -0.41
NECAP1-206ENST00000542095 PKN1Q16512 942 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 SARM1Q6SZW1 724 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 TMC4Q7Z404 712 aa12.47□□□□□ -0.41
NECAP1-206ENST00000542095 ERCC4Q92889 916 aaPredicted RBP12.47□□□□□ -0.41
NECAP1-206ENST00000542095 NMT2O60551 498 aa12.46□□□□□ -0.41
NECAP1-206ENST00000542095 PRKCSHP14314 528 aaPredicted RBP12.46□□□□□ -0.41
NECAP1-206ENST00000542095 KRT2P35908 639 aa12.46□□□□□ -0.41
NECAP1-206ENST00000542095 NR5A1Q13285 461 aa12.46□□□□□ -0.41
NECAP1-206ENST00000542095 DIXDC1Q155Q3 683 aa12.46□□□□□ -0.41
NECAP1-206ENST00000542095 TXNRD1Q16881 649 aa12.46□□□□□ -0.41
NECAP1-206ENST00000542095 PHF20Q9BVI0 1012 aa12.46□□□□□ -0.41
NECAP1-206ENST00000542095 BRMS1Q9HCU9 246 aa12.46□□□□□ -0.41
NECAP1-206ENST00000542095 VPS54Q9P1Q0 977 aa12.46□□□□□ -0.41
NECAP1-206ENST00000542095 V9GY48 417 aaPredicted RBP12.46□□□□□ -0.41
NECAP1-206ENST00000542095 FOCADQ5VW36 1801 aa12.46□□□□□ -0.41
NECAP1-206ENST00000542095 DDX60LQ5H9U9 1706 aaKnown RBP12.46□□□□□ -0.42
NECAP1-206ENST00000542095 NRXN2Q9P2S2 1712 aa12.46□□□□□ -0.42
NECAP1-206ENST00000542095 CNTNAP5Q8WYK1 1306 aa12.45□□□□□ -0.42
NECAP1-206ENST00000542095 KLRG2A4D1S0 409 aaPredicted RBP12.45□□□□□ -0.42
NECAP1-206ENST00000542095 GRIK5Q16478 980 aa12.45□□□□□ -0.42
NECAP1-206ENST00000542095 CCDC178Q5BJE1 867 aa12.45□□□□□ -0.42
NECAP1-206ENST00000542095 DHX40Q8IX18 779 aaKnown RBP12.45□□□□□ -0.42
NECAP1-206ENST00000542095 DRC7Q8IY82 874 aa12.45□□□□□ -0.42
NECAP1-206ENST00000542095 CLIC6Q96NY7 704 aa12.45□□□□□ -0.42
NECAP1-206ENST00000542095 CDC25BP30305 580 aa12.45□□□□□ -0.42
NECAP1-206ENST00000542095 KIF5BP33176 963 aa12.45□□□□□ -0.42
NECAP1-206ENST00000542095 NLRP12P59046 1061 aa12.45□□□□□ -0.42
NECAP1-206ENST00000542095 SLF2Q8IX21 1173 aa12.45□□□□□ -0.42
NECAP1-206ENST00000542095 TBC1D16Q8TBP0 767 aa12.45□□□□□ -0.42
NECAP1-206ENST00000542095 OXER1Q8TDS5 423 aa12.45□□□□□ -0.42
NECAP1-206ENST00000542095 TGFBRAP1Q8WUH2 860 aa12.45□□□□□ -0.42
NECAP1-206ENST00000542095 PIBF1Q8WXW3 757 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms