RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 ATRNO75882 1429 aa7.37□□□□□ -1.23
CPSF7-220ENST00000541963 USP6P35125 1406 aa7.37□□□□□ -1.23
CPSF7-220ENST00000541963 KTN1Q86UP2 1357 aaKnown RBP7.37□□□□□ -1.23
CPSF7-220ENST00000541963 TTC21BQ7Z4L5 1316 aa7.37□□□□□ -1.23
CPSF7-220ENST00000541963 GCP02774 474 aa7.37□□□□□ -1.23
CPSF7-220ENST00000541963 RNFT1Q5M7Z0 435 aa7.37□□□□□ -1.23
CPSF7-220ENST00000541963 KANK3Q6NY19 840 aa7.37□□□□□ -1.23
CPSF7-220ENST00000541963 FAM117BQ6P1L5 589 aa7.37□□□□□ -1.23
CPSF7-220ENST00000541963 NUDT8Q8WV74 236 aa7.37□□□□□ -1.23
CPSF7-220ENST00000541963 LPIN3Q9BQK8 851 aa7.37□□□□□ -1.23
CPSF7-220ENST00000541963 JPH1Q9HDC5 661 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-220ENST00000541963 USP47Q96K76 1375 aa7.36□□□□□ -1.23
CPSF7-220ENST00000541963 NINLQ9Y2I6 1382 aa7.36□□□□□ -1.23
CPSF7-220ENST00000541963 EPXP11678 715 aa7.36□□□□□ -1.23
CPSF7-220ENST00000541963 AMPD1P23109 780 aa7.36□□□□□ -1.23
CPSF7-220ENST00000541963 ARL4DP49703 201 aa7.36□□□□□ -1.23
CPSF7-220ENST00000541963 NAALADL2Q58DX5 795 aa7.36□□□□□ -1.23
CPSF7-220ENST00000541963 VPS37DQ86XT2 251 aa7.36□□□□□ -1.23
CPSF7-220ENST00000541963 GALNT6Q8NCL4 622 aa7.36□□□□□ -1.23
CPSF7-220ENST00000541963 EDARADDQ8WWZ3 215 aa7.36□□□□□ -1.23
CPSF7-220ENST00000541963 TESK2Q96S53 571 aa7.36□□□□□ -1.23
CPSF7-220ENST00000541963 RSRP1Q9BUV0 290 aa7.36□□□□□ -1.23
CPSF7-220ENST00000541963 ADAM19Q9H013 955 aa7.36□□□□□ -1.23
CPSF7-220ENST00000541963 MUC3BQ9H195 1237 aa7.36□□□□□ -1.23
CPSF7-220ENST00000541963 SLC12A5Q9H2X9 1139 aa7.36□□□□□ -1.23
CPSF7-220ENST00000541963 ZNF576Q9H609 170 aa7.36□□□□□ -1.23
CPSF7-220ENST00000541963 CAPN10Q9HC96 672 aa7.36□□□□□ -1.23
CPSF7-220ENST00000541963 USP35Q9P2H5 1018 aa7.36□□□□□ -1.23
CPSF7-220ENST00000541963 NWD2Q9ULI1 1742 aa7.35□□□□□ -1.23
CPSF7-220ENST00000541963 KIAA0232Q92628 1395 aa7.35□□□□□ -1.23
CPSF7-220ENST00000541963 ERBB4Q15303 1308 aa7.35□□□□□ -1.23
CPSF7-220ENST00000541963 LILRB5O75023 590 aa7.35□□□□□ -1.23
CPSF7-220ENST00000541963 FBXO24O75426 580 aa7.35□□□□□ -1.23
CPSF7-220ENST00000541963 GBP2P32456 591 aaPredicted RBP7.35□□□□□ -1.23
CPSF7-220ENST00000541963 PCDH1Q08174 1060 aa7.35□□□□□ -1.23
CPSF7-220ENST00000541963 IKBKEQ14164 716 aa7.35□□□□□ -1.23
CPSF7-220ENST00000541963 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.35□□□□□ -1.23
CPSF7-220ENST00000541963 IL22RA1Q8N6P7 574 aa7.35□□□□□ -1.23
CPSF7-220ENST00000541963 SEC31BQ9NQW1 1179 aa7.35□□□□□ -1.23
CPSF7-220ENST00000541963 TMEM39AQ9NV64 488 aa7.35□□□□□ -1.23
CPSF7-220ENST00000541963 DDX41Q9UJV9 622 aaKnown RBP7.35□□□□□ -1.23
CPSF7-220ENST00000541963 NAGPAQ9UK23 515 aa7.35□□□□□ -1.23
CPSF7-220ENST00000541963 TRIM33Q9UPN9 1127 aa7.35□□□□□ -1.23
CPSF7-220ENST00000541963 INPP5FQ9Y2H2 1132 aa7.35□□□□□ -1.23
CPSF7-220ENST00000541963 COL14A1Q05707 1796 aaKnown RBP7.35□□□□□ -1.23
CPSF7-220ENST00000541963 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.35□□□□□ -1.23
CPSF7-220ENST00000541963 CPSF1Q10570 1443 aaKnown RBP7.35□□□□□ -1.23
CPSF7-220ENST00000541963 CPDO75976 1380 aa7.34□□□□□ -1.23
CPSF7-220ENST00000541963 USP19O94966 1318 aa7.34□□□□□ -1.23
CPSF7-220ENST00000541963 CHRNA2Q15822 529 aa7.34□□□□□ -1.23
CPSF7-220ENST00000541963 MAP3K11Q16584 847 aa7.34□□□□□ -1.23
CPSF7-220ENST00000541963 ZNF394Q53GI3 561 aa7.34□□□□□ -1.23
CPSF7-220ENST00000541963 ACDQ96AP0 544 aa7.34□□□□□ -1.23
CPSF7-220ENST00000541963 NECAB3Q96P71 396 aaPredicted RBP7.34□□□□□ -1.23
CPSF7-220ENST00000541963 SH2B1Q9NRF2 756 aaPredicted RBP7.34□□□□□ -1.23
CPSF7-220ENST00000541963 PPME1Q9Y570 386 aa7.34□□□□□ -1.23
CPSF7-220ENST00000541963 SSH2Q76I76 1423 aa7.34□□□□□ -1.23
CPSF7-220ENST00000541963 ABCA3Q99758 1704 aa7.33□□□□□ -1.24
CPSF7-220ENST00000541963 BCRP11274 1271 aa7.33□□□□□ -1.24
CPSF7-220ENST00000541963 ZNF157P51786 506 aaPredicted RBP7.33□□□□□ -1.24
CPSF7-220ENST00000541963 MAP3K10Q02779 954 aa7.33□□□□□ -1.24
CPSF7-220ENST00000541963 RAD51AP2Q09MP3 1159 aa7.33□□□□□ -1.24
CPSF7-220ENST00000541963 SF3A1Q15459 793 aaKnown RBP7.33□□□□□ -1.24
CPSF7-220ENST00000541963 ERMP1Q7Z2K6 904 aa7.33□□□□□ -1.24
CPSF7-220ENST00000541963 MDFIQ99750 246 aa7.33□□□□□ -1.24
CPSF7-220ENST00000541963 LRRC4BQ9NT99 713 aa7.33□□□□□ -1.24
CPSF7-220ENST00000541963 KBTBD4Q9NVX7 518 aa7.33□□□□□ -1.24
CPSF7-220ENST00000541963 SOX13Q9UN79 622 aa7.33□□□□□ -1.24
CPSF7-220ENST00000541963 PCDHGB7Q9Y5F8 929 aa7.33□□□□□ -1.24
CPSF7-220ENST00000541963 RGS12O14924 1447 aa7.33□□□□□ -1.24
CPSF7-220ENST00000541963 AKAP12Q02952 1782 aa7.33□□□□□ -1.24
CPSF7-220ENST00000541963 SPATA31A5Q5VU36 1347 aa7.32□□□□□ -1.24
CPSF7-220ENST00000541963 SPATA31A7Q8IWB4 1347 aa7.32□□□□□ -1.24
CPSF7-220ENST00000541963 PLCH1Q4KWH8 1693 aa7.32□□□□□ -1.24
CPSF7-220ENST00000541963 PHRF1Q9P1Y6 1649 aaKnown RBP7.32□□□□□ -1.24
CPSF7-220ENST00000541963 MINDY4BA8MYZ0 360 aa7.32□□□□□ -1.24
CPSF7-220ENST00000541963 HNRNPUQ00839 825 aaKnown RBP eCLIP7.32□□□□□ -1.24
CPSF7-220ENST00000541963 LRRC14Q15048 493 aa7.32□□□□□ -1.24
CPSF7-220ENST00000541963 KRT27Q7Z3Y8 459 aa7.32□□□□□ -1.24
CPSF7-220ENST00000541963 WFDC8Q8IUA0 241 aa7.32□□□□□ -1.24
CPSF7-220ENST00000541963 COG3Q96JB2 828 aa7.32□□□□□ -1.24
CPSF7-220ENST00000541963 BTBD6Q96KE9 485 aa7.32□□□□□ -1.24
CPSF7-220ENST00000541963 TMEM74Q96NL1 305 aa7.32□□□□□ -1.24
CPSF7-220ENST00000541963 EMILIN2Q9BXX0 1053 aa7.32□□□□□ -1.24
CPSF7-220ENST00000541963 ACBD3Q9H3P7 528 aa7.32□□□□□ -1.24
CPSF7-220ENST00000541963 ENAMQ9NRM1 1142 aa7.32□□□□□ -1.24
CPSF7-220ENST00000541963 THRAP3Q9Y2W1 955 aaKnown RBP7.32□□□□□ -1.24
CPSF7-220ENST00000541963 EDC4Q6P2E9 1401 aaKnown RBP7.32□□□□□ -1.24
CPSF7-220ENST00000541963 AATKQ6ZMQ8 1374 aa7.32□□□□□ -1.24
CPSF7-220ENST00000541963 SPATA31A1Q5TZJ5 1347 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 H3BRJ5 948 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 M0R082 166 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 OIP5O43482 229 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 B3GALT4O96024 378 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 CELA3AP09093 270 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 CDC25BP30305 580 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 LIG3P49916 1009 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 TTBK2Q6IQ55 1244 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 CHSY3Q70JA7 882 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 VN1R5Q7Z5H4 357 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms