RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 GABPB1Q06547 395 aaPredicted RBP16.96■□□□□ 0.3
HMGA2-210ENST00000541363 HP1BP3Q5SSJ5 553 aaPredicted RBP16.96■□□□□ 0.3
HMGA2-210ENST00000541363 RLBP1P12271 317 aa16.95■□□□□ 0.3
HMGA2-210ENST00000541363 POGZQ7Z3K3 1410 aa16.95■□□□□ 0.3
HMGA2-210ENST00000541363 ITKQ08881 620 aa16.95■□□□□ 0.3
HMGA2-210ENST00000541363 HOMER3Q9NSC5 361 aa16.95■□□□□ 0.3
HMGA2-210ENST00000541363 PAG1Q9NWQ8 432 aa16.95■□□□□ 0.3
HMGA2-210ENST00000541363 SBNO2Q9Y2G9 1366 aa16.95■□□□□ 0.3
HMGA2-210ENST00000541363 LMNB1P20700 586 aa16.95■□□□□ 0.3
HMGA2-210ENST00000541363 PICK1Q9NRD5 415 aa16.95■□□□□ 0.3
HMGA2-210ENST00000541363 SCINQ9Y6U3 715 aa16.95■□□□□ 0.3
HMGA2-210ENST00000541363 KRT19P08727 400 aa16.95■□□□□ 0.3
HMGA2-210ENST00000541363 PEX19P40855 299 aa16.95■□□□□ 0.3
HMGA2-210ENST00000541363 KIAA1107Q9UPP5 1409 aa16.95■□□□□ 0.3
HMGA2-210ENST00000541363 EEF1DP29692 281 aaKnown RBP16.95■□□□□ 0.3
HMGA2-210ENST00000541363 LETM2Q2VYF4 491 aa16.95■□□□□ 0.3
HMGA2-210ENST00000541363 MAGEB6Q8N7X4 407 aa16.95■□□□□ 0.3
HMGA2-210ENST00000541363 TYW1Q9NV66 732 aaKnown RBP16.95■□□□□ 0.3
HMGA2-210ENST00000541363 PPARDQ03181 441 aa16.95■□□□□ 0.3
HMGA2-210ENST00000541363 BEND3Q5T5X7 828 aa16.95■□□□□ 0.3
HMGA2-210ENST00000541363 ANAPC5Q9UJX4 755 aa16.95■□□□□ 0.3
HMGA2-210ENST00000541363 OAS2P29728 719 aaKnown RBP16.94■□□□□ 0.3
HMGA2-210ENST00000541363 DNM2P50570 870 aa16.94■□□□□ 0.3
HMGA2-210ENST00000541363 WAPLQ7Z5K2 1190 aa16.94■□□□□ 0.3
HMGA2-210ENST00000541363 NGLY1Q96IV0 654 aa16.94■□□□□ 0.3
HMGA2-210ENST00000541363 MYCBPQ99417 103 aaPredicted RBP16.94■□□□□ 0.3
HMGA2-210ENST00000541363 SNCBQ16143 134 aa16.94■□□□□ 0.3
HMGA2-210ENST00000541363 MED10Q9BTT4 135 aa16.94■□□□□ 0.3
HMGA2-210ENST00000541363 MYO1AQ9UBC5 1043 aa16.94■□□□□ 0.3
HMGA2-210ENST00000541363 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.94■□□□□ 0.3
HMGA2-210ENST00000541363 RAB44Q7Z6P3 723 aaPredicted RBP16.94■□□□□ 0.3
HMGA2-210ENST00000541363 TEKT1Q969V4 418 aa16.94■□□□□ 0.3
HMGA2-210ENST00000541363 LONRF2Q1L5Z9 754 aa16.94■□□□□ 0.3
HMGA2-210ENST00000541363 ANKRD35Q8N283 1001 aa16.94■□□□□ 0.3
HMGA2-210ENST00000541363 CSGALNACT2Q8N6G5 542 aa16.94■□□□□ 0.3
HMGA2-210ENST00000541363 GOLGA8KD6RF30 607 aa16.94■□□□□ 0.3
HMGA2-210ENST00000541363 ESYT1Q9BSJ8 1104 aa16.94■□□□□ 0.3
HMGA2-210ENST00000541363 IMPACTQ9P2X3 320 aa16.94■□□□□ 0.3
HMGA2-210ENST00000541363 SART1O43290 800 aaKnown RBP16.94■□□□□ 0.3
HMGA2-210ENST00000541363 SNRPA1P09661 255 aaKnown RBP16.94■□□□□ 0.3
HMGA2-210ENST00000541363 TRIM27P14373 513 aa16.94■□□□□ 0.3
HMGA2-210ENST00000541363 ECE1P42892 770 aa16.94■□□□□ 0.3
HMGA2-210ENST00000541363 NONOQ15233 471 aaKnown RBP eCLIP16.94■□□□□ 0.3
HMGA2-210ENST00000541363 GSTA4O15217 222 aa16.93■□□□□ 0.3
HMGA2-210ENST00000541363 NUCB1Q02818 461 aa16.93■□□□□ 0.3
HMGA2-210ENST00000541363 PAK1Q13153 545 aa16.93■□□□□ 0.3
HMGA2-210ENST00000541363 PDZD4Q76G19 769 aaPredicted RBP16.93■□□□□ 0.3
HMGA2-210ENST00000541363 NLRP3Q96P20 1036 aa16.93■□□□□ 0.3
HMGA2-210ENST00000541363 POLR3CQ9BUI4 534 aaPredicted RBP16.93■□□□□ 0.3
HMGA2-210ENST00000541363 CSRNP1Q96S65 589 aa16.93■□□□□ 0.3
HMGA2-210ENST00000541363 CTNNA1P35221 906 aaKnown RBP16.93■□□□□ 0.3
HMGA2-210ENST00000541363 PRPSAP1Q14558 356 aa16.93■□□□□ 0.3
HMGA2-210ENST00000541363 ARHGAP6O43182 974 aa16.93■□□□□ 0.3
HMGA2-210ENST00000541363 TMED1Q13445 227 aa16.93■□□□□ 0.3
HMGA2-210ENST00000541363 ZNF174Q15697 407 aa16.93■□□□□ 0.3
HMGA2-210ENST00000541363 SPATS2LQ9NUQ6 558 aaKnown RBP16.93■□□□□ 0.3
HMGA2-210ENST00000541363 AMFRQ9UKV5 643 aa16.93■□□□□ 0.3
HMGA2-210ENST00000541363 SFMBT2Q5VUG0 894 aa16.93■□□□□ 0.3
HMGA2-210ENST00000541363 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.93■□□□□ 0.3
HMGA2-210ENST00000541363 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.93■□□□□ 0.3
HMGA2-210ENST00000541363 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.93■□□□□ 0.3
HMGA2-210ENST00000541363 SDSP20132 328 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 KLHDC4Q8TBB5 520 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 CARD6Q9BX69 1037 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 GLT8D2Q9H1C3 349 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 GIMAP4Q9NUV9 329 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 RAB20Q9NX57 234 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 ATP6V1AP38606 617 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 ABTB1Q969K4 478 aaPredicted RBP16.92■□□□□ 0.3
HMGA2-210ENST00000541363 PPWD1Q96BP3 646 aaKnown RBP16.92■□□□□ 0.3
HMGA2-210ENST00000541363 ARHGEF10LQ9HCE6 1279 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 LRRC9Q6ZRR7 1453 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 EVI5O60447 810 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 TMTC1Q8IUR5 882 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 RHPN1Q8TCX5 695 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 FCHSD1Q86WN1 690 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 NCOA2Q15596 1464 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 GCNT3O95395 438 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 APOBRQ0VD83 1088 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 TSTA3Q13630 321 aaPredicted RBP16.92■□□□□ 0.3
HMGA2-210ENST00000541363 PPP2R5EQ16537 467 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 PI4KAP2A4QPH2 592 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 NOP14P78316 857 aaKnown RBP16.92■□□□□ 0.3
HMGA2-210ENST00000541363 IFNL2Q8IZJ0 200 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 PI4KAP1Q8N8J0 262 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 PAWRQ96IZ0 340 aaKnown RBP16.92■□□□□ 0.3
HMGA2-210ENST00000541363 DDX41Q9UJV9 622 aaKnown RBP16.92■□□□□ 0.3
HMGA2-210ENST00000541363 TRPC6Q9Y210 931 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 ANGPTL3Q9Y5C1 460 aa16.92■□□□□ 0.3
HMGA2-210ENST00000541363 PNMA2Q9UL42 364 aa16.91■□□□□ 0.3
HMGA2-210ENST00000541363 STAM2O75886 525 aa16.91■□□□□ 0.3
HMGA2-210ENST00000541363 ANKRD13DQ6ZTN6 518 aa16.91■□□□□ 0.3
HMGA2-210ENST00000541363 ANLNQ9NQW6 1124 aa16.91■□□□□ 0.3
HMGA2-210ENST00000541363 TTC21BQ7Z4L5 1316 aa16.91■□□□□ 0.3
HMGA2-210ENST00000541363 NPR1P16066 1061 aa16.91■□□□□ 0.3
HMGA2-210ENST00000541363 RAB3GAP1Q15042 981 aa16.91■□□□□ 0.3
HMGA2-210ENST00000541363 PPP2R5AQ15172 486 aa16.91■□□□□ 0.3
HMGA2-210ENST00000541363 IQSEC3Q9UPP2 1182 aaPredicted RBP16.91■□□□□ 0.3
HMGA2-210ENST00000541363 NVLO15381 856 aaKnown RBP16.91■□□□□ 0.3
HMGA2-210ENST00000541363 RBM26Q5T8P6 1007 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms