RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 HLA-DOAP06340 250 aa29.31■■■□□ 2.28
LEMD3-203ENST00000541171 NDUFB9Q9Y6M9 179 aa29.31■■■□□ 2.28
LEMD3-203ENST00000541171 SIPA1L1O43166 1804 aa29.31■■■□□ 2.28
LEMD3-203ENST00000541171 METTL16Q86W50 562 aaKnown RBP29.3■■■□□ 2.28
LEMD3-203ENST00000541171 MIER1Q8N108 512 aa29.3■■■□□ 2.28
LEMD3-203ENST00000541171 MIGA1Q8NAN2 632 aa29.3■■■□□ 2.28
LEMD3-203ENST00000541171 P2RX7Q99572 595 aaKnown RBP29.3■■■□□ 2.28
LEMD3-203ENST00000541171 NR2E3Q9Y5X4 410 aa29.3■■■□□ 2.28
LEMD3-203ENST00000541171 MYO5AQ9Y4I1 1855 aaKnown RBP29.29■■■□□ 2.28
LEMD3-203ENST00000541171 TRIOBPQ9H2D6 2365 aa29.29■■■□□ 2.28
LEMD3-203ENST00000541171 PEX10O60683 326 aa29.29■■■□□ 2.28
LEMD3-203ENST00000541171 PAK6Q9NQU5 681 aaPredicted RBP29.29■■■□□ 2.28
LEMD3-203ENST00000541171 ZBTB21Q9ULJ3 1066 aa29.29■■■□□ 2.28
LEMD3-203ENST00000541171 C19orf81C9J6K1 198 aa29.28■■■□□ 2.28
LEMD3-203ENST00000541171 USP17L10C9JJH3 530 aa29.28■■■□□ 2.28
LEMD3-203ENST00000541171 IGSF3O75054 1194 aa29.28■■■□□ 2.28
LEMD3-203ENST00000541171 USP5P45974 858 aa29.28■■■□□ 2.28
LEMD3-203ENST00000541171 CEP85Q6P2H3 762 aa29.28■■■□□ 2.28
LEMD3-203ENST00000541171 MAGEB6Q8N7X4 407 aa29.28■■■□□ 2.28
LEMD3-203ENST00000541171 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.28■■■□□ 2.28
LEMD3-203ENST00000541171 RBM27Q9P2N5 1060 aaKnown RBP29.28■■■□□ 2.28
LEMD3-203ENST00000541171 GJD2Q9UKL4 321 aa29.28■■■□□ 2.28
LEMD3-203ENST00000541171 EXOC6BQ9Y2D4 811 aa29.28■■■□□ 2.28
LEMD3-203ENST00000541171 ANTXR1Q9H6X2 564 aa29.27■■■□□ 2.28
LEMD3-203ENST00000541171 MORF4L1Q9UBU8 362 aa29.27■■■□□ 2.28
LEMD3-203ENST00000541171 HMGCRP04035 888 aa29.26■■■□□ 2.27
LEMD3-203ENST00000541171 HOXA7P31268 230 aaPredicted RBP29.26■■■□□ 2.27
LEMD3-203ENST00000541171 TRIM32Q13049 653 aa29.26■■■□□ 2.27
LEMD3-203ENST00000541171 GINM1Q9NU53 330 aa29.26■■■□□ 2.27
LEMD3-203ENST00000541171 CDK5RAP2Q96SN8 1893 aa29.25■■■□□ 2.27
LEMD3-203ENST00000541171 HERVK_113P62684 666 aa29.25■■■□□ 2.27
LEMD3-203ENST00000541171 AACSQ86V21 672 aa29.25■■■□□ 2.27
LEMD3-203ENST00000541171 GPRC5AQ8NFJ5 357 aa29.25■■■□□ 2.27
LEMD3-203ENST00000541171 PANK1Q8TE04 598 aa29.25■■■□□ 2.27
LEMD3-203ENST00000541171 PAWRQ96IZ0 340 aaKnown RBP29.25■■■□□ 2.27
LEMD3-203ENST00000541171 CRISPLD2Q9H0B8 497 aa29.25■■■□□ 2.27
LEMD3-203ENST00000541171 TXNRD2Q9NNW7 524 aa29.25■■■□□ 2.27
LEMD3-203ENST00000541171 EVI5O60447 810 aa29.24■■■□□ 2.27
LEMD3-203ENST00000541171 GH2P01242 217 aa29.24■■■□□ 2.27
LEMD3-203ENST00000541171 CYP2B6P20813 491 aa29.24■■■□□ 2.27
LEMD3-203ENST00000541171 CAPN2P17655 700 aa29.23■■■□□ 2.27
LEMD3-203ENST00000541171 MAP3K12Q12852 859 aa29.23■■■□□ 2.27
LEMD3-203ENST00000541171 DIS3LQ8TF46 1054 aaKnown RBP29.23■■■□□ 2.27
LEMD3-203ENST00000541171 EMILIN3Q9NT22 766 aa29.23■■■□□ 2.27
LEMD3-203ENST00000541171 FOCADQ5VW36 1801 aa29.22■■■□□ 2.27
LEMD3-203ENST00000541171 ZYXQ15942 572 aaKnown RBP29.22■■■□□ 2.27
LEMD3-203ENST00000541171 USP17L2Q6R6M4 530 aa29.22■■■□□ 2.27
LEMD3-203ENST00000541171 ERC1Q8IUD2 1116 aa29.22■■■□□ 2.27
LEMD3-203ENST00000541171 PAGR1Q9BTK6 254 aa29.22■■■□□ 2.27
LEMD3-203ENST00000541171 HMX1Q9NP08 348 aaPredicted RBP29.22■■■□□ 2.27
LEMD3-203ENST00000541171 IL1RAPL2Q9NP60 686 aa29.22■■■□□ 2.27
LEMD3-203ENST00000541171 RBPJLQ9UBG7 517 aa29.22■■■□□ 2.27
LEMD3-203ENST00000541171 RPTORQ8N122 1335 aa29.21■■■□□ 2.27
LEMD3-203ENST00000541171 CERS3Q8IU89 383 aa29.21■■■□□ 2.27
LEMD3-203ENST00000541171 CCAR1Q8IX12 1150 aaKnown RBP29.21■■■□□ 2.27
LEMD3-203ENST00000541171 TRIB2Q92519 343 aa29.21■■■□□ 2.27
LEMD3-203ENST00000541171 NUDT12Q9BQG2 462 aa29.21■■■□□ 2.27
LEMD3-203ENST00000541171 Q3C1V9 767 aa29.2■■■□□ 2.26
LEMD3-203ENST00000541171 NECAB2Q7Z6G3 386 aa29.2■■■□□ 2.26
LEMD3-203ENST00000541171 FEZ1Q99689 392 aa29.2■■■□□ 2.26
LEMD3-203ENST00000541171 BCL11AQ9H165 835 aa29.2■■■□□ 2.26
LEMD3-203ENST00000541171 SERPINB13Q9UIV8 391 aa29.2■■■□□ 2.26
LEMD3-203ENST00000541171 TATDN1Q6P1N9 297 aa29.19■■■□□ 2.26
LEMD3-203ENST00000541171 APBB1O00213 710 aa29.18■■■□□ 2.26
LEMD3-203ENST00000541171 ERVK-9P63128 1117 aa29.18■■■□□ 2.26
LEMD3-203ENST00000541171 ERVK-24P63145 666 aa29.18■■■□□ 2.26
LEMD3-203ENST00000541171 RAB3GAP1Q15042 981 aa29.18■■■□□ 2.26
LEMD3-203ENST00000541171 TTC6Q86TZ1 520 aa29.18■■■□□ 2.26
LEMD3-203ENST00000541171 MAPK4P31152 587 aa29.17■■■□□ 2.26
LEMD3-203ENST00000541171 PDE3AQ14432 1141 aa29.17■■■□□ 2.26
LEMD3-203ENST00000541171 CERKLQ49MI3 558 aaPredicted RBP29.17■■■□□ 2.26
LEMD3-203ENST00000541171 RHPN1Q8TCX5 695 aa29.17■■■□□ 2.26
LEMD3-203ENST00000541171 EHD4Q9H223 541 aa29.17■■■□□ 2.26
LEMD3-203ENST00000541171 PORCNQ9H237 461 aa29.17■■■□□ 2.26
LEMD3-203ENST00000541171 MYH1P12882 1939 aa29.17■■■□□ 2.26
LEMD3-203ENST00000541171 ABCB5Q2M3G0 1257 aa29.16■■■□□ 2.26
LEMD3-203ENST00000541171 HSP90AB4PQ58FF6 505 aa29.16■■■□□ 2.26
LEMD3-203ENST00000541171 SOCS4Q8WXH5 440 aa29.16■■■□□ 2.26
LEMD3-203ENST00000541171 PRO3102Q9H379 93 aa29.16■■■□□ 2.26
LEMD3-203ENST00000541171 CWC22Q9HCG8 908 aaKnown RBP29.16■■■□□ 2.26
LEMD3-203ENST00000541171 MAGEB6P1A0A0J9YX57 407 aa29.15■■■□□ 2.26
LEMD3-203ENST00000541171 PRKAR2AP13861 404 aaKnown RBP29.15■■■□□ 2.26
LEMD3-203ENST00000541171 POTEEQ6S8J3 1075 aa29.15■■■□□ 2.26
LEMD3-203ENST00000541171 ANKLE1Q8NAG6 615 aa29.15■■■□□ 2.26
LEMD3-203ENST00000541171 GTF3C2Q8WUA4 911 aaPredicted RBP29.15■■■□□ 2.26
LEMD3-203ENST00000541171 PLXNB2O15031 1838 aa29.15■■■□□ 2.26
LEMD3-203ENST00000541171 USP17L15C9J2P7 530 aa29.14■■■□□ 2.26
LEMD3-203ENST00000541171 USP17L13C9JLJ4 530 aa29.14■■■□□ 2.26
LEMD3-203ENST00000541171 USP17L11C9JVI0 530 aa29.14■■■□□ 2.26
LEMD3-203ENST00000541171 USP17L18D6R9N7 530 aa29.14■■■□□ 2.26
LEMD3-203ENST00000541171 USP17L22D6RA61 530 aa29.14■■■□□ 2.26
LEMD3-203ENST00000541171 USP17L17D6RBQ6 530 aa29.14■■■□□ 2.26
LEMD3-203ENST00000541171 USP17L19D6RCP7 530 aa29.14■■■□□ 2.26
LEMD3-203ENST00000541171 USP17L20D6RJB6 530 aa29.14■■■□□ 2.26
LEMD3-203ENST00000541171 POLR3DP05423 398 aaPredicted RBP29.14■■■□□ 2.26
LEMD3-203ENST00000541171 PLCD1P51178 756 aa29.14■■■□□ 2.26
LEMD3-203ENST00000541171 USP17L24Q0WX57 530 aa29.14■■■□□ 2.26
LEMD3-203ENST00000541171 DIEXFQ68CQ4 756 aaKnown RBP29.14■■■□□ 2.26
LEMD3-203ENST00000541171 GPR142Q7Z601 462 aa29.14■■■□□ 2.26
LEMD3-203ENST00000541171 PLEKHH3Q7Z736 793 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms