RNA–Protein interactions for RNA: ENST00000541157.5

MRE11-210, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 4

Gene MRE11, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-210ENST00000541157 TEX11Q8IYF3 940 aa11.82□□□□□ -0.52
MRE11-210ENST00000541157 INTS4Q96HW7 963 aaKnown RBP11.82□□□□□ -0.52
MRE11-210ENST00000541157 ZDHHC15Q96MV8 337 aa11.82□□□□□ -0.52
MRE11-210ENST00000541157 AGXT2Q9BYV1 514 aa11.82□□□□□ -0.52
MRE11-210ENST00000541157 FHDC1Q9C0D6 1143 aaPredicted RBP11.82□□□□□ -0.52
MRE11-210ENST00000541157 SLKQ9H2G2 1235 aaPredicted RBP11.82□□□□□ -0.52
MRE11-210ENST00000541157 RNF41Q9H4P4 317 aaPredicted RBP11.82□□□□□ -0.52
MRE11-210ENST00000541157 SH2B1Q9NRF2 756 aaPredicted RBP11.82□□□□□ -0.52
MRE11-210ENST00000541157 TACC3Q9Y6A5 838 aa11.82□□□□□ -0.52
MRE11-210ENST00000541157 NAV1Q8NEY1 1877 aa11.82□□□□□ -0.52
MRE11-210ENST00000541157 ADAMTSL1Q8N6G6 1762 aa11.82□□□□□ -0.52
MRE11-210ENST00000541157 MINDY4BA8MYZ0 360 aa11.81□□□□□ -0.52
MRE11-210ENST00000541157 TK2O00142 265 aa11.81□□□□□ -0.52
MRE11-210ENST00000541157 TULP1O00294 542 aaPredicted RBP11.81□□□□□ -0.52
MRE11-210ENST00000541157 PRC1O43663 620 aa11.81□□□□□ -0.52
MRE11-210ENST00000541157 VIL1P09327 827 aaKnown RBP11.81□□□□□ -0.52
MRE11-210ENST00000541157 FGRP09769 529 aa11.81□□□□□ -0.52
MRE11-210ENST00000541157 PCP11498 1178 aaKnown RBP11.81□□□□□ -0.52
MRE11-210ENST00000541157 CRKP46108 304 aa11.81□□□□□ -0.52
MRE11-210ENST00000541157 RSBN1LQ6PCB5 846 aaPredicted RBP11.81□□□□□ -0.52
MRE11-210ENST00000541157 MFSD6Q6ZSS7 791 aa11.81□□□□□ -0.52
MRE11-210ENST00000541157 Q6ZUG5 572 aa11.81□□□□□ -0.52
MRE11-210ENST00000541157 KIAA0825Q8IV33 1275 aa11.81□□□□□ -0.52
MRE11-210ENST00000541157 KRT23Q9C075 422 aa11.81□□□□□ -0.52
MRE11-210ENST00000541157 MCM9Q9NXL9 1143 aa11.81□□□□□ -0.52
MRE11-210ENST00000541157 SERPINA10Q9UK55 444 aa11.81□□□□□ -0.52
MRE11-210ENST00000541157 TPCN1Q9ULQ1 816 aa11.81□□□□□ -0.52
MRE11-210ENST00000541157 VPS9D1Q9Y2B5 631 aa11.81□□□□□ -0.52
MRE11-210ENST00000541157 CDK5RAP2Q96SN8 1893 aa11.8□□□□□ -0.52
MRE11-210ENST00000541157 ROBO3Q96MS0 1386 aa11.8□□□□□ -0.52
MRE11-210ENST00000541157 BAZ2AQ9UIF9 1905 aaKnown RBP11.8□□□□□ -0.52
MRE11-210ENST00000541157 CYP2D7A0A087X1C5 515 aa11.8□□□□□ -0.52
MRE11-210ENST00000541157 B4E1Z4 1266 aa11.8□□□□□ -0.52
MRE11-210ENST00000541157 PSMD14O00487 310 aa11.8□□□□□ -0.52
MRE11-210ENST00000541157 RAD17O75943 681 aa11.8□□□□□ -0.52
MRE11-210ENST00000541157 LARGE1O95461 756 aa11.8□□□□□ -0.52
MRE11-210ENST00000541157 CYP2D6P10635 497 aa11.8□□□□□ -0.52
MRE11-210ENST00000541157 FGD1P98174 961 aa11.8□□□□□ -0.52
MRE11-210ENST00000541157 PROX2Q3B8N5 592 aa11.8□□□□□ -0.52
MRE11-210ENST00000541157 C12orf60Q5U649 245 aa11.8□□□□□ -0.52
MRE11-210ENST00000541157 APOBEC3HQ6NTF7 200 aaKnown RBP11.8□□□□□ -0.52
MRE11-210ENST00000541157 MAPKAPK5Q8IW41 473 aa11.8□□□□□ -0.52
MRE11-210ENST00000541157 TGFBRAP1Q8WUH2 860 aa11.8□□□□□ -0.52
MRE11-210ENST00000541157 JDP2Q8WYK2 163 aa11.8□□□□□ -0.52
MRE11-210ENST00000541157 BRF1Q92994 677 aa11.8□□□□□ -0.52
MRE11-210ENST00000541157 GMLQ99445 158 aa11.8□□□□□ -0.52
MRE11-210ENST00000541157 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.8□□□□□ -0.52
MRE11-210ENST00000541157 FOCADQ5VW36 1801 aa11.8□□□□□ -0.52
MRE11-210ENST00000541157 FLT1P17948 1338 aa11.8□□□□□ -0.52
MRE11-210ENST00000541157 SMIM22K7EJ46 135 aa11.79□□□□□ -0.52
MRE11-210ENST00000541157 ORC4O43929 436 aa11.79□□□□□ -0.52
MRE11-210ENST00000541157 KDM4AO75164 1064 aa11.79□□□□□ -0.52
MRE11-210ENST00000541157 WDHD1O75717 1129 aaPredicted RBP11.79□□□□□ -0.52
MRE11-210ENST00000541157 SLC3A2P08195 630 aaKnown RBP11.79□□□□□ -0.52
MRE11-210ENST00000541157 USP17L8P0C7I0 530 aa11.79□□□□□ -0.52
MRE11-210ENST00000541157 EVCP57679 992 aa11.79□□□□□ -0.52
MRE11-210ENST00000541157 RASSF7Q02833 373 aa11.79□□□□□ -0.52
MRE11-210ENST00000541157 ME3Q16798 604 aa11.79□□□□□ -0.52
MRE11-210ENST00000541157 CDC42EP5Q6NZY7 148 aa11.79□□□□□ -0.52
MRE11-210ENST00000541157 CYB5R4Q7L1T6 521 aa11.79□□□□□ -0.52
MRE11-210ENST00000541157 CHST3Q7LGC8 479 aa11.79□□□□□ -0.52
MRE11-210ENST00000541157 AMOTL1Q8IY63 956 aa11.79□□□□□ -0.52
MRE11-210ENST00000541157 NKX2-3Q8TAU0 364 aa11.79□□□□□ -0.52
MRE11-210ENST00000541157 MTA3Q9BTC8 594 aa11.79□□□□□ -0.52
MRE11-210ENST00000541157 SLC4A5Q9BY07 1137 aa11.79□□□□□ -0.52
MRE11-210ENST00000541157 LRRC2Q9BYS8 371 aa11.79□□□□□ -0.52
MRE11-210ENST00000541157 CWC22Q9HCG8 908 aaKnown RBP11.79□□□□□ -0.52
MRE11-210ENST00000541157 INCENPQ9NQS7 918 aa11.79□□□□□ -0.52
MRE11-210ENST00000541157 USP40Q9NVE5 1235 aa11.79□□□□□ -0.52
MRE11-210ENST00000541157 CHMP5Q9NZZ3 219 aa11.79□□□□□ -0.52
MRE11-210ENST00000541157 SH2B2O14492 632 aaPredicted RBP11.78□□□□□ -0.52
MRE11-210ENST00000541157 NT5C2P49902 561 aa11.78□□□□□ -0.52
MRE11-210ENST00000541157 PRELPP51888 382 aa11.78□□□□□ -0.52
MRE11-210ENST00000541157 CXCL9Q07325 125 aa11.78□□□□□ -0.52
MRE11-210ENST00000541157 ST3GAL1Q11201 340 aa11.78□□□□□ -0.52
MRE11-210ENST00000541157 SPNS2Q8IVW8 549 aa11.78□□□□□ -0.52
MRE11-210ENST00000541157 AGBL3Q8NEM8 1001 aa11.78□□□□□ -0.52
MRE11-210ENST00000541157 ESR2Q92731 530 aa11.78□□□□□ -0.52
MRE11-210ENST00000541157 TMEM87BQ96K49 555 aa11.78□□□□□ -0.52
MRE11-210ENST00000541157 ECM29Q5VYK3 1845 aa11.77□□□□□ -0.52
MRE11-210ENST00000541157 PFKFB2O60825 505 aa11.77□□□□□ -0.53
MRE11-210ENST00000541157 PDE4BQ07343 736 aa11.77□□□□□ -0.53
MRE11-210ENST00000541157 APOBRQ0VD83 1088 aa11.77□□□□□ -0.53
MRE11-210ENST00000541157 TNIP1Q15025 636 aa11.77□□□□□ -0.53
MRE11-210ENST00000541157 CFAP100Q494V2 611 aa11.77□□□□□ -0.53
MRE11-210ENST00000541157 RRP12Q5JTH9 1297 aaKnown RBP11.77□□□□□ -0.53
MRE11-210ENST00000541157 CIAPIN1Q6FI81 312 aa11.77□□□□□ -0.53
MRE11-210ENST00000541157 CCDC83Q8IWF9 413 aa11.77□□□□□ -0.53
MRE11-210ENST00000541157 ZNF274Q96GC6 653 aaPredicted RBP11.77□□□□□ -0.53
MRE11-210ENST00000541157 SYT17Q9BSW7 474 aa11.77□□□□□ -0.53
MRE11-210ENST00000541157 TOMM22Q9NS69 142 aa11.77□□□□□ -0.53
MRE11-210ENST00000541157 ZSWIM5Q9P217 1185 aa11.77□□□□□ -0.53
MRE11-210ENST00000541157 SAP30BPQ9UHR5 308 aaKnown RBP11.77□□□□□ -0.53
MRE11-210ENST00000541157 ANGEL1Q9UNK9 670 aaKnown RBP11.77□□□□□ -0.53
MRE11-210ENST00000541157 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.77□□□□□ -0.53
MRE11-210ENST00000541157 FZD9O00144 591 aa11.76□□□□□ -0.53
MRE11-210ENST00000541157 POLR3DP05423 398 aaPredicted RBP11.76□□□□□ -0.53
MRE11-210ENST00000541157 RBM5P52756 815 aaKnown RBP eCLIP11.76□□□□□ -0.53
MRE11-210ENST00000541157 SART3Q15020 963 aaKnown RBP11.76□□□□□ -0.53
MRE11-210ENST00000541157 TMEM67Q5HYA8 995 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms