RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 ZNF131P52739 623 aa16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 SFMBT2Q5VUG0 894 aa16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 CALUO43852 315 aaPredicted RBP16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 PNOCQ13519 176 aa16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 HHATQ5VTY9 493 aa16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 RPAINQ86UA6 219 aa16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 FAM204AQ9H8W3 233 aa16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 PNMA6EA0A0J9YXQ4 647 aa16.63■□□□□ 0.25
SMARCA4-207ENST00000541122 B4E1Z4 1266 aa16.63■□□□□ 0.25
SMARCA4-207ENST00000541122 EYA2O00167 538 aa16.63■□□□□ 0.25
SMARCA4-207ENST00000541122 IKBKBO14920 756 aa16.63■□□□□ 0.25
SMARCA4-207ENST00000541122 PHLDB3Q6NSJ2 640 aa16.63■□□□□ 0.25
SMARCA4-207ENST00000541122 GBP5Q96PP8 586 aa16.63■□□□□ 0.25
SMARCA4-207ENST00000541122 DENND4BO75064 1496 aaPredicted RBP16.63■□□□□ 0.25
SMARCA4-207ENST00000541122 RGS16O15492 202 aaPredicted RBP16.63■□□□□ 0.25
SMARCA4-207ENST00000541122 LONRF3Q496Y0 759 aa16.63■□□□□ 0.25
SMARCA4-207ENST00000541122 USP28Q96RU2 1077 aa16.63■□□□□ 0.25
SMARCA4-207ENST00000541122 FBXO31Q5XUX0 539 aaPredicted RBP16.63■□□□□ 0.25
SMARCA4-207ENST00000541122 RAB3IL1Q8TBN0 382 aa16.63■□□□□ 0.25
SMARCA4-207ENST00000541122 PLCG2P16885 1265 aa16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 IRX4P78413 519 aa16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 KLHL30Q0D2K2 578 aa16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 NBPF6Q5VWK0 638 aa16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 OTUD7BQ6GQQ9 843 aa16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 VPS52Q8N1B4 723 aa16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 NBPF4Q96M43 638 aa16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 SPDYE3A6NKU9 549 aa16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 ZNF853P0CG23 659 aa16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 DNM2P50570 870 aa16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 TERF2Q15554 542 aa16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 SLFNL1Q499Z3 407 aa16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 PEX26Q7Z412 305 aa16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 APBB1IPQ7Z5R6 666 aaPredicted RBP16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 TRMT44Q8IYL2 757 aaKnown RBP16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 PLIN2Q99541 437 aa16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 KLHL14Q9P2G3 628 aa16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 DESI2Q9BSY9 194 aa16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 OSBPL3Q9H4L5 887 aa16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 CCT5P48643 541 aa16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 MAP7Q14244 749 aa16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 SERTAD1Q9UHV2 236 aa16.62■□□□□ 0.25
SMARCA4-207ENST00000541122 MBD4O95243 580 aa16.61■□□□□ 0.25
SMARCA4-207ENST00000541122 DDX23Q9BUQ8 820 aaKnown RBP16.61■□□□□ 0.25
SMARCA4-207ENST00000541122 PALD1Q9ULE6 856 aa16.61■□□□□ 0.25
SMARCA4-207ENST00000541122 PIK3AP1Q6ZUJ8 805 aa16.61■□□□□ 0.25
SMARCA4-207ENST00000541122 ARMC9Q7Z3E5 817 aa16.61■□□□□ 0.25
SMARCA4-207ENST00000541122 TBC1D31Q96DN5 1066 aa16.61■□□□□ 0.25
SMARCA4-207ENST00000541122 SPATS2LQ9NUQ6 558 aaKnown RBP16.61■□□□□ 0.25
SMARCA4-207ENST00000541122 JRKLQ9Y4A0 524 aa16.61■□□□□ 0.25
SMARCA4-207ENST00000541122 ATP5JP18859 108 aa16.61■□□□□ 0.25
SMARCA4-207ENST00000541122 RNASE9P60153 205 aaKnown RBP16.61■□□□□ 0.25
SMARCA4-207ENST00000541122 SPATA1Q5VX52 437 aa16.61■□□□□ 0.25
SMARCA4-207ENST00000541122 KCNJ18B7U540 433 aa16.61■□□□□ 0.25
SMARCA4-207ENST00000541122 FOXO3O43524 673 aa16.61■□□□□ 0.25
SMARCA4-207ENST00000541122 GNA14O95837 355 aa16.61■□□□□ 0.25
SMARCA4-207ENST00000541122 PSMC4P43686 418 aa16.61■□□□□ 0.25
SMARCA4-207ENST00000541122 KCNJ12Q14500 433 aa16.61■□□□□ 0.25
SMARCA4-207ENST00000541122 SSH3Q8TE77 659 aa16.61■□□□□ 0.25
SMARCA4-207ENST00000541122 DBNDD2Q9BQY9 259 aa16.61■□□□□ 0.25
SMARCA4-207ENST00000541122 BCAP29Q9UHQ4 241 aa16.61■□□□□ 0.25
SMARCA4-207ENST00000541122 ARID4AP29374 1257 aaPredicted RBP16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 TPD52P55327 224 aaPredicted RBP16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 RBBP5Q15291 538 aaKnown RBP16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 MUM1Q2TAK8 710 aa16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 HAUS3Q68CZ6 603 aa16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 CEP120Q8N960 986 aa16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 CACTINQ8WUQ7 758 aaKnown RBP16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 EYA1Q99502 592 aa16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 ASIC3Q9UHC3 531 aa16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 LETM2Q2VYF4 491 aa16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 RNF168Q8IYW5 571 aaPredicted RBP16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 TRIM31Q9BZY9 425 aa16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 TPCN1Q9ULQ1 816 aa16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 EDC4Q6P2E9 1401 aaKnown RBP16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 PLXNC1O60486 1568 aa16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 E7EWF7 191 aa16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 BEND3Q5T5X7 828 aa16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 GLT8D2Q9H1C3 349 aa16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 STAP2Q9UGK3 403 aa16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 FAM169AQ9Y6X4 670 aa16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 GPAA1O43292 621 aa16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 METTL22Q9BUU2 404 aaPredicted RBP16.6■□□□□ 0.25
SMARCA4-207ENST00000541122 H7C1D1 291 aa16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 MAP3K21Q5TCX8 1036 aa16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 LARSQ9P2J5 1176 aaKnown RBP16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 MAPK8IP1Q9UQF2 711 aa16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 TROVE2P10155 538 aaKnown RBP eCLIP16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 STX2P32856 288 aa16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 CLCN6P51797 869 aa16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 ANKRD20A3Q5VUR7 823 aa16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 KRT28Q7Z3Y7 464 aa16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 KRT25Q7Z3Z0 450 aa16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 TMEM87AQ8NBN3 555 aa16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 CCDC97Q96F63 343 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 PCDHA7Q9UN72 937 aa16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 ATP10BO94823 1461 aa16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 PARP1P09874 1014 aaKnown RBP16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 MORC3Q14149 939 aa16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 LIN9Q5TKA1 542 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms