RNA–Protein interactions for RNA: ENST00000541081.1

TM7SF3-209, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 4

Gene TM7SF3, Length 516 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-209ENST00000541081 SMCR8Q8TEV9 937 aaPredicted RBP11.2□□□□□ -0.62
TM7SF3-209ENST00000541081 EDC3Q96F86 508 aaKnown RBP11.2□□□□□ -0.62
TM7SF3-209ENST00000541081 GPATCH3Q96I76 525 aa11.2□□□□□ -0.62
TM7SF3-209ENST00000541081 PHF12Q96QT6 1004 aa11.2□□□□□ -0.62
TM7SF3-209ENST00000541081 HAUS7Q99871 368 aa11.2□□□□□ -0.62
TM7SF3-209ENST00000541081 CRNKL1Q9BZJ0 848 aaKnown RBP11.2□□□□□ -0.62
TM7SF3-209ENST00000541081 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.2□□□□□ -0.62
TM7SF3-209ENST00000541081 PNMA3Q9UL41 463 aa11.2□□□□□ -0.62
TM7SF3-209ENST00000541081 LOC285556D6RIA3 1793 aa11.2□□□□□ -0.62
TM7SF3-209ENST00000541081 GALR2O43603 387 aaPredicted RBP11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 GDF11O95390 407 aa11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 FMNL1O95466 1100 aaPredicted RBP11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 GNRH1P01148 92 aa11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 POLR3DP05423 398 aaPredicted RBP11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 HOXD10P28358 340 aa11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 PSMC4P43686 418 aa11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 HMGCS2P54868 508 aa11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 RRP1BQ14684 758 aaKnown RBP11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 SLC9C1Q4G0N8 1177 aa11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 NBPF11Q86T75 865 aa11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 METTL16Q86W50 562 aaKnown RBP11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 PROCA1Q8NCQ7 364 aaPredicted RBP11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 DCBLD2Q96PD2 775 aa11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 RIOK1Q9BRS2 568 aaKnown RBP11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 ARHGAP39Q9C0H5 1083 aa11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 DCTPP1Q9H773 170 aa11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 DNAJC18Q9H819 358 aa11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 SERPINB13Q9UIV8 391 aa11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 AGTPBP1Q9UPW5 1226 aa11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 SLC45A1Q9Y2W3 748 aa11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 MGAMO43451 1857 aa11.19□□□□□ -0.62
TM7SF3-209ENST00000541081 DDX60LQ5H9U9 1706 aaKnown RBP11.18□□□□□ -0.62
TM7SF3-209ENST00000541081 ADGRA2Q96PE1 1338 aa11.18□□□□□ -0.62
TM7SF3-209ENST00000541081 PRMT2P55345 433 aa11.18□□□□□ -0.62
TM7SF3-209ENST00000541081 PABPC4Q13310 644 aaKnown RBP eCLIP11.18□□□□□ -0.62
TM7SF3-209ENST00000541081 TREML2Q5T2D2 321 aa11.18□□□□□ -0.62
TM7SF3-209ENST00000541081 ZSCAN25Q6NSZ9 544 aa11.18□□□□□ -0.62
TM7SF3-209ENST00000541081 EHD4Q9H223 541 aa11.18□□□□□ -0.62
TM7SF3-209ENST00000541081 ECHDC1Q9NTX5 307 aa11.18□□□□□ -0.62
TM7SF3-209ENST00000541081 GINM1Q9NU53 330 aa11.18□□□□□ -0.62
TM7SF3-209ENST00000541081 MCM9Q9NXL9 1143 aa11.18□□□□□ -0.62
TM7SF3-209ENST00000541081 TMOD4Q9NZQ9 345 aa11.18□□□□□ -0.62
TM7SF3-209ENST00000541081 PTCH2Q9Y6C5 1203 aa11.18□□□□□ -0.62
TM7SF3-209ENST00000541081 HTTP42858 3142 aa11.18□□□□□ -0.62
TM7SF3-209ENST00000541081 TCRBV5S4A2TA0A5A2 114 aa11.17□□□□□ -0.62
TM7SF3-209ENST00000541081 BCRP11274 1271 aa11.17□□□□□ -0.62
TM7SF3-209ENST00000541081 OSBPP22059 807 aa11.17□□□□□ -0.62
TM7SF3-209ENST00000541081 ADD2P35612 726 aa11.17□□□□□ -0.62
TM7SF3-209ENST00000541081 FCGRTP55899 365 aa11.17□□□□□ -0.62
TM7SF3-209ENST00000541081 MTMR2Q13614 643 aa11.17□□□□□ -0.62
TM7SF3-209ENST00000541081 LCORLQ8N3X6 602 aa11.17□□□□□ -0.62
TM7SF3-209ENST00000541081 SDR42E1Q8WUS8 393 aa11.17□□□□□ -0.62
TM7SF3-209ENST00000541081 WDR18Q9BV38 432 aa11.17□□□□□ -0.62
TM7SF3-209ENST00000541081 ARMT1Q9H993 441 aa11.17□□□□□ -0.62
TM7SF3-209ENST00000541081 ZBTB47Q9UFB7 747 aaPredicted RBP11.17□□□□□ -0.62
TM7SF3-209ENST00000541081 ZBTB21Q9ULJ3 1066 aa11.17□□□□□ -0.62
TM7SF3-209ENST00000541081 PCDHB15Q9Y5E8 787 aa11.17□□□□□ -0.62
TM7SF3-209ENST00000541081 TNRC18O15417 2968 aaPredicted RBP11.17□□□□□ -0.62
TM7SF3-209ENST00000541081 MYH8P13535 1937 aa11.17□□□□□ -0.62
TM7SF3-209ENST00000541081 RBBP6Q7Z6E9 1792 aaKnown RBP11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 MYPNQ86TC9 1320 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 C19orf81C9J6K1 198 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 USP17L10C9JJH3 530 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 MBD4O95243 580 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 GH2P01242 217 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 PLCD1P51178 756 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 BACE1P56817 501 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 JAG1P78504 1218 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 SHROOM1Q2M3G4 852 aaPredicted RBP11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 CERKLQ49MI3 558 aaPredicted RBP11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 SH3D19Q5HYK7 790 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 TATDN1Q6P1N9 297 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 AMOTL1Q8IY63 956 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 ANKRD13CQ8N6S4 541 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 RAET1EQ8TD07 263 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 ARMC5Q96C12 935 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 DDRGK1Q96HY6 314 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 TRIM47Q96LD4 638 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 CRBNQ96SW2 442 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 FEZ1Q99689 392 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 TMEM106CQ9BVX2 250 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 CABP5Q9NP86 173 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 SRRDQ9UH36 339 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 CENPFP49454 3210 aa11.16□□□□□ -0.62
TM7SF3-209ENST00000541081 BAZ2AQ9UIF9 1905 aaKnown RBP11.15□□□□□ -0.62
TM7SF3-209ENST00000541081 MYCP01106 439 aaPredicted RBP11.15□□□□□ -0.62
TM7SF3-209ENST00000541081 CTGFP29279 349 aa11.15□□□□□ -0.62
TM7SF3-209ENST00000541081 IRX3P78415 501 aaPredicted RBP11.15□□□□□ -0.62
TM7SF3-209ENST00000541081 RAB3GAP1Q15042 981 aa11.15□□□□□ -0.62
TM7SF3-209ENST00000541081 UBE3CQ15386 1083 aa11.15□□□□□ -0.62
TM7SF3-209ENST00000541081 ABCB5Q2M3G0 1257 aa11.15□□□□□ -0.62
TM7SF3-209ENST00000541081 SLFNL1Q499Z3 407 aa11.15□□□□□ -0.62
TM7SF3-209ENST00000541081 TSHZ3Q63HK5 1081 aa11.15□□□□□ -0.62
TM7SF3-209ENST00000541081 SH3TC2Q8TF17 1288 aa11.15□□□□□ -0.62
TM7SF3-209ENST00000541081 ZNF333Q96JL9 665 aa11.15□□□□□ -0.62
TM7SF3-209ENST00000541081 ASCC2Q9H1I8 757 aaPredicted RBP11.15□□□□□ -0.62
TM7SF3-209ENST00000541081 DCP1AQ9NPI6 582 aaPredicted RBP11.15□□□□□ -0.62
TM7SF3-209ENST00000541081 ATP8A2Q9NTI2 1148 aa11.15□□□□□ -0.62
TM7SF3-209ENST00000541081 POTEFA5A3E0 1075 aa11.14□□□□□ -0.63
TM7SF3-209ENST00000541081 MPHOSPH10O00566 681 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms