RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 MINDY4BA8MYZ0 360 aa11.82□□□□□ -0.52
CDC42SE1-207ENST00000540998 CDKL5O76039 1030 aa11.82□□□□□ -0.52
CDC42SE1-207ENST00000540998 RASGRF1Q13972 1273 aa11.82□□□□□ -0.52
CDC42SE1-207ENST00000540998 MORC3Q14149 939 aa11.82□□□□□ -0.52
CDC42SE1-207ENST00000540998 ARFGAP3Q9NP61 516 aa11.82□□□□□ -0.52
CDC42SE1-207ENST00000540998 PRDM11Q9NQV5 511 aa11.82□□□□□ -0.52
CDC42SE1-207ENST00000540998 NUP188Q5SRE5 1749 aa11.82□□□□□ -0.52
CDC42SE1-207ENST00000540998 PTPREP23469 700 aa11.82□□□□□ -0.52
CDC42SE1-207ENST00000540998 TDO2P48775 406 aa11.82□□□□□ -0.52
CDC42SE1-207ENST00000540998 RTN1Q16799 776 aa11.82□□□□□ -0.52
CDC42SE1-207ENST00000540998 APTXQ7Z2E3 356 aaKnown RBP11.82□□□□□ -0.52
CDC42SE1-207ENST00000540998 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.82□□□□□ -0.52
CDC42SE1-207ENST00000540998 ANKZF1Q9H8Y5 726 aa11.82□□□□□ -0.52
CDC42SE1-207ENST00000540998 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.82□□□□□ -0.52
CDC42SE1-207ENST00000540998 MYH8P13535 1937 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 VEGFAP15692 232 aaPredicted RBP11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 ATF3P18847 181 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 MPHOSPH8Q99549 860 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 TRMT112Q9UI30 125 aaKnown RBP11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 MYH7P12883 1935 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 IRS4O14654 1257 aaPredicted RBP11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 STX10O60499 249 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 FMNL1O95466 1100 aaPredicted RBP11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 CHMP4BP1P59074 171 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 NR1I3Q14994 352 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 ZNF174Q15697 407 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 VPS16Q9H269 839 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 VPS18Q9P253 973 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 ADGRG1Q9Y653 693 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 LAMB4A4D0S4 1761 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 GSG1L2A8MUP6 293 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 CCP110O43303 1012 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 BCAMP50895 628 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 NCAPH2Q6IBW4 605 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 ADGRA1Q86SQ6 560 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 SLC35F6Q8N357 371 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 VGLL2Q8N8G2 317 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 ZBTB38Q8NAP3 1195 aaPredicted RBP11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 RGS22Q8NE09 1264 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 CALCOCO1Q9P1Z2 691 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 CTNND2Q9UQB3 1225 aa11.81□□□□□ -0.52
CDC42SE1-207ENST00000540998 PKD1L3Q7Z443 1732 aa11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 FAM237AA0A1B0GTK4 181 aa11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 AKR1B15C9JRZ8 316 aaPredicted RBP11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 CSF1RP07333 972 aa11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 SARSP49591 514 aaKnown RBP11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 GPR161Q8N6U8 529 aaKnown RBP11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 NOA1Q8NC60 698 aaKnown RBP11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 SYMPKQ92797 1274 aaKnown RBP11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 GOLGA1Q92805 767 aa11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 TRIM34Q9BYJ4 488 aa11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 SLC4A4Q9Y6R1 1079 aa11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 SRCAPQ6ZRS2 3230 aa11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 DDX60Q8IY21 1712 aaKnown RBP11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 ENC1O14682 589 aa11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 PLEKHA8P1O95397 391 aa11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 PCCAP05165 728 aaPredicted RBP11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 CTSWP56202 376 aa11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 SAFBQ15424 915 aaKnown RBP eCLIP11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 KIF4BQ2VIQ3 1234 aa11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 KIF6Q6ZMV9 814 aa11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 MFSD6Q6ZSS7 791 aa11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 NLRP10Q86W26 655 aa11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 ENOX1Q8TC92 643 aaKnown RBP11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 UBXN6Q9BZV1 441 aa11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 ABCB6Q9NP58 842 aa11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 ATG3Q9NT62 314 aa11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 ADAM21Q9UKJ8 722 aa11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 KCPQ6ZWJ8 1503 aa11.8□□□□□ -0.52
CDC42SE1-207ENST00000540998 ANKRD18BA2A2Z9 1011 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 ZMYND10O75800 440 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 PDE8BO95263 885 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 GYPCP04921 128 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 CCDC175P0C221 793 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 VSNL1P62760 191 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 WTAPQ15007 396 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 TAF3Q5VWG9 929 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 NUTM2AQ8IVF1 878 aaPredicted RBP11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 SLF1Q9BQI6 1058 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 TAB2Q9NYJ8 693 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 HDAC6Q9UBN7 1215 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 SYNRGQ9UMZ2 1314 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 TXLNAP40222 546 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 PLCD1P51178 756 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 ERVK-24P63145 666 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 AKNAD1Q5T1N1 836 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 PLCD3Q8N3E9 789 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 CRACR2BQ8N4Y2 399 aaPredicted RBP11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 SPATA5Q8NB90 893 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 TMEM87BQ96K49 555 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 SRRTQ9BXP5 876 aaKnown RBP11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 A0A1B0GTH6 734 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 IFNAR1P17181 557 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 MRPS25P82663 173 aaKnown RBP11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 ZSCAN26Q16670 478 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 SGMS1Q86VZ5 419 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 C10orf67Q8IYJ2 551 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 PIGBQ92521 554 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 PLIN2Q99541 437 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 ZBTB1Q9Y2K1 713 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms