RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 ZNRF3Q9ULT6 936 aa7.94□□□□□ -1.14
CLTCL1-206ENST00000540896 CCDC171Q6TFL3 1326 aa7.94□□□□□ -1.14
CLTCL1-206ENST00000540896 FAM205AQ6ZU69 1335 aa7.94□□□□□ -1.14
CLTCL1-206ENST00000540896 COL4A5P29400 1685 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 MAGEB6P1A0A0J9YX57 407 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 USP17L3A6NCW0 530 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 USP17L4A6NCW7 530 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 FZD9O00144 591 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 ST8SIA5O15466 376 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 GPAA1O43292 621 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 HOXA2O43364 376 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 IGSF3O75054 1194 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 PRDX5P30044 214 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 EIF6P56537 245 aaKnown RBP7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 PTH1RQ03431 593 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 STRIP1Q5VSL9 837 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 RNF20Q5VTR2 975 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 USP17L1Q7RTZ2 530 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 ZNF589Q86UQ0 364 aaPredicted RBP7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 MIGA1Q8NAN2 632 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 NSUN4Q96CB9 384 aaKnown RBP7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 TBC1D32Q96NH3 1257 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 LSG1Q9H089 658 aaKnown RBP7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 PUS7LQ9H0K6 701 aaKnown RBP7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 IL25Q9H293 177 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 ARMT1Q9H993 441 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 KCNQ5Q9NR82 932 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 MAST3O60307 1309 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 SALL1Q9NSC2 1324 aa7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 DICER1Q9UPY3 1922 aaKnown RBP7.93□□□□□ -1.14
CLTCL1-206ENST00000540896 ARAP2Q8WZ64 1704 aa7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 TCRBV5S4A2TA0A5A2 114 aa7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 YDJCA8MPS7 323 aa7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 EPB41L2O43491 1005 aaKnown RBP7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 RAD17O75943 681 aa7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 MBD4O95243 580 aa7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 BAG3O95817 575 aa7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 ZKSCAN1P17029 563 aaPredicted RBP7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 RBM5P52756 815 aaKnown RBP eCLIP7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 CXCL9Q07325 125 aa7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 TNIP1Q15025 636 aa7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 DIXDC1Q155Q3 683 aa7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 GRIK5Q16478 980 aa7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 TMED8Q6PL24 325 aaPredicted RBP7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 MAP4K1Q92918 833 aa7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 MXD3Q9BW11 206 aa7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 NACAP1Q9BZK3 213 aa7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 FAM217BQ9NTX9 383 aaPredicted RBP7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 CTNNA3Q9UI47 895 aa7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 TTF2Q9UNY4 1162 aaKnown RBP7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 SUGT1Q9Y2Z0 365 aa7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 SLC4A4Q9Y6R1 1079 aa7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 ZC3H4Q9UPT8 1303 aaKnown RBP7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 COL1A1P02452 1464 aaPredicted RBP7.92□□□□□ -1.14
CLTCL1-206ENST00000540896 POTECB2RU33 542 aa7.91□□□□□ -1.14
CLTCL1-206ENST00000540896 PATL2C9JE40 543 aaKnown RBP7.91□□□□□ -1.14
CLTCL1-206ENST00000540896 HSPD1P10809 573 aaKnown RBP7.91□□□□□ -1.14
CLTCL1-206ENST00000540896 GNAT2P19087 354 aa7.91□□□□□ -1.14
CLTCL1-206ENST00000540896 RBM25P49756 843 aaKnown RBP7.91□□□□□ -1.14
CLTCL1-206ENST00000540896 WNT7BP56706 349 aa7.91□□□□□ -1.14
CLTCL1-206ENST00000540896 DYNLL1P63167 89 aaKnown RBP7.91□□□□□ -1.14
CLTCL1-206ENST00000540896 VPS53Q5VIR6 699 aa7.91□□□□□ -1.14
CLTCL1-206ENST00000540896 KIAA0825Q8IV33 1275 aa7.91□□□□□ -1.14
CLTCL1-206ENST00000540896 LCORLQ8N3X6 602 aa7.91□□□□□ -1.14
CLTCL1-206ENST00000540896 DDRGK1Q96HY6 314 aa7.91□□□□□ -1.14
CLTCL1-206ENST00000540896 STRBPQ96SI9 672 aaKnown RBP7.91□□□□□ -1.14
CLTCL1-206ENST00000540896 DSCC1Q9BVC3 393 aa7.91□□□□□ -1.14
CLTCL1-206ENST00000540896 CRNKL1Q9BZJ0 848 aaKnown RBP7.91□□□□□ -1.14
CLTCL1-206ENST00000540896 AATFQ9NY61 560 aaKnown RBP eCLIP7.91□□□□□ -1.14
CLTCL1-206ENST00000540896 RBM8AQ9Y5S9 174 aaKnown RBP7.91□□□□□ -1.14
CLTCL1-206ENST00000540896 GJA3Q9Y6H8 435 aa7.91□□□□□ -1.14
CLTCL1-206ENST00000540896 ZNF541Q9H0D2 1346 aa7.91□□□□□ -1.14
CLTCL1-206ENST00000540896 TIAM2Q8IVF5 1701 aa7.91□□□□□ -1.14
CLTCL1-206ENST00000540896 MYO3BQ8WXR4 1341 aa7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 GLTPD2A6NH11 291 aa7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 PSMD14O00487 310 aa7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 DDNO94850 711 aaPredicted RBP7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 JUNDP17535 347 aa7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 YY1P25490 414 aa7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 HSPA4P34932 840 aa7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 TDO2P48775 406 aa7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 SCNN1DP51172 638 aa7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 IMMTQ16891 758 aaKnown RBP7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 DACT2Q5SW24 774 aa7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 CREB3L3Q68CJ9 461 aa7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 CIAPIN1Q6FI81 312 aa7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 ADGRA1Q86SQ6 560 aa7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 CERS3Q8IU89 383 aa7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 GPC2Q8N158 579 aa7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 OGFOD1Q8N543 542 aa7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 CERS5Q8N5B7 392 aa7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 ZNF526Q8TF50 670 aaPredicted RBP7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 TEKT1Q969V4 418 aa7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 NAPBQ9H115 298 aa7.9□□□□□ -1.14
CLTCL1-206ENST00000540896 MROH7-TTC4A0A0A0MT08 1334 aa7.89□□□□□ -1.15
CLTCL1-206ENST00000540896 ZNF213O14771 459 aa7.89□□□□□ -1.15
CLTCL1-206ENST00000540896 SLC27A2O14975 620 aa7.89□□□□□ -1.15
CLTCL1-206ENST00000540896 PRKAB2O43741 272 aa7.89□□□□□ -1.15
CLTCL1-206ENST00000540896 FGAP02671 866 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms