RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 SYNE3Q6ZMZ3 975 aa28.69■■■□□ 2.18
TTC3-225ENST00000540756 NIM1KQ8IY84 436 aa28.69■■■□□ 2.18
TTC3-225ENST00000540756 CMTR1Q8N1G2 835 aaKnown RBP28.69■■■□□ 2.18
TTC3-225ENST00000540756 GJB4Q9NTQ9 266 aa28.69■■■□□ 2.18
TTC3-225ENST00000540756 LMBRD1Q9NUN5 540 aa28.69■■■□□ 2.18
TTC3-225ENST00000540756 ORC3Q9UBD5 711 aaPredicted RBP28.69■■■□□ 2.18
TTC3-225ENST00000540756 GUCY1B3Q02153 619 aa28.68■■■□□ 2.18
TTC3-225ENST00000540756 CFAP100Q494V2 611 aa28.67■■■□□ 2.18
TTC3-225ENST00000540756 OTUD7BQ6GQQ9 843 aa28.67■■■□□ 2.18
TTC3-225ENST00000540756 RCSD1Q6JBY9 416 aa28.67■■■□□ 2.18
TTC3-225ENST00000540756 PRMT6Q96LA8 375 aaPredicted RBP28.67■■■□□ 2.18
TTC3-225ENST00000540756 OSBPL5Q9H0X9 879 aaPredicted RBP28.67■■■□□ 2.18
TTC3-225ENST00000540756 VPS33BQ9H267 617 aa28.67■■■□□ 2.18
TTC3-225ENST00000540756 GOLGA6L22H0YM25 854 aa28.67■■■□□ 2.18
TTC3-225ENST00000540756 TCP10Q12799 353 aa28.67■■■□□ 2.18
TTC3-225ENST00000540756 AIFM3Q96NN9 605 aa28.67■■■□□ 2.18
TTC3-225ENST00000540756 GMLQ99445 158 aa28.67■■■□□ 2.18
TTC3-225ENST00000540756 CNPY2Q9Y2B0 182 aa28.67■■■□□ 2.18
TTC3-225ENST00000540756 H3BQV1 296 aa28.66■■■□□ 2.18
TTC3-225ENST00000540756 RASSF7Q02833 373 aa28.66■■■□□ 2.18
TTC3-225ENST00000540756 IFFO2Q5TF58 517 aa28.66■■■□□ 2.18
TTC3-225ENST00000540756 ZNF444Q8N0Y2 327 aaPredicted RBP28.66■■■□□ 2.18
TTC3-225ENST00000540756 CHMP4CQ96CF2 233 aa28.66■■■□□ 2.18
TTC3-225ENST00000540756 TDRD3Q9H7E2 651 aaKnown RBP28.66■■■□□ 2.18
TTC3-225ENST00000540756 DNM1Q05193 864 aaKnown RBP28.65■■■□□ 2.18
TTC3-225ENST00000540756 CXCL9Q07325 125 aa28.65■■■□□ 2.18
TTC3-225ENST00000540756 RTN1Q16799 776 aa28.65■■■□□ 2.18
TTC3-225ENST00000540756 CCDC82Q8N4S0 544 aa28.65■■■□□ 2.18
TTC3-225ENST00000540756 FANCBQ8NB91 859 aa28.65■■■□□ 2.18
TTC3-225ENST00000540756 TAOK2Q9UL54 1235 aa28.65■■■□□ 2.18
TTC3-225ENST00000540756 NID2Q14112 1375 aa28.65■■■□□ 2.18
TTC3-225ENST00000540756 TSPY3P0CV98 308 aa28.65■■■□□ 2.18
TTC3-225ENST00000540756 TSPY8P0CW00 308 aa28.65■■■□□ 2.18
TTC3-225ENST00000540756 PRELPP51888 382 aa28.65■■■□□ 2.18
TTC3-225ENST00000540756 FAM198AQ9UFP1 575 aa28.65■■■□□ 2.18
TTC3-225ENST00000540756 GABPAQ06546 454 aa28.64■■■□□ 2.17
TTC3-225ENST00000540756 TROAPQ12815 778 aa28.64■■■□□ 2.17
TTC3-225ENST00000540756 CATIPQ7Z7H3 387 aa28.62■■■□□ 2.17
TTC3-225ENST00000540756 TTC6Q86TZ1 520 aa28.62■■■□□ 2.17
TTC3-225ENST00000540756 RESTQ13127 1097 aa28.62■■■□□ 2.17
TTC3-225ENST00000540756 DDTLA6NHG4 134 aaPredicted RBP28.61■■■□□ 2.17
TTC3-225ENST00000540756 PDIA4P13667 645 aaKnown RBP28.61■■■□□ 2.17
TTC3-225ENST00000540756 NCLP19338 710 aaKnown RBP28.61■■■□□ 2.17
TTC3-225ENST00000540756 SH3BP5LQ7L8J4 393 aa28.61■■■□□ 2.17
TTC3-225ENST00000540756 IDI2Q9BXS1 227 aa28.61■■■□□ 2.17
TTC3-225ENST00000540756 SLC26A6Q9BXS9 759 aa28.61■■■□□ 2.17
TTC3-225ENST00000540756 GZF1Q9H116 711 aaPredicted RBP28.61■■■□□ 2.17
TTC3-225ENST00000540756 SPON1Q9HCB6 807 aa28.61■■■□□ 2.17
TTC3-225ENST00000540756 KIF3AQ9Y496 699 aa28.61■■■□□ 2.17
TTC3-225ENST00000540756 MYO3BQ8WXR4 1341 aa28.61■■■□□ 2.17
TTC3-225ENST00000540756 CDKL5O76039 1030 aa28.6■■■□□ 2.17
TTC3-225ENST00000540756 GUCY1A2P33402 732 aa28.6■■■□□ 2.17
TTC3-225ENST00000540756 NBPF11Q86T75 865 aa28.6■■■□□ 2.17
TTC3-225ENST00000540756 JDP2Q8WYK2 163 aa28.6■■■□□ 2.17
TTC3-225ENST00000540756 SHTN1A0MZ66 631 aa28.6■■■□□ 2.17
TTC3-225ENST00000540756 IFNAR1P17181 557 aa28.6■■■□□ 2.17
TTC3-225ENST00000540756 CPLX2Q6PUV4 134 aaKnown RBP28.6■■■□□ 2.17
TTC3-225ENST00000540756 USP48Q86UV5 1035 aa28.6■■■□□ 2.17
TTC3-225ENST00000540756 C8orf76Q96K31 380 aa28.6■■■□□ 2.17
TTC3-225ENST00000540756 ZNF287Q9HBT7 754 aa28.6■■■□□ 2.17
TTC3-225ENST00000540756 SERPINB13Q9UIV8 391 aa28.6■■■□□ 2.17
TTC3-225ENST00000540756 ATP6V1DQ9Y5K8 247 aa28.6■■■□□ 2.17
TTC3-225ENST00000540756 BAZ2BQ9UIF8 2168 aaKnown RBP28.59■■■□□ 2.17
TTC3-225ENST00000540756 SIPA1L1O43166 1804 aa28.59■■■□□ 2.17
TTC3-225ENST00000540756 RCAN1P53805 252 aa28.59■■■□□ 2.17
TTC3-225ENST00000540756 MYH8P13535 1937 aa28.59■■■□□ 2.17
TTC3-225ENST00000540756 FIBPO43427 364 aa28.59■■■□□ 2.17
TTC3-225ENST00000540756 PLEKHA8P1O95397 391 aa28.59■■■□□ 2.17
TTC3-225ENST00000540756 TCP11L1Q9NUJ3 509 aa28.59■■■□□ 2.17
TTC3-225ENST00000540756 SPDYE2BA6NHP3 402 aa28.58■■■□□ 2.17
TTC3-225ENST00000540756 FAM196BA6NMK8 535 aa28.58■■■□□ 2.17
TTC3-225ENST00000540756 SPDYE6P0CI01 402 aa28.58■■■□□ 2.17
TTC3-225ENST00000540756 DGKHQ86XP1 1220 aa28.58■■■□□ 2.17
TTC3-225ENST00000540756 ALG1Q9BT22 464 aa28.58■■■□□ 2.17
TTC3-225ENST00000540756 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.58■■■□□ 2.17
TTC3-225ENST00000540756 STX8Q9UNK0 236 aa28.58■■■□□ 2.17
TTC3-225ENST00000540756 ARFGEF1Q9Y6D6 1849 aa28.58■■■□□ 2.17
TTC3-225ENST00000540756 CLRN2A0PK11 232 aa28.57■■■□□ 2.16
TTC3-225ENST00000540756 GADD45BO75293 160 aaPredicted RBP28.57■■■□□ 2.16
TTC3-225ENST00000540756 FMNL1O95466 1100 aaPredicted RBP28.57■■■□□ 2.16
TTC3-225ENST00000540756 SSRP1Q08945 709 aaKnown RBP28.57■■■□□ 2.16
TTC3-225ENST00000540756 CRACR2BQ8N4Y2 399 aaPredicted RBP28.57■■■□□ 2.16
TTC3-225ENST00000540756 NEDD1Q8NHV4 660 aa28.57■■■□□ 2.16
TTC3-225ENST00000540756 CIAPIN1Q6FI81 312 aa28.57■■■□□ 2.16
TTC3-225ENST00000540756 OGFOD1Q8N543 542 aa28.57■■■□□ 2.16
TTC3-225ENST00000540756 FBXO18Q8NFZ0 1043 aa28.57■■■□□ 2.16
TTC3-225ENST00000540756 GPT2Q8TD30 523 aa28.57■■■□□ 2.16
TTC3-225ENST00000540756 DNAJC18Q9H819 358 aa28.57■■■□□ 2.16
TTC3-225ENST00000540756 DDX49Q9Y6V7 483 aaKnown RBP28.57■■■□□ 2.16
TTC3-225ENST00000540756 DDAH1O94760 285 aa28.56■■■□□ 2.16
TTC3-225ENST00000540756 AKR1B1P15121 316 aa28.56■■■□□ 2.16
TTC3-225ENST00000540756 SHMT1P34896 483 aa28.56■■■□□ 2.16
TTC3-225ENST00000540756 ILDR2Q71H61 639 aa28.56■■■□□ 2.16
TTC3-225ENST00000540756 ANKS1AQ92625 1134 aa28.56■■■□□ 2.16
TTC3-225ENST00000540756 CEP95Q96GE4 821 aa28.56■■■□□ 2.16
TTC3-225ENST00000540756 FHDC1Q9C0D6 1143 aaPredicted RBP28.56■■■□□ 2.16
TTC3-225ENST00000540756 KAT14Q9H8E8 782 aa28.56■■■□□ 2.16
TTC3-225ENST00000540756 TFIP11Q9UBB9 837 aaKnown RBP28.56■■■□□ 2.16
TTC3-225ENST00000540756 CCDC196A0A1B0GTZ2 297 aa28.55■■■□□ 2.16
TTC3-225ENST00000540756 FUT2Q10981 343 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms