RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 MOGSQ13724 837 aa16.07■□□□□ 0.16
CCDC130-202ENST00000540216 ZMYM1Q5SVZ6 1142 aa16.07■□□□□ 0.16
CCDC130-202ENST00000540216 ZNF296Q8WUU4 475 aaPredicted RBP16.07■□□□□ 0.16
CCDC130-202ENST00000540216 WDR18Q9BV38 432 aa16.07■□□□□ 0.16
CCDC130-202ENST00000540216 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.07■□□□□ 0.16
CCDC130-202ENST00000540216 ARPP21Q9UBL0 812 aaPredicted RBP16.07■□□□□ 0.16
CCDC130-202ENST00000540216 SWAP70Q9UH65 585 aa16.07■□□□□ 0.16
CCDC130-202ENST00000540216 ZBTB21Q9ULJ3 1066 aa16.07■□□□□ 0.16
CCDC130-202ENST00000540216 BAZ2AQ9UIF9 1905 aaKnown RBP16.06■□□□□ 0.16
CCDC130-202ENST00000540216 TRIM75PA6NK02 468 aa16.06■□□□□ 0.16
CCDC130-202ENST00000540216 SHMT1P34896 483 aa16.06■□□□□ 0.16
CCDC130-202ENST00000540216 CERKLQ49MI3 558 aaPredicted RBP16.06■□□□□ 0.16
CCDC130-202ENST00000540216 C12orf60Q5U649 245 aa16.06■□□□□ 0.16
CCDC130-202ENST00000540216 PROCA1Q8NCQ7 364 aaPredicted RBP16.06■□□□□ 0.16
CCDC130-202ENST00000540216 R3HDMLQ9H3Y0 253 aa16.06■□□□□ 0.16
CCDC130-202ENST00000540216 SLC45A1Q9Y2W3 748 aa16.06■□□□□ 0.16
CCDC130-202ENST00000540216 GSG1L2A8MUP6 293 aa16.05■□□□□ 0.16
CCDC130-202ENST00000540216 TRIM6-TRIM34B2RNG4 842 aa16.05■□□□□ 0.16
CCDC130-202ENST00000540216 USP17L12C9JPN9 530 aa16.05■□□□□ 0.16
CCDC130-202ENST00000540216 USP17L21D6R901 530 aa16.05■□□□□ 0.16
CCDC130-202ENST00000540216 M0R2C6 588 aa16.05■□□□□ 0.16
CCDC130-202ENST00000540216 PDHXO00330 501 aa16.05■□□□□ 0.16
CCDC130-202ENST00000540216 GDF11O95390 407 aa16.05■□□□□ 0.16
CCDC130-202ENST00000540216 SPP2Q13103 211 aa16.05■□□□□ 0.16
CCDC130-202ENST00000540216 ABCB5Q2M3G0 1257 aa16.05■□□□□ 0.16
CCDC130-202ENST00000540216 SBK1Q52WX2 424 aa16.05■□□□□ 0.16
CCDC130-202ENST00000540216 CTU1Q7Z7A3 348 aaKnown RBP16.05■□□□□ 0.16
CCDC130-202ENST00000540216 CCDC84Q86UT8 332 aaPredicted RBP16.05■□□□□ 0.16
CCDC130-202ENST00000540216 PARK7Q99497 189 aaKnown RBP16.05■□□□□ 0.16
CCDC130-202ENST00000540216 CABP5Q9NP86 173 aa16.05■□□□□ 0.16
CCDC130-202ENST00000540216 LOC285556D6RIA3 1793 aa16.05■□□□□ 0.16
CCDC130-202ENST00000540216 TLR2O60603 784 aa16.04■□□□□ 0.16
CCDC130-202ENST00000540216 GH2P01242 217 aa16.04■□□□□ 0.16
CCDC130-202ENST00000540216 CYP2D6P10635 497 aa16.04■□□□□ 0.16
CCDC130-202ENST00000540216 SH3D19Q5HYK7 790 aa16.04■□□□□ 0.16
CCDC130-202ENST00000540216 GPAT2Q6NUI2 795 aa16.04■□□□□ 0.16
CCDC130-202ENST00000540216 CTR9Q6PD62 1173 aa16.04■□□□□ 0.16
CCDC130-202ENST00000540216 GADL1Q6ZQY3 521 aa16.04■□□□□ 0.16
CCDC130-202ENST00000540216 NACAP1Q9BZK3 213 aa16.04■□□□□ 0.16
CCDC130-202ENST00000540216 HELLSQ9NRZ9 838 aa16.04■□□□□ 0.16
CCDC130-202ENST00000540216 AGTPBP1Q9UPW5 1226 aa16.04■□□□□ 0.16
CCDC130-202ENST00000540216 ROBO3Q96MS0 1386 aa16.03■□□□□ 0.16
CCDC130-202ENST00000540216 C19orf81C9J6K1 198 aa16.03■□□□□ 0.16
CCDC130-202ENST00000540216 BACE1P56817 501 aa16.03■□□□□ 0.16
CCDC130-202ENST00000540216 JAG1P78504 1218 aa16.03■□□□□ 0.16
CCDC130-202ENST00000540216 C16orf86Q6ZW13 317 aa16.03■□□□□ 0.16
CCDC130-202ENST00000540216 ERO1AQ96HE7 468 aa16.03■□□□□ 0.16
CCDC130-202ENST00000540216 CCDC17Q96LX7 622 aa16.03■□□□□ 0.16
CCDC130-202ENST00000540216 MYH8P13535 1937 aa16.02■□□□□ 0.16
CCDC130-202ENST00000540216 PATL2C9JE40 543 aaKnown RBP16.02■□□□□ 0.16
CCDC130-202ENST00000540216 USP17L10C9JJH3 530 aa16.02■□□□□ 0.16
CCDC130-202ENST00000540216 APPP05067 770 aa16.02■□□□□ 0.16
CCDC130-202ENST00000540216 TDO2P48775 406 aa16.02■□□□□ 0.16
CCDC130-202ENST00000540216 HMGCS2P54868 508 aa16.02■□□□□ 0.16
CCDC130-202ENST00000540216 SP3Q02447 781 aa16.02■□□□□ 0.16
CCDC130-202ENST00000540216 PABPC4Q13310 644 aaKnown RBP eCLIP16.02■□□□□ 0.16
CCDC130-202ENST00000540216 DGKZQ13574 1117 aa16.02■□□□□ 0.16
CCDC130-202ENST00000540216 MTMR2Q13614 643 aa16.02■□□□□ 0.16
CCDC130-202ENST00000540216 PKN2Q16513 984 aaKnown RBP16.02■□□□□ 0.16
CCDC130-202ENST00000540216 IFFO2Q5TF58 517 aa16.02■□□□□ 0.16
CCDC130-202ENST00000540216 RILPL2Q969X0 211 aa16.02■□□□□ 0.16
CCDC130-202ENST00000540216 DYNLL2Q96FJ2 89 aa16.02■□□□□ 0.16
CCDC130-202ENST00000540216 SEC62Q99442 399 aaKnown RBP16.02■□□□□ 0.16
CCDC130-202ENST00000540216 TMOD4Q9NZQ9 345 aa16.02■□□□□ 0.16
CCDC130-202ENST00000540216 PNMA3Q9UL41 463 aa16.02■□□□□ 0.16
CCDC130-202ENST00000540216 ADGRA2Q96PE1 1338 aa16.01■□□□□ 0.15
CCDC130-202ENST00000540216 CYP2D7A0A087X1C5 515 aa16.01■□□□□ 0.15
CCDC130-202ENST00000540216 PDE4AP27815 886 aa16.01■□□□□ 0.15
CCDC130-202ENST00000540216 CDK8P49336 464 aa16.01■□□□□ 0.15
CCDC130-202ENST00000540216 EVX2Q03828 476 aa16.01■□□□□ 0.15
CCDC130-202ENST00000540216 RAB3GAP1Q15042 981 aa16.01■□□□□ 0.15
CCDC130-202ENST00000540216 ARHGEF6Q15052 776 aa16.01■□□□□ 0.15
CCDC130-202ENST00000540216 SHROOM1Q2M3G4 852 aaPredicted RBP16.01■□□□□ 0.15
CCDC130-202ENST00000540216 TMEM179Q6ZVK1 233 aa16.01■□□□□ 0.15
CCDC130-202ENST00000540216 SLC44A5Q8NCS7 719 aa16.01■□□□□ 0.15
CCDC130-202ENST00000540216 ZNF287Q9HBT7 754 aa16.01■□□□□ 0.15
CCDC130-202ENST00000540216 EPB41L4AQ9HCS5 686 aaPredicted RBP16.01■□□□□ 0.15
CCDC130-202ENST00000540216 HIP1O00291 1037 aa16■□□□□ 0.15
CCDC130-202ENST00000540216 USP14P54578 494 aa16■□□□□ 0.15
CCDC130-202ENST00000540216 MCMDC2Q4G0Z9 681 aa16■□□□□ 0.15
CCDC130-202ENST00000540216 USP17L2Q6R6M4 530 aa16■□□□□ 0.15
CCDC130-202ENST00000540216 IFNL3Q8IZI9 196 aa16■□□□□ 0.15
CCDC130-202ENST00000540216 FEZ1Q99689 392 aa16■□□□□ 0.15
CCDC130-202ENST00000540216 MCOLN1Q9GZU1 580 aa16■□□□□ 0.15
CCDC130-202ENST00000540216 KIAA1683Q9H0B3 1180 aa16■□□□□ 0.15
CCDC130-202ENST00000540216 NAPBQ9H115 298 aa16■□□□□ 0.15
CCDC130-202ENST00000540216 A0A0D9SFI3 127 aa15.99■□□□□ 0.15
CCDC130-202ENST00000540216 MPHOSPH10O00566 681 aaKnown RBP15.99■□□□□ 0.15
CCDC130-202ENST00000540216 SDSP20132 328 aa15.99■□□□□ 0.15
CCDC130-202ENST00000540216 GUCY1A2P33402 732 aa15.99■□□□□ 0.15
CCDC130-202ENST00000540216 MFAP1P55081 439 aaKnown RBP15.99■□□□□ 0.15
CCDC130-202ENST00000540216 KIF22Q14807 665 aa15.99■□□□□ 0.15
CCDC130-202ENST00000540216 TREML2Q5T2D2 321 aa15.99■□□□□ 0.15
CCDC130-202ENST00000540216 TTC22Q5TAA0 569 aa15.99■□□□□ 0.15
CCDC130-202ENST00000540216 C17orf99Q6UX52 265 aa15.99■□□□□ 0.15
CCDC130-202ENST00000540216 CENPQQ7L2Z9 268 aaPredicted RBP15.99■□□□□ 0.15
CCDC130-202ENST00000540216 C12orf42Q96LP6 360 aa15.99■□□□□ 0.15
CCDC130-202ENST00000540216 FAM227BQ96M60 508 aa15.99■□□□□ 0.15
CCDC130-202ENST00000540216 MINDY4BA8MYZ0 360 aa15.98■□□□□ 0.15
CCDC130-202ENST00000540216 SLC3A2P08195 630 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms