RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ADKP55263 362 aaKnown RBP16.15■□□□□ 0.18
UBE3B-210ENST00000539599 KMT5BQ4FZB7 885 aa16.15■□□□□ 0.18
UBE3B-210ENST00000539599 FAM47AQ5JRC9 791 aa16.15■□□□□ 0.18
UBE3B-210ENST00000539599 KLHL10Q6JEL2 608 aa16.15■□□□□ 0.18
UBE3B-210ENST00000539599 MAGEB6P1A0A0J9YX57 407 aa16.15■□□□□ 0.18
UBE3B-210ENST00000539599 CYP2D6P10635 497 aa16.15■□□□□ 0.18
UBE3B-210ENST00000539599 ZSCAN20P17040 1043 aaPredicted RBP16.15■□□□□ 0.18
UBE3B-210ENST00000539599 HOMER1Q86YM7 354 aa16.15■□□□□ 0.18
UBE3B-210ENST00000539599 DHX58Q96C10 678 aa16.15■□□□□ 0.18
UBE3B-210ENST00000539599 CNNM2Q9H8M5 875 aa16.15■□□□□ 0.18
UBE3B-210ENST00000539599 V9GY48 417 aaPredicted RBP16.15■□□□□ 0.18
UBE3B-210ENST00000539599 TPM4P67936 248 aa16.14■□□□□ 0.17
UBE3B-210ENST00000539599 POSTNQ15063 836 aa16.14■□□□□ 0.17
UBE3B-210ENST00000539599 SAFBQ15424 915 aaKnown RBP eCLIP16.14■□□□□ 0.17
UBE3B-210ENST00000539599 OLFM4Q6UX06 510 aa16.14■□□□□ 0.17
UBE3B-210ENST00000539599 TIGD1Q96MW7 591 aa16.14■□□□□ 0.17
UBE3B-210ENST00000539599 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.14■□□□□ 0.17
UBE3B-210ENST00000539599 MTMR7Q9Y216 660 aa16.14■□□□□ 0.17
UBE3B-210ENST00000539599 CICQ96RK0 1608 aaPredicted RBP16.14■□□□□ 0.17
UBE3B-210ENST00000539599 PKN1Q16512 942 aa16.14■□□□□ 0.17
UBE3B-210ENST00000539599 ERCC6LQ2NKX8 1250 aa16.14■□□□□ 0.17
UBE3B-210ENST00000539599 KIF18AQ8NI77 898 aa16.14■□□□□ 0.17
UBE3B-210ENST00000539599 NFE2L3Q9Y4A8 694 aa16.14■□□□□ 0.17
UBE3B-210ENST00000539599 IKBKBO14920 756 aa16.13■□□□□ 0.17
UBE3B-210ENST00000539599 SART3Q15020 963 aaKnown RBP16.13■□□□□ 0.17
UBE3B-210ENST00000539599 SEC23AQ15436 765 aa16.13■□□□□ 0.17
UBE3B-210ENST00000539599 FBXO38Q6PIJ6 1188 aa16.13■□□□□ 0.17
UBE3B-210ENST00000539599 ZBTB9Q96C00 473 aa16.13■□□□□ 0.17
UBE3B-210ENST00000539599 RIOK1Q9BRS2 568 aaKnown RBP16.13■□□□□ 0.17
UBE3B-210ENST00000539599 EPC1Q9H2F5 836 aa16.13■□□□□ 0.17
UBE3B-210ENST00000539599 IMPACTQ9P2X3 320 aa16.13■□□□□ 0.17
UBE3B-210ENST00000539599 DNAI1Q9UI46 699 aa16.13■□□□□ 0.17
UBE3B-210ENST00000539599 DOCK2Q92608 1830 aa16.13■□□□□ 0.17
UBE3B-210ENST00000539599 PTPREP23469 700 aa16.13■□□□□ 0.17
UBE3B-210ENST00000539599 ZNF174Q15697 407 aa16.13■□□□□ 0.17
UBE3B-210ENST00000539599 FAM182BQ5T319 152 aa16.13■□□□□ 0.17
UBE3B-210ENST00000539599 CCDC150Q8NCX0 1101 aa16.13■□□□□ 0.17
UBE3B-210ENST00000539599 AATFQ9NY61 560 aaKnown RBP eCLIP16.13■□□□□ 0.17
UBE3B-210ENST00000539599 PNPLA7Q6ZV29 1317 aa16.12■□□□□ 0.17
UBE3B-210ENST00000539599 STK36Q9NRP7 1315 aa16.12■□□□□ 0.17
UBE3B-210ENST00000539599 A0A0U1RQJ8 604 aa16.12■□□□□ 0.17
UBE3B-210ENST00000539599 DEXIO95424 95 aa16.12■□□□□ 0.17
UBE3B-210ENST00000539599 ATRIPQ8WXE1 791 aa16.12■□□□□ 0.17
UBE3B-210ENST00000539599 DESI2Q9BSY9 194 aa16.12■□□□□ 0.17
UBE3B-210ENST00000539599 ST7Q9NRC1 585 aa16.12■□□□□ 0.17
UBE3B-210ENST00000539599 PRDM4Q9UKN5 801 aa16.12■□□□□ 0.17
UBE3B-210ENST00000539599 USP17L12C9JPN9 530 aa16.12■□□□□ 0.17
UBE3B-210ENST00000539599 USP17L21D6R901 530 aa16.12■□□□□ 0.17
UBE3B-210ENST00000539599 TOP1P11387 765 aaKnown RBP16.12■□□□□ 0.17
UBE3B-210ENST00000539599 VSTM4Q8IW00 320 aa16.12■□□□□ 0.17
UBE3B-210ENST00000539599 PKNOX2Q96KN3 472 aa16.12■□□□□ 0.17
UBE3B-210ENST00000539599 SRP68Q9UHB9 627 aaKnown RBP16.12■□□□□ 0.17
UBE3B-210ENST00000539599 FAM237AA0A1B0GTK4 181 aa16.11■□□□□ 0.17
UBE3B-210ENST00000539599 BCL9LQ86UU0 1499 aa16.11■□□□□ 0.17
UBE3B-210ENST00000539599 ACTN4O43707 911 aaKnown RBP16.11■□□□□ 0.17
UBE3B-210ENST00000539599 CD44P16070 742 aaKnown RBP16.11■□□□□ 0.17
UBE3B-210ENST00000539599 CDK11BP21127 795 aaKnown RBP16.11■□□□□ 0.17
UBE3B-210ENST00000539599 PRDX5P30044 214 aa16.11■□□□□ 0.17
UBE3B-210ENST00000539599 CDC25AP30304 524 aa16.11■□□□□ 0.17
UBE3B-210ENST00000539599 MTF1Q14872 753 aa16.11■□□□□ 0.17
UBE3B-210ENST00000539599 TXNRD3Q86VQ6 643 aa16.11■□□□□ 0.17
UBE3B-210ENST00000539599 LINC00116Q8NCU8 138 aa16.11■□□□□ 0.17
UBE3B-210ENST00000539599 FAM84BQ96KN1 310 aaPredicted RBP16.11■□□□□ 0.17
UBE3B-210ENST00000539599 ARAP2Q8WZ64 1704 aa16.11■□□□□ 0.17
UBE3B-210ENST00000539599 IFIT1BQ5T764 474 aaKnown RBP16.1■□□□□ 0.17
UBE3B-210ENST00000539599 TOGARAM2Q6ZUX3 1019 aa16.1■□□□□ 0.17
UBE3B-210ENST00000539599 ZSCAN10Q96SZ4 725 aaPredicted RBP16.1■□□□□ 0.17
UBE3B-210ENST00000539599 MINPP1Q9UNW1 487 aa16.1■□□□□ 0.17
UBE3B-210ENST00000539599 TEX33O43247 280 aa16.1■□□□□ 0.17
UBE3B-210ENST00000539599 GTF2E1P29083 439 aaPredicted RBP16.1■□□□□ 0.17
UBE3B-210ENST00000539599 ANKRD18AQ8IVF6 992 aa16.1■□□□□ 0.17
UBE3B-210ENST00000539599 CPLX3Q8WVH0 158 aa16.1■□□□□ 0.17
UBE3B-210ENST00000539599 SMARCE1Q969G3 411 aa16.1■□□□□ 0.17
UBE3B-210ENST00000539599 BLZF1Q9H2G9 400 aa16.1■□□□□ 0.17
UBE3B-210ENST00000539599 FOXP1Q9H334 677 aaPredicted RBP16.1■□□□□ 0.17
UBE3B-210ENST00000539599 COL16A1Q07092 1604 aaPredicted RBP16.1■□□□□ 0.17
UBE3B-210ENST00000539599 BCORQ6W2J9 1755 aa16.1■□□□□ 0.17
UBE3B-210ENST00000539599 RILPL1Q5EBL4 403 aa16.09■□□□□ 0.17
UBE3B-210ENST00000539599 TBC1D9BQ66K14 1250 aa16.09■□□□□ 0.17
UBE3B-210ENST00000539599 AMIGO3Q86WK7 504 aa16.09■□□□□ 0.17
UBE3B-210ENST00000539599 TMEM139Q8IV31 216 aa16.09■□□□□ 0.17
UBE3B-210ENST00000539599 SMAP1Q8IYB5 467 aaPredicted RBP16.09■□□□□ 0.17
UBE3B-210ENST00000539599 ESR2Q92731 530 aa16.09■□□□□ 0.17
UBE3B-210ENST00000539599 SYMPKQ92797 1274 aaKnown RBP16.09■□□□□ 0.17
UBE3B-210ENST00000539599 PHLPP1O60346 1717 aa16.09■□□□□ 0.17
UBE3B-210ENST00000539599 SLU7O95391 586 aaKnown RBP16.09■□□□□ 0.17
UBE3B-210ENST00000539599 GNAT2P19087 354 aa16.09■□□□□ 0.17
UBE3B-210ENST00000539599 FUT2Q10981 343 aa16.09■□□□□ 0.17
UBE3B-210ENST00000539599 CTR9Q6PD62 1173 aa16.09■□□□□ 0.17
UBE3B-210ENST00000539599 RASGRP2Q7LDG7 609 aa16.09■□□□□ 0.17
UBE3B-210ENST00000539599 WASF1Q92558 559 aa16.09■□□□□ 0.17
UBE3B-210ENST00000539599 GPR101Q96P66 508 aaPredicted RBP16.09■□□□□ 0.17
UBE3B-210ENST00000539599 IRX2Q9BZI1 471 aaPredicted RBP16.09■□□□□ 0.17
UBE3B-210ENST00000539599 TIAM2Q8IVF5 1701 aa16.09■□□□□ 0.17
UBE3B-210ENST00000539599 MYH13Q9UKX3 1938 aa16.09■□□□□ 0.17
UBE3B-210ENST00000539599 VWA3AA6NCI4 1184 aa16.09■□□□□ 0.17
UBE3B-210ENST00000539599 AKAP17AQ02040 695 aaKnown RBP16.09■□□□□ 0.17
UBE3B-210ENST00000539599 PARP10Q53GL7 1025 aa16.09■□□□□ 0.17
UBE3B-210ENST00000539599 SPATA31A1Q5TZJ5 1347 aa16.08■□□□□ 0.17
UBE3B-210ENST00000539599 DPYDQ12882 1025 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms