RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 ZBTB21Q9ULJ3 1066 aa23.11■■□□□ 1.29
TNFRSF1A-212ENST00000539372 MYH1P12882 1939 aa23.1■■□□□ 1.29
TNFRSF1A-212ENST00000539372 TCRBV5S4A2TA0A5A2 114 aa23.1■■□□□ 1.29
TNFRSF1A-212ENST00000539372 EN2P19622 333 aaPredicted RBP23.1■■□□□ 1.29
TNFRSF1A-212ENST00000539372 PRKCZQ05513 592 aa23.1■■□□□ 1.29
TNFRSF1A-212ENST00000539372 SH3D19Q5HYK7 790 aa23.1■■□□□ 1.29
TNFRSF1A-212ENST00000539372 RAET1EQ8TD07 263 aa23.1■■□□□ 1.29
TNFRSF1A-212ENST00000539372 HAUS7Q99871 368 aa23.1■■□□□ 1.29
TNFRSF1A-212ENST00000539372 SERPINB13Q9UIV8 391 aa23.1■■□□□ 1.29
TNFRSF1A-212ENST00000539372 LOC285556D6RIA3 1793 aa23.09■■□□□ 1.29
TNFRSF1A-212ENST00000539372 GH2P01242 217 aa23.09■■□□□ 1.29
TNFRSF1A-212ENST00000539372 BACE1P56817 501 aa23.09■■□□□ 1.29
TNFRSF1A-212ENST00000539372 TTC6Q86TZ1 520 aa23.09■■□□□ 1.29
TNFRSF1A-212ENST00000539372 LCORLQ8N3X6 602 aa23.09■■□□□ 1.29
TNFRSF1A-212ENST00000539372 CRNKL1Q9BZJ0 848 aaKnown RBP23.09■■□□□ 1.29
TNFRSF1A-212ENST00000539372 POLR3DP05423 398 aaPredicted RBP23.08■■□□□ 1.29
TNFRSF1A-212ENST00000539372 PLCD1P51178 756 aa23.08■■□□□ 1.29
TNFRSF1A-212ENST00000539372 PABPC4Q13310 644 aaKnown RBP eCLIP23.08■■□□□ 1.29
TNFRSF1A-212ENST00000539372 EHD4Q9H223 541 aa23.08■■□□□ 1.29
TNFRSF1A-212ENST00000539372 GINM1Q9NU53 330 aa23.08■■□□□ 1.29
TNFRSF1A-212ENST00000539372 TMOD4Q9NZQ9 345 aa23.08■■□□□ 1.29
TNFRSF1A-212ENST00000539372 GABRQQ9UN88 632 aa23.08■■□□□ 1.29
TNFRSF1A-212ENST00000539372 EVX2Q03828 476 aa23.07■■□□□ 1.28
TNFRSF1A-212ENST00000539372 TATDN1Q6P1N9 297 aa23.07■■□□□ 1.28
TNFRSF1A-212ENST00000539372 SDR42E1Q8WUS8 393 aa23.07■■□□□ 1.28
TNFRSF1A-212ENST00000539372 ASCC2Q9H1I8 757 aaPredicted RBP23.07■■□□□ 1.28
TNFRSF1A-212ENST00000539372 ARMT1Q9H993 441 aa23.07■■□□□ 1.28
TNFRSF1A-212ENST00000539372 MCM9Q9NXL9 1143 aa23.07■■□□□ 1.28
TNFRSF1A-212ENST00000539372 BRCA2P51587 3418 aa23.07■■□□□ 1.28
TNFRSF1A-212ENST00000539372 USP17L10C9JJH3 530 aa23.06■■□□□ 1.28
TNFRSF1A-212ENST00000539372 CHGBP05060 677 aa23.06■■□□□ 1.28
TNFRSF1A-212ENST00000539372 GRK4P32298 578 aa23.06■■□□□ 1.28
TNFRSF1A-212ENST00000539372 ADD2P35612 726 aa23.06■■□□□ 1.28
TNFRSF1A-212ENST00000539372 YTHDC1Q96MU7 727 aaKnown RBP23.06■■□□□ 1.28
TNFRSF1A-212ENST00000539372 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.06■■□□□ 1.28
TNFRSF1A-212ENST00000539372 DCTPP1Q9H773 170 aa23.06■■□□□ 1.28
TNFRSF1A-212ENST00000539372 KIAA0100Q14667 2235 aaKnown RBP23.05■■□□□ 1.28
TNFRSF1A-212ENST00000539372 MGAMO43451 1857 aa23.05■■□□□ 1.28
TNFRSF1A-212ENST00000539372 RBBP6Q7Z6E9 1792 aaKnown RBP23.05■■□□□ 1.28
TNFRSF1A-212ENST00000539372 C19orf81C9J6K1 198 aa23.05■■□□□ 1.28
TNFRSF1A-212ENST00000539372 TNPO2O14787 897 aaKnown RBP23.05■■□□□ 1.28
TNFRSF1A-212ENST00000539372 MBD4O95243 580 aa23.05■■□□□ 1.28
TNFRSF1A-212ENST00000539372 CERKLQ49MI3 558 aaPredicted RBP23.05■■□□□ 1.28
TNFRSF1A-212ENST00000539372 DDX60LQ5H9U9 1706 aaKnown RBP23.05■■□□□ 1.28
TNFRSF1A-212ENST00000539372 NAV1Q8NEY1 1877 aa23.05■■□□□ 1.28
TNFRSF1A-212ENST00000539372 PRKAB2O43741 272 aa23.04■■□□□ 1.28
TNFRSF1A-212ENST00000539372 SHMT1P34896 483 aa23.04■■□□□ 1.28
TNFRSF1A-212ENST00000539372 GCLCP48506 637 aaPredicted RBP23.04■■□□□ 1.28
TNFRSF1A-212ENST00000539372 RRP1P56182 461 aaKnown RBP23.04■■□□□ 1.28
TNFRSF1A-212ENST00000539372 IRX3P78415 501 aaPredicted RBP23.04■■□□□ 1.28
TNFRSF1A-212ENST00000539372 RAB3GAP1Q15042 981 aa23.04■■□□□ 1.28
TNFRSF1A-212ENST00000539372 MTFR1Q15390 333 aa23.04■■□□□ 1.28
TNFRSF1A-212ENST00000539372 FAM110CQ1W6H9 321 aa23.04■■□□□ 1.28
TNFRSF1A-212ENST00000539372 ABCB5Q2M3G0 1257 aa23.04■■□□□ 1.28
TNFRSF1A-212ENST00000539372 DCP1AQ9NPI6 582 aaPredicted RBP23.04■■□□□ 1.28
TNFRSF1A-212ENST00000539372 PCDHB15Q9Y5E8 787 aa23.04■■□□□ 1.28
TNFRSF1A-212ENST00000539372 PDE4DIPQ5VU43 2346 aa23.03■■□□□ 1.28
TNFRSF1A-212ENST00000539372 CYP2D6P10635 497 aa23.03■■□□□ 1.28
TNFRSF1A-212ENST00000539372 FLT3LGP49771 235 aa23.03■■□□□ 1.28
TNFRSF1A-212ENST00000539372 ZYXQ15942 572 aaKnown RBP23.03■■□□□ 1.28
TNFRSF1A-212ENST00000539372 TSHZ3Q63HK5 1081 aa23.03■■□□□ 1.28
TNFRSF1A-212ENST00000539372 EMILIN3Q9NT22 766 aa23.03■■□□□ 1.28
TNFRSF1A-212ENST00000539372 ECHDC1Q9NTX5 307 aa23.03■■□□□ 1.28
TNFRSF1A-212ENST00000539372 BIN2Q9UBW5 565 aaPredicted RBP23.03■■□□□ 1.28
TNFRSF1A-212ENST00000539372 USP17L2Q6R6M4 530 aa23.02■■□□□ 1.28
TNFRSF1A-212ENST00000539372 P2RX7Q99572 595 aaKnown RBP23.02■■□□□ 1.28
TNFRSF1A-212ENST00000539372 FEZ1Q99689 392 aa23.02■■□□□ 1.28
TNFRSF1A-212ENST00000539372 PEX10O60683 326 aa23.01■■□□□ 1.27
TNFRSF1A-212ENST00000539372 HOXA7P31268 230 aaPredicted RBP23.01■■□□□ 1.27
TNFRSF1A-212ENST00000539372 GABPAQ06546 454 aa23.01■■□□□ 1.27
TNFRSF1A-212ENST00000539372 COA7Q96BR5 231 aa23.01■■□□□ 1.27
TNFRSF1A-212ENST00000539372 CABP5Q9NP86 173 aa23.01■■□□□ 1.27
TNFRSF1A-212ENST00000539372 TAOK2Q9UL54 1235 aa23.01■■□□□ 1.27
TNFRSF1A-212ENST00000539372 ADCY3O60266 1144 aa23■■□□□ 1.27
TNFRSF1A-212ENST00000539372 UBE3CQ15386 1083 aa23■■□□□ 1.27
TNFRSF1A-212ENST00000539372 SLC44A5Q8NCS7 719 aa23■■□□□ 1.27
TNFRSF1A-212ENST00000539372 SLAIN1Q8ND83 568 aa23■■□□□ 1.27
TNFRSF1A-212ENST00000539372 ACER1Q8TDN7 264 aa23■■□□□ 1.27
TNFRSF1A-212ENST00000539372 MKI67P46013 3256 aaKnown RBP23■■□□□ 1.27
TNFRSF1A-212ENST00000539372 MPHOSPH10O00566 681 aaKnown RBP22.99■■□□□ 1.27
TNFRSF1A-212ENST00000539372 CCL5P13501 91 aa22.99■■□□□ 1.27
TNFRSF1A-212ENST00000539372 ELNP15502 786 aa22.99■■□□□ 1.27
TNFRSF1A-212ENST00000539372 GUCY1A2P33402 732 aa22.99■■□□□ 1.27
TNFRSF1A-212ENST00000539372 HERVK_113P62684 666 aa22.99■■□□□ 1.27
TNFRSF1A-212ENST00000539372 PRPF38BQ5VTL8 546 aaKnown RBP22.99■■□□□ 1.27
TNFRSF1A-212ENST00000539372 ZSCAN25Q6NSZ9 544 aa22.99■■□□□ 1.27
TNFRSF1A-212ENST00000539372 DYNLL2Q96FJ2 89 aa22.99■■□□□ 1.27
TNFRSF1A-212ENST00000539372 GPATCH3Q96I76 525 aa22.99■■□□□ 1.27
TNFRSF1A-212ENST00000539372 UBXN2AP68543 259 aa22.98■■□□□ 1.27
TNFRSF1A-212ENST00000539372 SEPT2Q15019 361 aa22.98■■□□□ 1.27
TNFRSF1A-212ENST00000539372 CRBNQ96SW2 442 aa22.98■■□□□ 1.27
TNFRSF1A-212ENST00000539372 PUS7LQ9H0K6 701 aaKnown RBP22.98■■□□□ 1.27
TNFRSF1A-212ENST00000539372 TXNRD2Q9NNW7 524 aa22.98■■□□□ 1.27
TNFRSF1A-212ENST00000539372 ATP8A2Q9NTI2 1148 aa22.98■■□□□ 1.27
TNFRSF1A-212ENST00000539372 MORF4L1Q9UBU8 362 aa22.98■■□□□ 1.27
TNFRSF1A-212ENST00000539372 CYP2D7A0A087X1C5 515 aa22.97■■□□□ 1.27
TNFRSF1A-212ENST00000539372 SMIM22K7EJ46 135 aa22.97■■□□□ 1.27
TNFRSF1A-212ENST00000539372 RNF208Q9H0X6 261 aa22.97■■□□□ 1.27
TNFRSF1A-212ENST00000539372 SLC4A4Q9Y6R1 1079 aa22.97■■□□□ 1.27
TNFRSF1A-212ENST00000539372 IRF5Q13568 498 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms