RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 LPIN2Q92539 896 aa16.29■□□□□ 0.2
CACNB1-206ENST00000539338 MBD5Q9P267 1494 aa16.29■□□□□ 0.2
CACNB1-206ENST00000539338 PLEKHG3A1L390 1219 aa16.29■□□□□ 0.2
CACNB1-206ENST00000539338 GPATCH11Q8N954 259 aa16.29■□□□□ 0.2
CACNB1-206ENST00000539338 MLKLQ8NB16 471 aa16.29■□□□□ 0.2
CACNB1-206ENST00000539338 SPATA5Q8NB90 893 aa16.29■□□□□ 0.2
CACNB1-206ENST00000539338 SLC16A10Q8TF71 515 aa16.29■□□□□ 0.2
CACNB1-206ENST00000539338 SELENOSQ9BQE4 189 aa16.29■□□□□ 0.2
CACNB1-206ENST00000539338 TCHPQ9BT92 498 aa16.29■□□□□ 0.2
CACNB1-206ENST00000539338 PODXL2Q9NZ53 605 aa16.29■□□□□ 0.2
CACNB1-206ENST00000539338 HOXD10P28358 340 aa16.28■□□□□ 0.2
CACNB1-206ENST00000539338 TXKP42681 527 aa16.28■□□□□ 0.2
CACNB1-206ENST00000539338 TUBB4BP68371 445 aa16.28■□□□□ 0.2
CACNB1-206ENST00000539338 ERFEQ4G0M1 354 aa16.28■□□□□ 0.2
CACNB1-206ENST00000539338 HDXQ7Z353 690 aa16.28■□□□□ 0.2
CACNB1-206ENST00000539338 DSCC1Q9BVC3 393 aa16.28■□□□□ 0.2
CACNB1-206ENST00000539338 ECM2O94769 699 aaPredicted RBP16.28■□□□□ 0.2
CACNB1-206ENST00000539338 CSGALNACT2Q8N6G5 542 aa16.28■□□□□ 0.2
CACNB1-206ENST00000539338 NAPGQ99747 312 aaPredicted RBP16.28■□□□□ 0.2
CACNB1-206ENST00000539338 TLDC2A0PJX2 215 aa16.28■□□□□ 0.2
CACNB1-206ENST00000539338 NR1I2O75469 434 aa16.28■□□□□ 0.2
CACNB1-206ENST00000539338 YY1P25490 414 aa16.28■□□□□ 0.2
CACNB1-206ENST00000539338 POSTNQ15063 836 aa16.28■□□□□ 0.2
CACNB1-206ENST00000539338 NBPF11Q86T75 865 aa16.28■□□□□ 0.2
CACNB1-206ENST00000539338 GAS2L3Q86XJ1 694 aa16.28■□□□□ 0.2
CACNB1-206ENST00000539338 TTC6Q86TZ1 520 aa16.28■□□□□ 0.2
CACNB1-206ENST00000539338 CCDC65Q8IXS2 484 aa16.28■□□□□ 0.2
CACNB1-206ENST00000539338 MTMR6Q9Y217 621 aa16.28■□□□□ 0.2
CACNB1-206ENST00000539338 ERCC3P19447 782 aa16.27■□□□□ 0.2
CACNB1-206ENST00000539338 PAK1Q13153 545 aa16.27■□□□□ 0.2
CACNB1-206ENST00000539338 MTX1Q13505 466 aa16.27■□□□□ 0.2
CACNB1-206ENST00000539338 PNOCQ13519 176 aa16.27■□□□□ 0.2
CACNB1-206ENST00000539338 CCDC24Q8N4L8 307 aa16.27■□□□□ 0.2
CACNB1-206ENST00000539338 NBPF3Q9H094 633 aa16.27■□□□□ 0.2
CACNB1-206ENST00000539338 TAB2Q9NYJ8 693 aa16.27■□□□□ 0.2
CACNB1-206ENST00000539338 IBTKQ9P2D0 1353 aaPredicted RBP16.27■□□□□ 0.2
CACNB1-206ENST00000539338 GSTA5Q7RTV2 222 aa16.27■□□□□ 0.2
CACNB1-206ENST00000539338 PKD2L1Q9P0L9 805 aa16.27■□□□□ 0.2
CACNB1-206ENST00000539338 BEND3Q5T5X7 828 aa16.27■□□□□ 0.2
CACNB1-206ENST00000539338 CYP26C1Q6V0L0 522 aa16.27■□□□□ 0.2
CACNB1-206ENST00000539338 CCDC50Q8IVM0 306 aa16.27■□□□□ 0.2
CACNB1-206ENST00000539338 VPS72Q15906 364 aa16.27■□□□□ 0.19
CACNB1-206ENST00000539338 TBC1D22AQ8WUA7 517 aa16.27■□□□□ 0.19
CACNB1-206ENST00000539338 TSC1Q92574 1164 aa16.27■□□□□ 0.19
CACNB1-206ENST00000539338 XPO4Q9C0E2 1151 aaKnown RBP16.27■□□□□ 0.19
CACNB1-206ENST00000539338 IMPACTQ9P2X3 320 aa16.27■□□□□ 0.19
CACNB1-206ENST00000539338 KIF4AO95239 1232 aa16.26■□□□□ 0.19
CACNB1-206ENST00000539338 PRKG1Q13976 671 aa16.26■□□□□ 0.19
CACNB1-206ENST00000539338 MICALL1Q8N3F8 863 aa16.26■□□□□ 0.19
CACNB1-206ENST00000539338 VPS54Q9P1Q0 977 aa16.26■□□□□ 0.19
CACNB1-206ENST00000539338 CD2BP2O95400 341 aaKnown RBP16.26■□□□□ 0.19
CACNB1-206ENST00000539338 RNASE9P60153 205 aaKnown RBP16.26■□□□□ 0.19
CACNB1-206ENST00000539338 USP28Q96RU2 1077 aa16.26■□□□□ 0.19
CACNB1-206ENST00000539338 TSGA10Q9BZW7 698 aa16.26■□□□□ 0.19
CACNB1-206ENST00000539338 SSH2Q76I76 1423 aa16.26■□□□□ 0.19
CACNB1-206ENST00000539338 LOC102724428A0A0B4J2F2 783 aa16.26■□□□□ 0.19
CACNB1-206ENST00000539338 SIK1P57059 783 aa16.26■□□□□ 0.19
CACNB1-206ENST00000539338 PPP1R14CQ8TAE6 165 aa16.26■□□□□ 0.19
CACNB1-206ENST00000539338 ZSWIM6Q9HCJ5 1215 aa16.26■□□□□ 0.19
CACNB1-206ENST00000539338 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.26■□□□□ 0.19
CACNB1-206ENST00000539338 TTF2Q9UNY4 1162 aaKnown RBP16.26■□□□□ 0.19
CACNB1-206ENST00000539338 PLCB3Q01970 1234 aa16.26■□□□□ 0.19
CACNB1-206ENST00000539338 MYSM1Q5VVJ2 828 aa16.26■□□□□ 0.19
CACNB1-206ENST00000539338 CCDC25Q86WR0 208 aa16.26■□□□□ 0.19
CACNB1-206ENST00000539338 UIMC1Q96RL1 719 aa16.26■□□□□ 0.19
CACNB1-206ENST00000539338 MYO5CQ9NQX4 1742 aa16.26■□□□□ 0.19
CACNB1-206ENST00000539338 EBAG9O00559 213 aa16.26■□□□□ 0.19
CACNB1-206ENST00000539338 TNNC1P63316 161 aa16.26■□□□□ 0.19
CACNB1-206ENST00000539338 SP4Q02446 784 aa16.26■□□□□ 0.19
CACNB1-206ENST00000539338 CFAP58Q5T655 872 aa16.25■□□□□ 0.19
CACNB1-206ENST00000539338 CMTR1Q8N1G2 835 aaKnown RBP16.25■□□□□ 0.19
CACNB1-206ENST00000539338 FAM212AQ96EL1 285 aa16.25■□□□□ 0.19
CACNB1-206ENST00000539338 BLZF1Q9H2G9 400 aa16.25■□□□□ 0.19
CACNB1-206ENST00000539338 KDRP35968 1356 aa16.25■□□□□ 0.19
CACNB1-206ENST00000539338 ECE1P42892 770 aa16.25■□□□□ 0.19
CACNB1-206ENST00000539338 TRIM14Q14142 442 aa16.25■□□□□ 0.19
CACNB1-206ENST00000539338 CNNM4Q6P4Q7 775 aa16.25■□□□□ 0.19
CACNB1-206ENST00000539338 CCDC77Q9BR77 488 aa16.25■□□□□ 0.19
CACNB1-206ENST00000539338 NSRP1Q9H0G5 558 aaKnown RBP16.25■□□□□ 0.19
CACNB1-206ENST00000539338 IMPG2Q9BZV3 1241 aa16.25■□□□□ 0.19
CACNB1-206ENST00000539338 WDR17Q8IZU2 1322 aa16.25■□□□□ 0.19
CACNB1-206ENST00000539338 SAMD9LQ8IVG5 1584 aa16.25■□□□□ 0.19
CACNB1-206ENST00000539338 RPL13P26373 211 aaKnown RBP16.25■□□□□ 0.19
CACNB1-206ENST00000539338 FCHSD1Q86WN1 690 aa16.25■□□□□ 0.19
CACNB1-206ENST00000539338 SERTAD1Q9UHV2 236 aa16.25■□□□□ 0.19
CACNB1-206ENST00000539338 ZNF521Q96K83 1311 aa16.25■□□□□ 0.19
CACNB1-206ENST00000539338 ERVK-7P63135 1459 aa16.25■□□□□ 0.19
CACNB1-206ENST00000539338 ARHGAP6O43182 974 aa16.24■□□□□ 0.19
CACNB1-206ENST00000539338 CHMP2AO43633 222 aa16.24■□□□□ 0.19
CACNB1-206ENST00000539338 KRT9P35527 623 aa16.24■□□□□ 0.19
CACNB1-206ENST00000539338 ILDR1Q86SU0 546 aaPredicted RBP16.24■□□□□ 0.19
CACNB1-206ENST00000539338 FAM76AQ8TAV0 307 aa16.24■□□□□ 0.19
CACNB1-206ENST00000539338 JAKMIP2Q96AA8 810 aa16.24■□□□□ 0.19
CACNB1-206ENST00000539338 TUBBP07437 444 aa16.24■□□□□ 0.19
CACNB1-206ENST00000539338 DPH6Q7L8W6 267 aa16.24■□□□□ 0.19
CACNB1-206ENST00000539338 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.24■□□□□ 0.19
CACNB1-206ENST00000539338 PFKFB1P16118 471 aa16.24■□□□□ 0.19
CACNB1-206ENST00000539338 CCNA1P78396 465 aa16.24■□□□□ 0.19
CACNB1-206ENST00000539338 ZCCHC11Q5TAX3 1644 aaKnown RBP16.24■□□□□ 0.19
CACNB1-206ENST00000539338 ZBTB24O43167 697 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms