RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 DBN1Q16643 649 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 ALS2CLQ60I27 953 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 OR8K1Q8NGG5 319 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 CCDC85AQ96PX6 553 aaPredicted RBP7.67□□□□□ -1.18
SORT1-209ENST00000538502 ASIC3Q9UHC3 531 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 COL17A1Q9UMD9 1497 aaPredicted RBP7.67□□□□□ -1.18
SORT1-209ENST00000538502 EPHB4P54760 987 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 CCDC170Q8IYT3 715 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 TMEM63CQ9P1W3 806 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 DDX41Q9UJV9 622 aaKnown RBP7.66□□□□□ -1.18
SORT1-209ENST00000538502 NFE2L3Q9Y4A8 694 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 ARL1P40616 181 aaPredicted RBP7.66□□□□□ -1.18
SORT1-209ENST00000538502 DYNC1I2Q13409 638 aaKnown RBP7.66□□□□□ -1.18
SORT1-209ENST00000538502 NELFBQ8WX92 580 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 XPO4Q9C0E2 1151 aaKnown RBP7.66□□□□□ -1.18
SORT1-209ENST00000538502 SCOCQ9UIL1 159 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 JRKLQ9Y4A0 524 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 RGS12O14924 1447 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 MSH6P52701 1360 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 KDM5DQ9BY66 1539 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 GJC1P36383 396 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 UAP1Q16222 522 aaPredicted RBP7.66□□□□□ -1.18
SORT1-209ENST00000538502 C16orf71Q8IYS4 520 aaPredicted RBP7.66□□□□□ -1.18
SORT1-209ENST00000538502 TDRD7Q8NHU6 1098 aaKnown RBP7.66□□□□□ -1.18
SORT1-209ENST00000538502 TXLNGQ9NUQ3 528 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 PPP1R1BQ9UD71 204 aaPredicted RBP7.66□□□□□ -1.18
SORT1-209ENST00000538502 CDC23Q9UJX2 597 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 STK38LQ9Y2H1 464 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 LIG3P49916 1009 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 SLFNL1Q499Z3 407 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 AKAP4Q5JQC9 854 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 SLC9C2Q5TAH2 1124 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 VWA3AA6NCI4 1184 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 SGSM2O43147 1006 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 KRT15P19012 456 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 DCAF17Q5H9S7 520 aaPredicted RBP7.66□□□□□ -1.18
SORT1-209ENST00000538502 RASIP1Q5U651 963 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 KIAA1468Q9P260 1216 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 KCNG1Q9UIX4 513 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 ZNF215Q9UL58 517 aaPredicted RBP7.66□□□□□ -1.18
SORT1-209ENST00000538502 EIF3CLB5ME19 914 aaKnown RBP7.66□□□□□ -1.18
SORT1-209ENST00000538502 DKC1O60832 514 aaKnown RBP eCLIP7.66□□□□□ -1.18
SORT1-209ENST00000538502 DNM2P50570 870 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 NCBP1Q09161 790 aaKnown RBP7.66□□□□□ -1.18
SORT1-209ENST00000538502 EIF3CQ99613 913 aaKnown RBP7.66□□□□□ -1.18
SORT1-209ENST00000538502 CENPKQ9BS16 269 aa7.66□□□□□ -1.18
SORT1-209ENST00000538502 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.66□□□□□ -1.18
SORT1-209ENST00000538502 POLR2DO15514 142 aaKnown RBP7.65□□□□□ -1.18
SORT1-209ENST00000538502 DEUP1Q05D60 604 aa7.65□□□□□ -1.18
SORT1-209ENST00000538502 PDE1CQ14123 709 aaPredicted RBP7.65□□□□□ -1.18
SORT1-209ENST00000538502 PRR16Q569H4 304 aa7.65□□□□□ -1.18
SORT1-209ENST00000538502 MPRIPQ6WCQ1 1025 aa7.65□□□□□ -1.18
SORT1-209ENST00000538502 CCDC105Q8IYK2 499 aa7.65□□□□□ -1.18
SORT1-209ENST00000538502 PPP1R13BQ96KQ4 1090 aa7.65□□□□□ -1.18
SORT1-209ENST00000538502 ZMAT2Q96NC0 199 aaKnown RBP7.65□□□□□ -1.18
SORT1-209ENST00000538502 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.65□□□□□ -1.18
SORT1-209ENST00000538502 AMOTL2Q9Y2J4 779 aa7.65□□□□□ -1.18
SORT1-209ENST00000538502 CCDC151A5D8V7 595 aa7.65□□□□□ -1.18
SORT1-209ENST00000538502 COG7P83436 770 aa7.65□□□□□ -1.18
SORT1-209ENST00000538502 KLHL30Q0D2K2 578 aa7.65□□□□□ -1.18
SORT1-209ENST00000538502 LONRF2Q1L5Z9 754 aa7.65□□□□□ -1.18
SORT1-209ENST00000538502 NBPF9Q3BBW0 867 aa7.65□□□□□ -1.18
SORT1-209ENST00000538502 VTI1AQ96AJ9 217 aa7.65□□□□□ -1.18
SORT1-209ENST00000538502 NCAPGQ9BPX3 1015 aa7.65□□□□□ -1.18
SORT1-209ENST00000538502 MAGEF1Q9HAY2 307 aa7.65□□□□□ -1.18
SORT1-209ENST00000538502 CHPF2Q9P2E5 772 aa7.65□□□□□ -1.18
SORT1-209ENST00000538502 ANGPTL2Q9UKU9 493 aa7.65□□□□□ -1.18
SORT1-209ENST00000538502 MMS22LQ6ZRQ5 1243 aa7.65□□□□□ -1.18
SORT1-209ENST00000538502 KLHL7Q8IXQ5 586 aa7.65□□□□□ -1.18
SORT1-209ENST00000538502 CCDC13Q8IYE1 715 aa7.65□□□□□ -1.18
SORT1-209ENST00000538502 CCDC68Q9H2F9 335 aa7.65□□□□□ -1.18
SORT1-209ENST00000538502 HOXB7P09629 217 aa7.65□□□□□ -1.19
SORT1-209ENST00000538502 KRT3P12035 628 aa7.65□□□□□ -1.19
SORT1-209ENST00000538502 SKIP12755 728 aa7.65□□□□□ -1.19
SORT1-209ENST00000538502 IL9RQ01113 521 aa7.65□□□□□ -1.19
SORT1-209ENST00000538502 TRIM68Q6AZZ1 485 aa7.65□□□□□ -1.19
SORT1-209ENST00000538502 SNRKQ9NRH2 765 aa7.65□□□□□ -1.19
SORT1-209ENST00000538502 CTTNBP2NLQ9P2B4 639 aa7.65□□□□□ -1.19
SORT1-209ENST00000538502 ANGEL1Q9UNK9 670 aaKnown RBP7.65□□□□□ -1.19
SORT1-209ENST00000538502 IQSEC3Q9UPP2 1182 aaPredicted RBP7.65□□□□□ -1.19
SORT1-209ENST00000538502 TTC38Q5R3I4 469 aa7.65□□□□□ -1.19
SORT1-209ENST00000538502 KRT25Q7Z3Z0 450 aa7.65□□□□□ -1.19
SORT1-209ENST00000538502 SLF1Q9BQI6 1058 aa7.65□□□□□ -1.19
SORT1-209ENST00000538502 PDE11AQ9HCR9 933 aa7.65□□□□□ -1.19
SORT1-209ENST00000538502 GIPC1O14908 333 aa7.64□□□□□ -1.19
SORT1-209ENST00000538502 GADD45BO75293 160 aaPredicted RBP7.64□□□□□ -1.19
SORT1-209ENST00000538502 KIF21AQ7Z4S6 1674 aa7.64□□□□□ -1.19
SORT1-209ENST00000538502 MAP3K5Q99683 1374 aa7.64□□□□□ -1.19
SORT1-209ENST00000538502 STX8Q9UNK0 236 aa7.64□□□□□ -1.19
SORT1-209ENST00000538502 KDM3AQ9Y4C1 1321 aa7.64□□□□□ -1.19
SORT1-209ENST00000538502 H7C1D1 291 aa7.64□□□□□ -1.19
SORT1-209ENST00000538502 RNF8O76064 485 aa7.64□□□□□ -1.19
SORT1-209ENST00000538502 SMTNP53814 917 aa7.64□□□□□ -1.19
SORT1-209ENST00000538502 GSDMBQ8TAX9 411 aa7.64□□□□□ -1.19
SORT1-209ENST00000538502 ZC3H15Q8WU90 426 aaKnown RBP7.64□□□□□ -1.19
SORT1-209ENST00000538502 PPIP5K1Q6PFW1 1433 aa7.64□□□□□ -1.19
SORT1-209ENST00000538502 PARP1P09874 1014 aaKnown RBP7.64□□□□□ -1.19
SORT1-209ENST00000538502 CCT5P48643 541 aa7.64□□□□□ -1.19
SORT1-209ENST00000538502 PDCD2Q16342 344 aaPredicted RBP7.64□□□□□ -1.19
SORT1-209ENST00000538502 C17orf53Q8N3J3 647 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms