RNA–Protein interactions for RNA: ENST00000538354.5

TULP3-203, Transcript of tubby like protein 3, humanhuman

TSL 1 (best)

Gene TULP3, Length 1,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP3-203ENST00000538354 TRIM34Q9BYJ4 488 aa23.74■■□□□ 1.39
TULP3-203ENST00000538354 RNF208Q9H0X6 261 aa23.74■■□□□ 1.39
TULP3-203ENST00000538354 PNMA3Q9UL41 463 aa23.74■■□□□ 1.39
TULP3-203ENST00000538354 ADCY3O60266 1144 aa23.73■■□□□ 1.39
TULP3-203ENST00000538354 SLAIN1Q8ND83 568 aa23.73■■□□□ 1.39
TULP3-203ENST00000538354 LRRCC1Q9C099 1032 aa23.73■■□□□ 1.39
TULP3-203ENST00000538354 UNC93B1Q9H1C4 597 aa23.73■■□□□ 1.39
TULP3-203ENST00000538354 ASCC2Q9H1I8 757 aaPredicted RBP23.73■■□□□ 1.39
TULP3-203ENST00000538354 AS3MTQ9HBK9 375 aa23.73■■□□□ 1.39
TULP3-203ENST00000538354 PEX10O60683 326 aa23.72■■□□□ 1.39
TULP3-203ENST00000538354 UBXN2AP68543 259 aa23.72■■□□□ 1.39
TULP3-203ENST00000538354 SH3D19Q5HYK7 790 aa23.72■■□□□ 1.39
TULP3-203ENST00000538354 FOXP4Q8IVH2 680 aaPredicted RBP23.72■■□□□ 1.39
TULP3-203ENST00000538354 TBC1D2Q9BYX2 928 aa23.72■■□□□ 1.39
TULP3-203ENST00000538354 ASNSP08243 561 aa23.71■■□□□ 1.39
TULP3-203ENST00000538354 IFIT2P09913 472 aaKnown RBP23.71■■□□□ 1.39
TULP3-203ENST00000538354 USP5P45974 858 aa23.71■■□□□ 1.39
TULP3-203ENST00000538354 FAM110CQ1W6H9 321 aa23.71■■□□□ 1.39
TULP3-203ENST00000538354 METTL16Q86W50 562 aaKnown RBP23.71■■□□□ 1.39
TULP3-203ENST00000538354 WDR18Q9BV38 432 aa23.71■■□□□ 1.39
TULP3-203ENST00000538354 INHAP05111 366 aa23.7■■□□□ 1.38
TULP3-203ENST00000538354 HLA-DOAP06340 250 aa23.7■■□□□ 1.38
TULP3-203ENST00000538354 ZBTB21Q9ULJ3 1066 aa23.7■■□□□ 1.38
TULP3-203ENST00000538354 CEP290O15078 2479 aa23.69■■□□□ 1.38
TULP3-203ENST00000538354 IGSF3O75054 1194 aa23.69■■□□□ 1.38
TULP3-203ENST00000538354 GJB1P08034 283 aa23.69■■□□□ 1.38
TULP3-203ENST00000538354 GJA8P48165 433 aa23.69■■□□□ 1.38
TULP3-203ENST00000538354 BACE1P56817 501 aa23.69■■□□□ 1.38
TULP3-203ENST00000538354 PABPC4Q13310 644 aaKnown RBP eCLIP23.69■■□□□ 1.38
TULP3-203ENST00000538354 HDAC1Q13547 482 aaPredicted RBP23.69■■□□□ 1.38
TULP3-203ENST00000538354 HABP4Q5JVS0 413 aaKnown RBP23.69■■□□□ 1.38
TULP3-203ENST00000538354 EXOC6Q8TAG9 804 aa23.69■■□□□ 1.38
TULP3-203ENST00000538354 COA7Q96BR5 231 aa23.69■■□□□ 1.38
TULP3-203ENST00000538354 GCC1Q96CN9 775 aa23.69■■□□□ 1.38
TULP3-203ENST00000538354 GCLCP48506 637 aaPredicted RBP23.68■■□□□ 1.38
TULP3-203ENST00000538354 MAP3K12Q12852 859 aa23.68■■□□□ 1.38
TULP3-203ENST00000538354 TMOD4Q9NZQ9 345 aa23.68■■□□□ 1.38
TULP3-203ENST00000538354 GH2P01242 217 aa23.67■■□□□ 1.38
TULP3-203ENST00000538354 IRX3P78415 501 aaPredicted RBP23.67■■□□□ 1.38
TULP3-203ENST00000538354 IRF5Q13568 498 aa23.67■■□□□ 1.38
TULP3-203ENST00000538354 U2AF1L4Q8WU68 220 aaKnown RBP23.67■■□□□ 1.38
TULP3-203ENST00000538354 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.67■■□□□ 1.38
TULP3-203ENST00000538354 P2RX7Q99572 595 aaKnown RBP23.67■■□□□ 1.38
TULP3-203ENST00000538354 USP17L10C9JJH3 530 aa23.66■■□□□ 1.38
TULP3-203ENST00000538354 H0YGN5 161 aa23.66■■□□□ 1.38
TULP3-203ENST00000538354 NKX2-3Q8TAU0 364 aa23.66■■□□□ 1.38
TULP3-203ENST00000538354 PXYLP1Q8TE99 480 aa23.66■■□□□ 1.38
TULP3-203ENST00000538354 DNAJC2Q99543 621 aaKnown RBP23.66■■□□□ 1.38
TULP3-203ENST00000538354 NAV1Q8NEY1 1877 aa23.66■■□□□ 1.38
TULP3-203ENST00000538354 PLXNB2O15031 1838 aa23.66■■□□□ 1.38
TULP3-203ENST00000538354 SMARCA5O60264 1052 aaPredicted RBP23.65■■□□□ 1.38
TULP3-203ENST00000538354 DPF3Q92784 378 aa23.65■■□□□ 1.38
TULP3-203ENST00000538354 EDC3Q96F86 508 aaKnown RBP23.65■■□□□ 1.38
TULP3-203ENST00000538354 RIOK1Q9BRS2 568 aaKnown RBP23.65■■□□□ 1.38
TULP3-203ENST00000538354 DDX60LQ5H9U9 1706 aaKnown RBP23.64■■□□□ 1.38
TULP3-203ENST00000538354 PDE6AP16499 860 aa23.64■■□□□ 1.37
TULP3-203ENST00000538354 EVX2Q03828 476 aa23.64■■□□□ 1.37
TULP3-203ENST00000538354 ZYXQ15942 572 aaKnown RBP23.64■■□□□ 1.37
TULP3-203ENST00000538354 UBE2Q1Q7Z7E8 422 aa23.64■■□□□ 1.37
TULP3-203ENST00000538354 DEFB118Q96PH6 123 aa23.64■■□□□ 1.37
TULP3-203ENST00000538354 TXNRD2Q9NNW7 524 aa23.64■■□□□ 1.37
TULP3-203ENST00000538354 EMILIN3Q9NT22 766 aa23.64■■□□□ 1.37
TULP3-203ENST00000538354 COLQQ9Y215 455 aaPredicted RBP23.64■■□□□ 1.37
TULP3-203ENST00000538354 MAGEB6P1A0A0J9YX57 407 aa23.63■■□□□ 1.37
TULP3-203ENST00000538354 C19orf81C9J6K1 198 aa23.63■■□□□ 1.37
TULP3-203ENST00000538354 GOLIM4O00461 696 aa23.63■■□□□ 1.37
TULP3-203ENST00000538354 FARP2O94887 1054 aaPredicted RBP23.63■■□□□ 1.37
TULP3-203ENST00000538354 SGPL1O95470 568 aa23.63■■□□□ 1.37
TULP3-203ENST00000538354 HOXA7P31268 230 aaPredicted RBP23.63■■□□□ 1.37
TULP3-203ENST00000538354 PLCD1P51178 756 aa23.63■■□□□ 1.37
TULP3-203ENST00000538354 HERVK_113P62684 666 aa23.63■■□□□ 1.37
TULP3-203ENST00000538354 TRIM32Q13049 653 aa23.63■■□□□ 1.37
TULP3-203ENST00000538354 MORF4L1Q9UBU8 362 aa23.63■■□□□ 1.37
TULP3-203ENST00000538354 SERPINB13Q9UIV8 391 aa23.63■■□□□ 1.37
TULP3-203ENST00000538354 ATP5JP18859 108 aa23.62■■□□□ 1.37
TULP3-203ENST00000538354 SLFNL1Q499Z3 407 aa23.62■■□□□ 1.37
TULP3-203ENST00000538354 SLC9C2Q5TAH2 1124 aa23.62■■□□□ 1.37
TULP3-203ENST00000538354 TATDN1Q6P1N9 297 aa23.62■■□□□ 1.37
TULP3-203ENST00000538354 GINM1Q9NU53 330 aa23.62■■□□□ 1.37
TULP3-203ENST00000538354 GJD2Q9UKL4 321 aa23.62■■□□□ 1.37
TULP3-203ENST00000538354 ZNF532Q9HCE3 1301 aa23.61■■□□□ 1.37
TULP3-203ENST00000538354 RAB3GAP1Q15042 981 aa23.61■■□□□ 1.37
TULP3-203ENST00000538354 TTF1Q15361 905 aaPredicted RBP23.61■■□□□ 1.37
TULP3-203ENST00000538354 USP17L2Q6R6M4 530 aa23.61■■□□□ 1.37
TULP3-203ENST00000538354 POTEEQ6S8J3 1075 aa23.61■■□□□ 1.37
TULP3-203ENST00000538354 CERS3Q8IU89 383 aa23.61■■□□□ 1.37
TULP3-203ENST00000538354 PAGR1Q9BTK6 254 aa23.61■■□□□ 1.37
TULP3-203ENST00000538354 TFRCP02786 760 aaKnown RBP23.6■■□□□ 1.37
TULP3-203ENST00000538354 POLR3DP05423 398 aaPredicted RBP23.6■■□□□ 1.37
TULP3-203ENST00000538354 CYP2B6P20813 491 aa23.6■■□□□ 1.37
TULP3-203ENST00000538354 SHMT1P34896 483 aa23.6■■□□□ 1.37
TULP3-203ENST00000538354 Q3C1V9 767 aa23.6■■□□□ 1.37
TULP3-203ENST00000538354 CERKLQ49MI3 558 aaPredicted RBP23.6■■□□□ 1.37
TULP3-203ENST00000538354 TMED8Q6PL24 325 aaPredicted RBP23.6■■□□□ 1.37
TULP3-203ENST00000538354 TTC6Q86TZ1 520 aa23.6■■□□□ 1.37
TULP3-203ENST00000538354 ACER1Q8TDN7 264 aa23.6■■□□□ 1.37
TULP3-203ENST00000538354 FEZ1Q99689 392 aa23.6■■□□□ 1.37
TULP3-203ENST00000538354 EHD4Q9H223 541 aa23.6■■□□□ 1.37
TULP3-203ENST00000538354 RWDD1Q9H446 243 aaPredicted RBP23.6■■□□□ 1.37
TULP3-203ENST00000538354 RBPJLQ9UBG7 517 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms