RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 ZBTB47Q9UFB7 747 aaPredicted RBP25.9■■□□□ 1.74
CCDC78-215ENST00000538176 ZBTB21Q9ULJ3 1066 aa25.9■■□□□ 1.74
CCDC78-215ENST00000538176 ATAD5Q96QE3 1844 aa25.9■■□□□ 1.74
CCDC78-215ENST00000538176 SIPA1L1O43166 1804 aa25.89■■□□□ 1.74
CCDC78-215ENST00000538176 FMNL1O95466 1100 aaPredicted RBP25.89■■□□□ 1.74
CCDC78-215ENST00000538176 GCLCP48506 637 aaPredicted RBP25.89■■□□□ 1.74
CCDC78-215ENST00000538176 HMGCS2P54868 508 aa25.89■■□□□ 1.74
CCDC78-215ENST00000538176 FCGRTP55899 365 aa25.89■■□□□ 1.74
CCDC78-215ENST00000538176 LRRFIP1Q32MZ4 808 aaKnown RBP25.89■■□□□ 1.74
CCDC78-215ENST00000538176 CERKLQ49MI3 558 aaPredicted RBP25.89■■□□□ 1.74
CCDC78-215ENST00000538176 CABP5Q9NP86 173 aa25.89■■□□□ 1.74
CCDC78-215ENST00000538176 TTC41PQ6P2S7 1318 aa25.88■■□□□ 1.73
CCDC78-215ENST00000538176 ERC2O15083 957 aa25.88■■□□□ 1.73
CCDC78-215ENST00000538176 CAP1Q01518 475 aa25.88■■□□□ 1.73
CCDC78-215ENST00000538176 SLC9C1Q4G0N8 1177 aa25.88■■□□□ 1.73
CCDC78-215ENST00000538176 AMOTL1Q8IY63 956 aa25.88■■□□□ 1.73
CCDC78-215ENST00000538176 DCP1AQ9NPI6 582 aaPredicted RBP25.88■■□□□ 1.73
CCDC78-215ENST00000538176 GDF11O95390 407 aa25.87■■□□□ 1.73
CCDC78-215ENST00000538176 LCORLQ8N3X6 602 aa25.87■■□□□ 1.73
CCDC78-215ENST00000538176 ARHGAP39Q9C0H5 1083 aa25.87■■□□□ 1.73
CCDC78-215ENST00000538176 SRRDQ9UH36 339 aa25.87■■□□□ 1.73
CCDC78-215ENST00000538176 ZFYP08048 801 aaPredicted RBP25.86■■□□□ 1.73
CCDC78-215ENST00000538176 HOXA7P31268 230 aaPredicted RBP25.86■■□□□ 1.73
CCDC78-215ENST00000538176 PLCD1P51178 756 aa25.86■■□□□ 1.73
CCDC78-215ENST00000538176 MTMR2Q13614 643 aa25.86■■□□□ 1.73
CCDC78-215ENST00000538176 TREML2Q5T2D2 321 aa25.86■■□□□ 1.73
CCDC78-215ENST00000538176 KBTBD3Q8NAB2 608 aa25.86■■□□□ 1.73
CCDC78-215ENST00000538176 GCC1Q96CN9 775 aa25.86■■□□□ 1.73
CCDC78-215ENST00000538176 CRBNQ96SW2 442 aa25.86■■□□□ 1.73
CCDC78-215ENST00000538176 SWAP70Q9UH65 585 aa25.86■■□□□ 1.73
CCDC78-215ENST00000538176 PTCH2Q9Y6C5 1203 aa25.86■■□□□ 1.73
CCDC78-215ENST00000538176 MBD4O95243 580 aa25.85■■□□□ 1.73
CCDC78-215ENST00000538176 GH2P01242 217 aa25.85■■□□□ 1.73
CCDC78-215ENST00000538176 GABPAQ06546 454 aa25.85■■□□□ 1.73
CCDC78-215ENST00000538176 FAM110CQ1W6H9 321 aa25.85■■□□□ 1.73
CCDC78-215ENST00000538176 ABCB5Q2M3G0 1257 aa25.85■■□□□ 1.73
CCDC78-215ENST00000538176 SLC4A8Q2Y0W8 1093 aa25.85■■□□□ 1.73
CCDC78-215ENST00000538176 SDR42E1Q8WUS8 393 aa25.85■■□□□ 1.73
CCDC78-215ENST00000538176 TRIM47Q96LD4 638 aa25.85■■□□□ 1.73
CCDC78-215ENST00000538176 TMEM106CQ9BVX2 250 aa25.85■■□□□ 1.73
CCDC78-215ENST00000538176 ARMT1Q9H993 441 aa25.85■■□□□ 1.73
CCDC78-215ENST00000538176 USP14P54578 494 aa25.84■■□□□ 1.73
CCDC78-215ENST00000538176 HDAC1Q13547 482 aaPredicted RBP25.84■■□□□ 1.73
CCDC78-215ENST00000538176 USP17L2Q6R6M4 530 aa25.84■■□□□ 1.73
CCDC78-215ENST00000538176 GLRX3O76003 335 aaKnown RBP25.83■■□□□ 1.73
CCDC78-215ENST00000538176 JAG1P78504 1218 aa25.83■■□□□ 1.73
CCDC78-215ENST00000538176 RAET1EQ8TD07 263 aa25.83■■□□□ 1.73
CCDC78-215ENST00000538176 ZNF333Q96JL9 665 aa25.83■■□□□ 1.73
CCDC78-215ENST00000538176 ASCC2Q9H1I8 757 aaPredicted RBP25.83■■□□□ 1.73
CCDC78-215ENST00000538176 LOC285556D6RIA3 1793 aa25.82■■□□□ 1.72
CCDC78-215ENST00000538176 SHMT1P34896 483 aa25.82■■□□□ 1.72
CCDC78-215ENST00000538176 IRX3P78415 501 aaPredicted RBP25.82■■□□□ 1.72
CCDC78-215ENST00000538176 GTF3C2Q8WUA4 911 aaPredicted RBP25.82■■□□□ 1.72
CCDC78-215ENST00000538176 RAB3GAP1Q15042 981 aa25.81■■□□□ 1.72
CCDC78-215ENST00000538176 ANKRD13CQ8N6S4 541 aa25.81■■□□□ 1.72
CCDC78-215ENST00000538176 SLC4A4Q9Y6R1 1079 aa25.81■■□□□ 1.72
CCDC78-215ENST00000538176 MYPNQ86TC9 1320 aa25.81■■□□□ 1.72
CCDC78-215ENST00000538176 MYH7P12883 1935 aa25.8■■□□□ 1.72
CCDC78-215ENST00000538176 CTGFP29279 349 aa25.8■■□□□ 1.72
CCDC78-215ENST00000538176 GIMAP6Q6P9H5 292 aa25.8■■□□□ 1.72
CCDC78-215ENST00000538176 COA7Q96BR5 231 aa25.8■■□□□ 1.72
CCDC78-215ENST00000538176 C12orf42Q96LP6 360 aa25.8■■□□□ 1.72
CCDC78-215ENST00000538176 CCDC17Q96LX7 622 aa25.8■■□□□ 1.72
CCDC78-215ENST00000538176 FEZ1Q99689 392 aa25.8■■□□□ 1.72
CCDC78-215ENST00000538176 KIAA1683Q9H0B3 1180 aa25.8■■□□□ 1.72
CCDC78-215ENST00000538176 PUS7LQ9H0K6 701 aaKnown RBP25.8■■□□□ 1.72
CCDC78-215ENST00000538176 NAV1Q8NEY1 1877 aa25.79■■□□□ 1.72
CCDC78-215ENST00000538176 TNPO2O14787 897 aaKnown RBP25.79■■□□□ 1.72
CCDC78-215ENST00000538176 RNF113AO15541 343 aaKnown RBP25.79■■□□□ 1.72
CCDC78-215ENST00000538176 C12orf60Q5U649 245 aa25.79■■□□□ 1.72
CCDC78-215ENST00000538176 APPBP2Q92624 585 aa25.79■■□□□ 1.72
CCDC78-215ENST00000538176 PRKAB2O43741 272 aa25.78■■□□□ 1.72
CCDC78-215ENST00000538176 GNAT2P19087 354 aa25.78■■□□□ 1.72
CCDC78-215ENST00000538176 MX1P20591 662 aa25.78■■□□□ 1.72
CCDC78-215ENST00000538176 GRK4P32298 578 aa25.78■■□□□ 1.72
CCDC78-215ENST00000538176 ANKRD45Q5TZF3 282 aa25.78■■□□□ 1.72
CCDC78-215ENST00000538176 EMILIN3Q9NT22 766 aa25.78■■□□□ 1.72
CCDC78-215ENST00000538176 DDX60LQ5H9U9 1706 aaKnown RBP25.77■■□□□ 1.72
CCDC78-215ENST00000538176 USP17L12C9JPN9 530 aa25.77■■□□□ 1.72
CCDC78-215ENST00000538176 USP17L21D6R901 530 aa25.77■■□□□ 1.72
CCDC78-215ENST00000538176 SLFNL1Q499Z3 407 aa25.77■■□□□ 1.72
CCDC78-215ENST00000538176 TMEM179Q6ZVK1 233 aa25.77■■□□□ 1.72
CCDC78-215ENST00000538176 SLAIN1Q8ND83 568 aa25.77■■□□□ 1.72
CCDC78-215ENST00000538176 STRBPQ96SI9 672 aaKnown RBP25.77■■□□□ 1.72
CCDC78-215ENST00000538176 RWDD1Q9H446 243 aaPredicted RBP25.77■■□□□ 1.72
CCDC78-215ENST00000538176 ARPP21Q9UBL0 812 aaPredicted RBP25.77■■□□□ 1.72
CCDC78-215ENST00000538176 MORF4L1Q9UBU8 362 aa25.77■■□□□ 1.72
CCDC78-215ENST00000538176 IRF5Q13568 498 aa25.76■■□□□ 1.71
CCDC78-215ENST00000538176 SHROOM1Q2M3G4 852 aaPredicted RBP25.76■■□□□ 1.71
CCDC78-215ENST00000538176 PI4K2BQ8TCG2 481 aa25.76■■□□□ 1.71
CCDC78-215ENST00000538176 PXYLP1Q8TE99 480 aa25.76■■□□□ 1.71
CCDC78-215ENST00000538176 P2RX7Q99572 595 aaKnown RBP25.76■■□□□ 1.71
CCDC78-215ENST00000538176 MGAMO43451 1857 aa25.75■■□□□ 1.71
CCDC78-215ENST00000538176 USP17L15C9J2P7 530 aa25.75■■□□□ 1.71
CCDC78-215ENST00000538176 USP17L13C9JLJ4 530 aa25.75■■□□□ 1.71
CCDC78-215ENST00000538176 USP17L11C9JVI0 530 aa25.75■■□□□ 1.71
CCDC78-215ENST00000538176 USP17L18D6R9N7 530 aa25.75■■□□□ 1.71
CCDC78-215ENST00000538176 USP17L22D6RA61 530 aa25.75■■□□□ 1.71
CCDC78-215ENST00000538176 USP17L17D6RBQ6 530 aa25.75■■□□□ 1.71
CCDC78-215ENST00000538176 USP17L19D6RCP7 530 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms