RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 HABP4Q5JVS0 413 aaKnown RBP11.8□□□□□ -0.52
CHD4-207ENST00000537634 METTL16Q86W50 562 aaKnown RBP11.8□□□□□ -0.52
CHD4-207ENST00000537634 MAGEB6Q8N7X4 407 aa11.8□□□□□ -0.52
CHD4-207ENST00000537634 MIGA1Q8NAN2 632 aa11.8□□□□□ -0.52
CHD4-207ENST00000537634 PXYLP1Q8TE99 480 aa11.8□□□□□ -0.52
CHD4-207ENST00000537634 U2AF1L4Q8WU68 220 aaKnown RBP11.8□□□□□ -0.52
CHD4-207ENST00000537634 UNC93B1Q9H1C4 597 aa11.8□□□□□ -0.52
CHD4-207ENST00000537634 ASCC2Q9H1I8 757 aaPredicted RBP11.8□□□□□ -0.52
CHD4-207ENST00000537634 GINM1Q9NU53 330 aa11.8□□□□□ -0.52
CHD4-207ENST00000537634 NDUFB9Q9Y6M9 179 aa11.8□□□□□ -0.52
CHD4-207ENST00000537634 DOCK3Q8IZD9 2030 aa11.79□□□□□ -0.52
CHD4-207ENST00000537634 TMED8Q6PL24 325 aaPredicted RBP11.79□□□□□ -0.52
CHD4-207ENST00000537634 ZBTB21Q9ULJ3 1066 aa11.79□□□□□ -0.52
CHD4-207ENST00000537634 NAV1Q8NEY1 1877 aa11.78□□□□□ -0.52
CHD4-207ENST00000537634 C19orf81C9J6K1 198 aa11.78□□□□□ -0.52
CHD4-207ENST00000537634 USP17L10C9JJH3 530 aa11.78□□□□□ -0.52
CHD4-207ENST00000537634 H0YGN5 161 aa11.78□□□□□ -0.52
CHD4-207ENST00000537634 HMMRO75330 724 aa11.78□□□□□ -0.52
CHD4-207ENST00000537634 FARP2O94887 1054 aaPredicted RBP11.78□□□□□ -0.52
CHD4-207ENST00000537634 JAG1P78504 1218 aa11.78□□□□□ -0.52
CHD4-207ENST00000537634 TTF1Q15361 905 aaPredicted RBP11.78□□□□□ -0.52
CHD4-207ENST00000537634 SHROOM1Q2M3G4 852 aaPredicted RBP11.78□□□□□ -0.52
CHD4-207ENST00000537634 RHPN1Q8TCX5 695 aa11.78□□□□□ -0.52
CHD4-207ENST00000537634 DPF3Q92784 378 aa11.78□□□□□ -0.52
CHD4-207ENST00000537634 HTATIP2Q9BUP3 242 aa11.78□□□□□ -0.52
CHD4-207ENST00000537634 ANTXR1Q9H6X2 564 aa11.78□□□□□ -0.52
CHD4-207ENST00000537634 IL1RAPL2Q9NP60 686 aa11.78□□□□□ -0.52
CHD4-207ENST00000537634 BRCA2P51587 3418 aa11.78□□□□□ -0.52
CHD4-207ENST00000537634 APBB1O00213 710 aa11.77□□□□□ -0.53
CHD4-207ENST00000537634 SGPL1O95470 568 aa11.77□□□□□ -0.53
CHD4-207ENST00000537634 GH2P01242 217 aa11.77□□□□□ -0.53
CHD4-207ENST00000537634 HOXA7P31268 230 aaPredicted RBP11.77□□□□□ -0.53
CHD4-207ENST00000537634 CLASRPQ8N2M8 674 aaKnown RBP11.77□□□□□ -0.53
CHD4-207ENST00000537634 KIF1BPQ96EK5 621 aa11.77□□□□□ -0.53
CHD4-207ENST00000537634 DEFB118Q96PH6 123 aa11.77□□□□□ -0.53
CHD4-207ENST00000537634 FEZ1Q99689 392 aa11.77□□□□□ -0.53
CHD4-207ENST00000537634 EHD4Q9H223 541 aa11.77□□□□□ -0.53
CHD4-207ENST00000537634 MORF4L1Q9UBU8 362 aa11.77□□□□□ -0.53
CHD4-207ENST00000537634 SERPINB13Q9UIV8 391 aa11.77□□□□□ -0.53
CHD4-207ENST00000537634 DDX19BQ9UMR2 479 aa11.77□□□□□ -0.53
CHD4-207ENST00000537634 MKI67P46013 3256 aaKnown RBP11.77□□□□□ -0.53
CHD4-207ENST00000537634 DDX60LQ5H9U9 1706 aaKnown RBP11.77□□□□□ -0.53
CHD4-207ENST00000537634 TFRCP02786 760 aaKnown RBP11.76□□□□□ -0.53
CHD4-207ENST00000537634 HMGCRP04035 888 aa11.76□□□□□ -0.53
CHD4-207ENST00000537634 IFIT2P09913 472 aaKnown RBP11.76□□□□□ -0.53
CHD4-207ENST00000537634 CAPN2P17655 700 aa11.76□□□□□ -0.53
CHD4-207ENST00000537634 HERVK_113P62684 666 aa11.76□□□□□ -0.53
CHD4-207ENST00000537634 USP17L2Q6R6M4 530 aa11.76□□□□□ -0.53
CHD4-207ENST00000537634 UBE2Q1Q7Z7E8 422 aa11.76□□□□□ -0.53
CHD4-207ENST00000537634 TTC6Q86TZ1 520 aa11.76□□□□□ -0.53
CHD4-207ENST00000537634 RPAP2Q8IXW5 612 aaPredicted RBP11.76□□□□□ -0.53
CHD4-207ENST00000537634 P2RX7Q99572 595 aaKnown RBP11.76□□□□□ -0.53
CHD4-207ENST00000537634 BCL11AQ9H165 835 aa11.76□□□□□ -0.53
CHD4-207ENST00000537634 CHMP4BQ9H444 224 aaKnown RBP11.76□□□□□ -0.53
CHD4-207ENST00000537634 PAK6Q9NQU5 681 aaPredicted RBP11.76□□□□□ -0.53
CHD4-207ENST00000537634 COLQQ9Y215 455 aaPredicted RBP11.76□□□□□ -0.53
CHD4-207ENST00000537634 COG6Q9Y2V7 657 aa11.76□□□□□ -0.53
CHD4-207ENST00000537634 PLXNB2O15031 1838 aa11.75□□□□□ -0.53
CHD4-207ENST00000537634 CEP290O15078 2479 aa11.75□□□□□ -0.53
CHD4-207ENST00000537634 MAGEB6P1A0A0J9YX57 407 aa11.75□□□□□ -0.53
CHD4-207ENST00000537634 PDE6AP16499 860 aa11.75□□□□□ -0.53
CHD4-207ENST00000537634 RAB3GAP1Q15042 981 aa11.75□□□□□ -0.53
CHD4-207ENST00000537634 CERKLQ49MI3 558 aaPredicted RBP11.75□□□□□ -0.53
CHD4-207ENST00000537634 SLC9C2Q5TAH2 1124 aa11.75□□□□□ -0.53
CHD4-207ENST00000537634 TATDN1Q6P1N9 297 aa11.75□□□□□ -0.53
CHD4-207ENST00000537634 CCAR1Q8IX12 1150 aaKnown RBP11.75□□□□□ -0.53
CHD4-207ENST00000537634 GPRC5AQ8NFJ5 357 aa11.75□□□□□ -0.53
CHD4-207ENST00000537634 GTF3C2Q8WUA4 911 aaPredicted RBP11.75□□□□□ -0.53
CHD4-207ENST00000537634 SOCS4Q8WXH5 440 aa11.75□□□□□ -0.53
CHD4-207ENST00000537634 DNAJC2Q99543 621 aaKnown RBP11.75□□□□□ -0.53
CHD4-207ENST00000537634 CRNKL1Q9BZJ0 848 aaKnown RBP11.75□□□□□ -0.53
CHD4-207ENST00000537634 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.75□□□□□ -0.53
CHD4-207ENST00000537634 NR2E3Q9Y5X4 410 aa11.75□□□□□ -0.53
CHD4-207ENST00000537634 GOLIM4O00461 696 aa11.74□□□□□ -0.53
CHD4-207ENST00000537634 RAB11FIP3O75154 756 aa11.74□□□□□ -0.53
CHD4-207ENST00000537634 POLR3DP05423 398 aaPredicted RBP11.74□□□□□ -0.53
CHD4-207ENST00000537634 MAPK4P31152 587 aa11.74□□□□□ -0.53
CHD4-207ENST00000537634 ERVK-9P63128 1117 aa11.74□□□□□ -0.53
CHD4-207ENST00000537634 ERVK-24P63145 666 aa11.74□□□□□ -0.53
CHD4-207ENST00000537634 PDE3AQ14432 1141 aa11.74□□□□□ -0.53
CHD4-207ENST00000537634 ZYXQ15942 572 aaKnown RBP11.74□□□□□ -0.53
CHD4-207ENST00000537634 ABCB5Q2M3G0 1257 aa11.74□□□□□ -0.53
CHD4-207ENST00000537634 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.74□□□□□ -0.53
CHD4-207ENST00000537634 NUDT12Q9BQG2 462 aa11.74□□□□□ -0.53
CHD4-207ENST00000537634 RIOK1Q9BRS2 568 aaKnown RBP11.74□□□□□ -0.53
CHD4-207ENST00000537634 PAGR1Q9BTK6 254 aa11.74□□□□□ -0.53
CHD4-207ENST00000537634 TXNRD2Q9NNW7 524 aa11.74□□□□□ -0.53
CHD4-207ENST00000537634 CABP5Q9NP86 173 aa11.74□□□□□ -0.53
CHD4-207ENST00000537634 EMILIN3Q9NT22 766 aa11.74□□□□□ -0.53
CHD4-207ENST00000537634 ZBTB40Q9NUA8 1239 aa11.74□□□□□ -0.53
CHD4-207ENST00000537634 GJD2Q9UKL4 321 aa11.74□□□□□ -0.53
CHD4-207ENST00000537634 PEX10O60683 326 aa11.73□□□□□ -0.53
CHD4-207ENST00000537634 FXR1P51114 621 aaKnown RBP eCLIP11.73□□□□□ -0.531e-6■■■□□ 15.2
CHD4-207ENST00000537634 USP14P54578 494 aa11.73□□□□□ -0.53
CHD4-207ENST00000537634 CHRDL2Q6WN34 429 aa11.73□□□□□ -0.53
CHD4-207ENST00000537634 RPTORQ8N122 1335 aa11.73□□□□□ -0.53
CHD4-207ENST00000537634 C12orf42Q96LP6 360 aa11.73□□□□□ -0.53
CHD4-207ENST00000537634 CRISPLD2Q9H0B8 497 aa11.73□□□□□ -0.53
CHD4-207ENST00000537634 ZNF532Q9HCE3 1301 aa11.73□□□□□ -0.53
CHD4-207ENST00000537634 CWC22Q9HCG8 908 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms