RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 GDF11O95390 407 aa25.11■■□□□ 1.61
LPCAT3-204ENST00000536797 CETPP11597 493 aa25.11■■□□□ 1.61
LPCAT3-204ENST00000536797 CCL15Q16663 113 aa25.11■■□□□ 1.61
LPCAT3-204ENST00000536797 CERKLQ49MI3 558 aaPredicted RBP25.11■■□□□ 1.61
LPCAT3-204ENST00000536797 SBK1Q52WX2 424 aa25.11■■□□□ 1.61
LPCAT3-204ENST00000536797 IFNL1Q8IU54 200 aa25.11■■□□□ 1.61
LPCAT3-204ENST00000536797 IFNL3Q8IZI9 196 aa25.11■■□□□ 1.61
LPCAT3-204ENST00000536797 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.11■■□□□ 1.61
LPCAT3-204ENST00000536797 KCNH4Q9UQ05 1017 aa25.11■■□□□ 1.61
LPCAT3-204ENST00000536797 TRPA1O75762 1119 aa25.1■■□□□ 1.61
LPCAT3-204ENST00000536797 SHMT1P34896 483 aa25.1■■□□□ 1.61
LPCAT3-204ENST00000536797 CTCFP49711 727 aaPredicted RBP25.1■■□□□ 1.61
LPCAT3-204ENST00000536797 OTUD7BQ6GQQ9 843 aa25.1■■□□□ 1.61
LPCAT3-204ENST00000536797 TBC1D2Q9BYX2 928 aa25.1■■□□□ 1.61
LPCAT3-204ENST00000536797 CXCL11O14625 94 aa25.09■■□□□ 1.61
LPCAT3-204ENST00000536797 ALDH1A1P00352 501 aa25.09■■□□□ 1.61
LPCAT3-204ENST00000536797 BRI3BPQ8WY22 251 aa25.09■■□□□ 1.61
LPCAT3-204ENST00000536797 DYNLL2Q96FJ2 89 aa25.09■■□□□ 1.61
LPCAT3-204ENST00000536797 NAPBQ9H115 298 aa25.09■■□□□ 1.61
LPCAT3-204ENST00000536797 ZBTB21Q9ULJ3 1066 aa25.09■■□□□ 1.61
LPCAT3-204ENST00000536797 AFG3L2Q9Y4W6 797 aa25.09■■□□□ 1.61
LPCAT3-204ENST00000536797 USP17L5A8MUK1 530 aa25.08■■□□□ 1.61
LPCAT3-204ENST00000536797 IGF2BP3O00425 579 aaKnown RBP eCLIP25.08■■□□□ 1.61
LPCAT3-204ENST00000536797 MFAP1P55081 439 aaKnown RBP25.08■■□□□ 1.61
LPCAT3-204ENST00000536797 CWC27Q6UX04 472 aaKnown RBP25.08■■□□□ 1.61
LPCAT3-204ENST00000536797 CCDC84Q86UT8 332 aaPredicted RBP25.08■■□□□ 1.61
LPCAT3-204ENST00000536797 AS3MTQ9HBK9 375 aa25.08■■□□□ 1.61
LPCAT3-204ENST00000536797 TSKSQ9UJT2 592 aa25.08■■□□□ 1.61
LPCAT3-204ENST00000536797 CCDC171Q6TFL3 1326 aa25.07■■□□□ 1.6
LPCAT3-204ENST00000536797 MINDY4BA8MYZ0 360 aa25.07■■□□□ 1.6
LPCAT3-204ENST00000536797 ABCB5Q2M3G0 1257 aa25.07■■□□□ 1.6
LPCAT3-204ENST00000536797 C16orf86Q6ZW13 317 aa25.07■■□□□ 1.6
LPCAT3-204ENST00000536797 SLC44A5Q8NCS7 719 aa25.07■■□□□ 1.6
LPCAT3-204ENST00000536797 PTPN18Q99952 460 aa25.07■■□□□ 1.6
LPCAT3-204ENST00000536797 TRIM75PA6NK02 468 aa25.06■■□□□ 1.6
LPCAT3-204ENST00000536797 GH2P01242 217 aa25.06■■□□□ 1.6
LPCAT3-204ENST00000536797 HSPA8P11142 646 aaKnown RBP25.06■■□□□ 1.6
LPCAT3-204ENST00000536797 JAG1P78504 1218 aa25.06■■□□□ 1.6
LPCAT3-204ENST00000536797 ZNF589Q86UQ0 364 aaPredicted RBP25.06■■□□□ 1.6
LPCAT3-204ENST00000536797 SKAP1Q86WV1 359 aa25.06■■□□□ 1.6
LPCAT3-204ENST00000536797 ZNF280CQ8ND82 737 aa25.06■■□□□ 1.6
LPCAT3-204ENST00000536797 CABP5Q9NP86 173 aa25.06■■□□□ 1.6
LPCAT3-204ENST00000536797 PTPRFP10586 1907 aa25.06■■□□□ 1.6
LPCAT3-204ENST00000536797 SMIM22K7EJ46 135 aa25.05■■□□□ 1.6
LPCAT3-204ENST00000536797 CDK8P49336 464 aa25.05■■□□□ 1.6
LPCAT3-204ENST00000536797 SHROOM1Q2M3G4 852 aaPredicted RBP25.05■■□□□ 1.6
LPCAT3-204ENST00000536797 VPS53Q5VIR6 699 aa25.05■■□□□ 1.6
LPCAT3-204ENST00000536797 ROBO3Q96MS0 1386 aa25.05■■□□□ 1.6
LPCAT3-204ENST00000536797 FOXP2O15409 715 aa25.04■■□□□ 1.6
LPCAT3-204ENST00000536797 A0A0G2JLL6 359 aaPredicted RBP25.03■■□□□ 1.6
LPCAT3-204ENST00000536797 MPHOSPH10O00566 681 aaKnown RBP25.03■■□□□ 1.6
LPCAT3-204ENST00000536797 LBX1P52954 281 aa25.03■■□□□ 1.6
LPCAT3-204ENST00000536797 SPP2Q13103 211 aa25.03■■□□□ 1.6
LPCAT3-204ENST00000536797 FASTKD5Q7L8L6 764 aaKnown RBP25.03■■□□□ 1.6
LPCAT3-204ENST00000536797 PRRT2Q7Z6L0 340 aaPredicted RBP25.03■■□□□ 1.6
LPCAT3-204ENST00000536797 WDR18Q9BV38 432 aa25.03■■□□□ 1.6
LPCAT3-204ENST00000536797 BTBD19C9JJ37 291 aa25.03■■□□□ 1.6
LPCAT3-204ENST00000536797 HSPD1P10809 573 aaKnown RBP25.03■■□□□ 1.6
LPCAT3-204ENST00000536797 RAB3GAP1Q15042 981 aa25.03■■□□□ 1.6
LPCAT3-204ENST00000536797 TBC1D8O95759 1140 aa25.02■■□□□ 1.6
LPCAT3-204ENST00000536797 ALX1Q15699 326 aa25.02■■□□□ 1.6
LPCAT3-204ENST00000536797 STK11IPQ8N1F8 1099 aa25.02■■□□□ 1.6
LPCAT3-204ENST00000536797 FAM43AQ8N2R8 423 aa25.02■■□□□ 1.6
LPCAT3-204ENST00000536797 CCDC17Q96LX7 622 aa25.02■■□□□ 1.6
LPCAT3-204ENST00000536797 CFHR5Q9BXR6 569 aa25.02■■□□□ 1.6
LPCAT3-204ENST00000536797 ZNF287Q9HBT7 754 aa25.02■■□□□ 1.6
LPCAT3-204ENST00000536797 ZCCHC17Q9NP64 241 aaKnown RBP25.02■■□□□ 1.6
LPCAT3-204ENST00000536797 SLC3A2P08195 630 aaKnown RBP25.01■■□□□ 1.59
LPCAT3-204ENST00000536797 CHMLP26374 656 aa25.01■■□□□ 1.59
LPCAT3-204ENST00000536797 PPARAQ07869 468 aa25.01■■□□□ 1.59
LPCAT3-204ENST00000536797 GADL1Q6ZQY3 521 aa25.01■■□□□ 1.59
LPCAT3-204ENST00000536797 TMEM179Q6ZVK1 233 aa25.01■■□□□ 1.59
LPCAT3-204ENST00000536797 ANKRD23Q86SG2 305 aa25.01■■□□□ 1.59
LPCAT3-204ENST00000536797 RUFY2Q8WXA3 655 aa25.01■■□□□ 1.59
LPCAT3-204ENST00000536797 MKNK2Q9HBH9 465 aa25.01■■□□□ 1.59
LPCAT3-204ENST00000536797 RAD50Q92878 1312 aa25■■□□□ 1.59
LPCAT3-204ENST00000536797 MOGSQ13724 837 aa25■■□□□ 1.59
LPCAT3-204ENST00000536797 BMP2KLQ5H9B9 411 aa25■■□□□ 1.59
LPCAT3-204ENST00000536797 PRDM10Q9NQV6 1147 aa25■■□□□ 1.59
LPCAT3-204ENST00000536797 ZMYM6O95789 1325 aa24.99■■□□□ 1.59
LPCAT3-204ENST00000536797 USP17L10C9JJH3 530 aa24.99■■□□□ 1.59
LPCAT3-204ENST00000536797 FGAP02671 866 aa24.99■■□□□ 1.59
LPCAT3-204ENST00000536797 AKR1B1P15121 316 aa24.99■■□□□ 1.59
LPCAT3-204ENST00000536797 MTMR2Q13614 643 aa24.99■■□□□ 1.59
LPCAT3-204ENST00000536797 SEPT2Q15019 361 aa24.99■■□□□ 1.59
LPCAT3-204ENST00000536797 TAF1CQ15572 869 aaPredicted RBP24.99■■□□□ 1.59
LPCAT3-204ENST00000536797 LOC285556D6RIA3 1793 aa24.98■■□□□ 1.59
LPCAT3-204ENST00000536797 GUCY1A2P33402 732 aa24.98■■□□□ 1.59
LPCAT3-204ENST00000536797 HMGCS2P54868 508 aa24.98■■□□□ 1.59
LPCAT3-204ENST00000536797 BACE1P56817 501 aa24.98■■□□□ 1.59
LPCAT3-204ENST00000536797 PDE4BQ07343 736 aa24.98■■□□□ 1.59
LPCAT3-204ENST00000536797 PROCA1Q8NCQ7 364 aaPredicted RBP24.98■■□□□ 1.59
LPCAT3-204ENST00000536797 C19orf81C9J6K1 198 aa24.97■■□□□ 1.59
LPCAT3-204ENST00000536797 PDHXO00330 501 aa24.97■■□□□ 1.59
LPCAT3-204ENST00000536797 CRHR2Q13324 411 aa24.97■■□□□ 1.59
LPCAT3-204ENST00000536797 SH3D19Q5HYK7 790 aa24.97■■□□□ 1.59
LPCAT3-204ENST00000536797 ZFYVE28Q9HCC9 887 aa24.97■■□□□ 1.59
LPCAT3-204ENST00000536797 GPAT2Q6NUI2 795 aa24.96■■□□□ 1.59
LPCAT3-204ENST00000536797 ZNF444Q8N0Y2 327 aaPredicted RBP24.96■■□□□ 1.59
LPCAT3-204ENST00000536797 FEZ1Q99689 392 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms