RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 INHAP05111 366 aa24.01■■□□□ 1.43
TNFRSF1B-204ENST00000536782 BACE1P56817 501 aa24.01■■□□□ 1.43
TNFRSF1B-204ENST00000536782 CERS3Q8IU89 383 aa24.01■■□□□ 1.43
TNFRSF1B-204ENST00000536782 DPF3Q92784 378 aa24.01■■□□□ 1.43
TNFRSF1B-204ENST00000536782 TMOD4Q9NZQ9 345 aa24.01■■□□□ 1.43
TNFRSF1B-204ENST00000536782 SAP30BPQ9UHR5 308 aaKnown RBP24.01■■□□□ 1.43
TNFRSF1B-204ENST00000536782 ZBED9Q6R2W3 1325 aa24.01■■□□□ 1.43
TNFRSF1B-204ENST00000536782 SGPL1O95470 568 aa24■■□□□ 1.43
TNFRSF1B-204ENST00000536782 JAG1P78504 1218 aa24■■□□□ 1.43
TNFRSF1B-204ENST00000536782 PANK1Q8TE04 598 aa24■■□□□ 1.43
TNFRSF1B-204ENST00000536782 EXOC6BQ9Y2D4 811 aa24■■□□□ 1.43
TNFRSF1B-204ENST00000536782 ALPK3Q96L96 1907 aa24■■□□□ 1.43
TNFRSF1B-204ENST00000536782 C19orf81C9J6K1 198 aa23.99■■□□□ 1.43
TNFRSF1B-204ENST00000536782 GDF11O95390 407 aa23.99■■□□□ 1.43
TNFRSF1B-204ENST00000536782 IRX3P78415 501 aaPredicted RBP23.99■■□□□ 1.43
TNFRSF1B-204ENST00000536782 AACSQ86V21 672 aa23.99■■□□□ 1.43
TNFRSF1B-204ENST00000536782 MAGEB6Q8N7X4 407 aa23.99■■□□□ 1.43
TNFRSF1B-204ENST00000536782 MIGA1Q8NAN2 632 aa23.99■■□□□ 1.43
TNFRSF1B-204ENST00000536782 HTATIP2Q9BUP3 242 aa23.99■■□□□ 1.43
TNFRSF1B-204ENST00000536782 PLXNB2O15031 1838 aa23.98■■□□□ 1.43
TNFRSF1B-204ENST00000536782 USP17L10C9JJH3 530 aa23.98■■□□□ 1.43
TNFRSF1B-204ENST00000536782 CAPN2P17655 700 aa23.98■■□□□ 1.43
TNFRSF1B-204ENST00000536782 MAP3K12Q12852 859 aa23.98■■□□□ 1.43
TNFRSF1B-204ENST00000536782 HSP90AB4PQ58FF6 505 aa23.98■■□□□ 1.43
TNFRSF1B-204ENST00000536782 ZBTB21Q9ULJ3 1066 aa23.98■■□□□ 1.43
TNFRSF1B-204ENST00000536782 NDUFB9Q9Y6M9 179 aa23.98■■□□□ 1.43
TNFRSF1B-204ENST00000536782 FARP2O94887 1054 aaPredicted RBP23.97■■□□□ 1.43
TNFRSF1B-204ENST00000536782 MS4A1P11836 297 aa23.97■■□□□ 1.43
TNFRSF1B-204ENST00000536782 HOXA7P31268 230 aaPredicted RBP23.97■■□□□ 1.43
TNFRSF1B-204ENST00000536782 USP5P45974 858 aa23.97■■□□□ 1.43
TNFRSF1B-204ENST00000536782 TMED8Q6PL24 325 aaPredicted RBP23.97■■□□□ 1.43
TNFRSF1B-204ENST00000536782 ANTXR1Q9H6X2 564 aa23.97■■□□□ 1.43
TNFRSF1B-204ENST00000536782 SHROOM1Q2M3G4 852 aaPredicted RBP23.96■■□□□ 1.43
TNFRSF1B-204ENST00000536782 DEFB118Q96PH6 123 aa23.96■■□□□ 1.43
TNFRSF1B-204ENST00000536782 MORF4L1Q9UBU8 362 aa23.96■■□□□ 1.43
TNFRSF1B-204ENST00000536782 TFRCP02786 760 aaKnown RBP23.95■■□□□ 1.42
TNFRSF1B-204ENST00000536782 P2RX7Q99572 595 aaKnown RBP23.95■■□□□ 1.42
TNFRSF1B-204ENST00000536782 PAK6Q9NQU5 681 aaPredicted RBP23.95■■□□□ 1.42
TNFRSF1B-204ENST00000536782 RHPN1Q8TCX5 695 aa23.94■■□□□ 1.42
TNFRSF1B-204ENST00000536782 IL1RAPL2Q9NP60 686 aa23.94■■□□□ 1.42
TNFRSF1B-204ENST00000536782 GJD2Q9UKL4 321 aa23.94■■□□□ 1.42
TNFRSF1B-204ENST00000536782 GH2P01242 217 aa23.93■■□□□ 1.42
TNFRSF1B-204ENST00000536782 HMGCRP04035 888 aa23.93■■□□□ 1.42
TNFRSF1B-204ENST00000536782 HERVK_113P62684 666 aa23.93■■□□□ 1.42
TNFRSF1B-204ENST00000536782 TATDN1Q6P1N9 297 aa23.93■■□□□ 1.42
TNFRSF1B-204ENST00000536782 TTC6Q86TZ1 520 aa23.93■■□□□ 1.42
TNFRSF1B-204ENST00000536782 EHD4Q9H223 541 aa23.93■■□□□ 1.42
TNFRSF1B-204ENST00000536782 SERPINB13Q9UIV8 391 aa23.93■■□□□ 1.42
TNFRSF1B-204ENST00000536782 MYH1P12882 1939 aa23.92■■□□□ 1.42
TNFRSF1B-204ENST00000536782 TTF1Q15361 905 aaPredicted RBP23.92■■□□□ 1.42
TNFRSF1B-204ENST00000536782 USP17L2Q6R6M4 530 aa23.92■■□□□ 1.42
TNFRSF1B-204ENST00000536782 GPRC5AQ8NFJ5 357 aa23.92■■□□□ 1.42
TNFRSF1B-204ENST00000536782 EMILIN3Q9NT22 766 aa23.92■■□□□ 1.42
TNFRSF1B-204ENST00000536782 NR2E3Q9Y5X4 410 aa23.92■■□□□ 1.42
TNFRSF1B-204ENST00000536782 CHRDL2Q6WN34 429 aa23.91■■□□□ 1.42
TNFRSF1B-204ENST00000536782 RPAP2Q8IXW5 612 aaPredicted RBP23.91■■□□□ 1.42
TNFRSF1B-204ENST00000536782 CLASRPQ8N2M8 674 aaKnown RBP23.91■■□□□ 1.42
TNFRSF1B-204ENST00000536782 CRISPLD2Q9H0B8 497 aa23.91■■□□□ 1.42
TNFRSF1B-204ENST00000536782 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.91■■□□□ 1.42
TNFRSF1B-204ENST00000536782 TXNRD2Q9NNW7 524 aa23.91■■□□□ 1.42
TNFRSF1B-204ENST00000536782 HMMRO75330 724 aa23.9■■□□□ 1.42
TNFRSF1B-204ENST00000536782 GTF3C2Q8WUA4 911 aaPredicted RBP23.9■■□□□ 1.42
TNFRSF1B-204ENST00000536782 KIF1BPQ96EK5 621 aa23.9■■□□□ 1.42
TNFRSF1B-204ENST00000536782 RIOK1Q9BRS2 568 aaKnown RBP23.9■■□□□ 1.42
TNFRSF1B-204ENST00000536782 RBPJLQ9UBG7 517 aa23.9■■□□□ 1.42
TNFRSF1B-204ENST00000536782 LAMA3Q16787 3333 aa23.9■■□□□ 1.42
TNFRSF1B-204ENST00000536782 MAGEB6P1A0A0J9YX57 407 aa23.89■■□□□ 1.41
TNFRSF1B-204ENST00000536782 APBB1O00213 710 aa23.89■■□□□ 1.41
TNFRSF1B-204ENST00000536782 PEX10O60683 326 aa23.89■■□□□ 1.41
TNFRSF1B-204ENST00000536782 CERKLQ49MI3 558 aaPredicted RBP23.89■■□□□ 1.41
TNFRSF1B-204ENST00000536782 FEZ1Q99689 392 aa23.89■■□□□ 1.41
TNFRSF1B-204ENST00000536782 PRO3102Q9H379 93 aa23.89■■□□□ 1.41
TNFRSF1B-204ENST00000536782 DDX19BQ9UMR2 479 aa23.89■■□□□ 1.41
TNFRSF1B-204ENST00000536782 RPTORQ8N122 1335 aa23.88■■□□□ 1.41
TNFRSF1B-204ENST00000536782 IFIT2P09913 472 aaKnown RBP23.88■■□□□ 1.41
TNFRSF1B-204ENST00000536782 CYP2B6P20813 491 aa23.88■■□□□ 1.41
TNFRSF1B-204ENST00000536782 MAPK4P31152 587 aa23.88■■□□□ 1.41
TNFRSF1B-204ENST00000536782 RAB3GAP1Q15042 981 aa23.88■■□□□ 1.41
TNFRSF1B-204ENST00000536782 SLC9C2Q5TAH2 1124 aa23.88■■□□□ 1.41
TNFRSF1B-204ENST00000536782 CCAR1Q8IX12 1150 aaKnown RBP23.88■■□□□ 1.41
TNFRSF1B-204ENST00000536782 SOCS4Q8WXH5 440 aa23.88■■□□□ 1.41
TNFRSF1B-204ENST00000536782 NUDT12Q9BQG2 462 aa23.88■■□□□ 1.41
TNFRSF1B-204ENST00000536782 HMX1Q9NP08 348 aaPredicted RBP23.88■■□□□ 1.41
TNFRSF1B-204ENST00000536782 RBM27Q9P2N5 1060 aaKnown RBP23.88■■□□□ 1.41
TNFRSF1B-204ENST00000536782 POLR3DP05423 398 aaPredicted RBP23.87■■□□□ 1.41
TNFRSF1B-204ENST00000536782 PDE6AP16499 860 aa23.87■■□□□ 1.41
TNFRSF1B-204ENST00000536782 USP14P54578 494 aa23.87■■□□□ 1.41
TNFRSF1B-204ENST00000536782 ERVK-9P63128 1117 aa23.87■■□□□ 1.41
TNFRSF1B-204ENST00000536782 ERVK-24P63145 666 aa23.87■■□□□ 1.41
TNFRSF1B-204ENST00000536782 PDE3AQ14432 1141 aa23.87■■□□□ 1.41
TNFRSF1B-204ENST00000536782 ZYXQ15942 572 aaKnown RBP23.87■■□□□ 1.41
TNFRSF1B-204ENST00000536782 ABCB5Q2M3G0 1257 aa23.87■■□□□ 1.41
TNFRSF1B-204ENST00000536782 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.87■■□□□ 1.41
TNFRSF1B-204ENST00000536782 TRIB2Q92519 343 aa23.87■■□□□ 1.41
TNFRSF1B-204ENST00000536782 C12orf42Q96LP6 360 aa23.87■■□□□ 1.41
TNFRSF1B-204ENST00000536782 PAGR1Q9BTK6 254 aa23.87■■□□□ 1.41
TNFRSF1B-204ENST00000536782 CRNKL1Q9BZJ0 848 aaKnown RBP23.87■■□□□ 1.41
TNFRSF1B-204ENST00000536782 CABP5Q9NP86 173 aa23.87■■□□□ 1.41
TNFRSF1B-204ENST00000536782 ZBTB40Q9NUA8 1239 aa23.87■■□□□ 1.41
TNFRSF1B-204ENST00000536782 COG6Q9Y2V7 657 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms