RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 KBTBD4Q9NVX7 518 aa9.03□□□□□ -0.96
CLIP1-207ENST00000536634 PIM2Q9P1W9 311 aa9.03□□□□□ -0.96
CLIP1-207ENST00000536634 SNCAIPQ9Y6H5 919 aa9.03□□□□□ -0.96
CLIP1-207ENST00000536634 LEFTY1O75610 366 aa9.02□□□□□ -0.97
CLIP1-207ENST00000536634 FAM87AP0C7U9 286 aa9.02□□□□□ -0.97
CLIP1-207ENST00000536634 FAM160A1Q05DH4 1040 aa9.02□□□□□ -0.97
CLIP1-207ENST00000536634 CAMK2GQ13555 558 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-207ENST00000536634 GIMAP7Q8NHV1 300 aa9.02□□□□□ -0.97
CLIP1-207ENST00000536634 FBRSQ9HAH7 460 aa9.02□□□□□ -0.97
CLIP1-207ENST00000536634 LEMD3Q9Y2U8 911 aa9.02□□□□□ -0.97
CLIP1-207ENST00000536634 MINDY4BA8MYZ0 360 aa9.01□□□□□ -0.97
CLIP1-207ENST00000536634 COBLO75128 1261 aa9.01□□□□□ -0.97
CLIP1-207ENST00000536634 LMNB2Q03252 620 aa9.01□□□□□ -0.97
CLIP1-207ENST00000536634 TSNAXIP1Q2TAA8 658 aa9.01□□□□□ -0.97
CLIP1-207ENST00000536634 OGFOD3Q6PK18 319 aa9.01□□□□□ -0.97
CLIP1-207ENST00000536634 RELL1Q8IUW5 271 aa9.01□□□□□ -0.97
CLIP1-207ENST00000536634 METTL22Q9BUU2 404 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-207ENST00000536634 BACH2Q9BYV9 841 aa9.01□□□□□ -0.97
CLIP1-207ENST00000536634 BCL11AQ9H165 835 aa9.01□□□□□ -0.97
CLIP1-207ENST00000536634 COL17A1Q9UMD9 1497 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-207ENST00000536634 TMEM87AQ8NBN3 555 aa9□□□□□ -0.97
CLIP1-207ENST00000536634 WNT10AQ9GZT5 417 aa9□□□□□ -0.97
CLIP1-207ENST00000536634 ZFP64Q9NPA5 681 aa9□□□□□ -0.97
CLIP1-207ENST00000536634 KRTAP4-8A0A0G2JLE6 195 aa8.99□□□□□ -0.97
CLIP1-207ENST00000536634 FAM221AA4D161 298 aa8.99□□□□□ -0.97
CLIP1-207ENST00000536634 F13A1P00488 732 aa8.99□□□□□ -0.97
CLIP1-207ENST00000536634 FOSL1P15407 271 aa8.99□□□□□ -0.97
CLIP1-207ENST00000536634 GARTP22102 1010 aa8.99□□□□□ -0.97
CLIP1-207ENST00000536634 GRK4P32298 578 aa8.99□□□□□ -0.97
CLIP1-207ENST00000536634 RPL6Q02878 288 aaKnown RBP8.99□□□□□ -0.97
CLIP1-207ENST00000536634 CPSF6Q16630 551 aaKnown RBP eCLIP8.99□□□□□ -0.97
CLIP1-207ENST00000536634 DUSP27Q5VZP5 1158 aa8.99□□□□□ -0.97
CLIP1-207ENST00000536634 TOP6BLQ8N6T0 577 aa8.99□□□□□ -0.97
CLIP1-207ENST00000536634 ZNF507Q8TCN5 953 aa8.99□□□□□ -0.97
CLIP1-207ENST00000536634 DUSP23Q9BVJ7 150 aa8.99□□□□□ -0.97
CLIP1-207ENST00000536634 LRRC4CQ9HCJ2 640 aa8.99□□□□□ -0.97
CLIP1-207ENST00000536634 GGT7Q9UJ14 662 aa8.99□□□□□ -0.97
CLIP1-207ENST00000536634 KIAA1324LA8MWY0 1029 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-207ENST00000536634 RECKO95980 971 aa8.98□□□□□ -0.97
CLIP1-207ENST00000536634 SPINK2P20155 84 aa8.98□□□□□ -0.97
CLIP1-207ENST00000536634 GRIK1P39086 918 aa8.98□□□□□ -0.97
CLIP1-207ENST00000536634 ETF1P62495 437 aaKnown RBP8.98□□□□□ -0.97
CLIP1-207ENST00000536634 CYP27A1Q02318 531 aa8.98□□□□□ -0.97
CLIP1-207ENST00000536634 PWP1Q13610 501 aa8.98□□□□□ -0.97
CLIP1-207ENST00000536634 NKG7Q16617 165 aa8.98□□□□□ -0.97
CLIP1-207ENST00000536634 CDC37L1Q7L3B6 337 aa8.98□□□□□ -0.97
CLIP1-207ENST00000536634 ARMCX6Q7L4S7 300 aa8.98□□□□□ -0.97
CLIP1-207ENST00000536634 CCDC84Q86UT8 332 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-207ENST00000536634 U3KQE9 123 aa8.98□□□□□ -0.97
CLIP1-207ENST00000536634 GLI2P10070 1586 aa8.98□□□□□ -0.97
CLIP1-207ENST00000536634 KIAA0586Q9BVV6 1533 aa8.97□□□□□ -0.97
CLIP1-207ENST00000536634 UNCXA6NJT0 531 aa8.97□□□□□ -0.97
CLIP1-207ENST00000536634 CYP26A1O43174 497 aa8.97□□□□□ -0.97
CLIP1-207ENST00000536634 CILPO75339 1184 aa8.97□□□□□ -0.97
CLIP1-207ENST00000536634 SLBPQ14493 270 aaKnown RBP eCLIP8.97□□□□□ -0.97
CLIP1-207ENST00000536634 SNAP47Q5SQN1 464 aa8.97□□□□□ -0.97
CLIP1-207ENST00000536634 INTS5Q6P9B9 1019 aaKnown RBP8.97□□□□□ -0.97
CLIP1-207ENST00000536634 HS2ST1Q7LGA3 356 aa8.97□□□□□ -0.97
CLIP1-207ENST00000536634 GOLM1Q8NBJ4 401 aa8.97□□□□□ -0.97
CLIP1-207ENST00000536634 GATAD2BQ8WXI9 593 aa8.97□□□□□ -0.97
CLIP1-207ENST00000536634 PCMTD2Q9NV79 361 aa8.97□□□□□ -0.97
CLIP1-207ENST00000536634 CUL7Q14999 1698 aa8.97□□□□□ -0.97
CLIP1-207ENST00000536634 ASXL2Q76L83 1435 aa8.97□□□□□ -0.97
CLIP1-207ENST00000536634 ABCC2Q92887 1545 aa8.96□□□□□ -0.97
CLIP1-207ENST00000536634 MSMPQ1L6U9 139 aa8.96□□□□□ -0.98
CLIP1-207ENST00000536634 FBXO27Q8NI29 283 aa8.96□□□□□ -0.98
CLIP1-207ENST00000536634 CCDC9Q9Y3X0 531 aaKnown RBP8.96□□□□□ -0.98
CLIP1-207ENST00000536634 ADAMTS4O75173 837 aa8.95□□□□□ -0.98
CLIP1-207ENST00000536634 FANCCQ00597 558 aa8.95□□□□□ -0.98
CLIP1-207ENST00000536634 CYP27C1Q4G0S4 372 aa8.95□□□□□ -0.98
CLIP1-207ENST00000536634 FBXL19Q6PCT2 694 aa8.95□□□□□ -0.98
CLIP1-207ENST00000536634 DTX1Q86Y01 620 aa8.95□□□□□ -0.98
CLIP1-207ENST00000536634 FAM181AQ8N9Y4 354 aa8.95□□□□□ -0.98
CLIP1-207ENST00000536634 KCT2Q8NC54 265 aa8.95□□□□□ -0.98
CLIP1-207ENST00000536634 PRDM10Q9NQV6 1147 aa8.95□□□□□ -0.98
CLIP1-207ENST00000536634 CORINQ9Y5Q5 1042 aa8.95□□□□□ -0.98
CLIP1-207ENST00000536634 TACC3Q9Y6A5 838 aa8.95□□□□□ -0.98
CLIP1-207ENST00000536634 PTPRGP23470 1445 aa8.95□□□□□ -0.98
CLIP1-207ENST00000536634 MAP3K4Q9Y6R4 1608 aa8.94□□□□□ -0.98
CLIP1-207ENST00000536634 LRIG2O94898 1065 aa8.94□□□□□ -0.98
CLIP1-207ENST00000536634 FAM214BQ7L5A3 538 aa8.94□□□□□ -0.98
CLIP1-207ENST00000536634 HID1Q8IV36 788 aa8.94□□□□□ -0.98
CLIP1-207ENST00000536634 MRRFQ96E11 262 aaKnown RBP8.94□□□□□ -0.98
CLIP1-207ENST00000536634 KCNQ5Q9NR82 932 aa8.94□□□□□ -0.98
CLIP1-207ENST00000536634 KIAA1522Q9P206 1035 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-207ENST00000536634 TJP2Q9UDY2 1190 aa8.94□□□□□ -0.98
CLIP1-207ENST00000536634 ZC3H7BQ9UGR2 993 aaKnown RBP8.94□□□□□ -0.98
CLIP1-207ENST00000536634 ADAMTS1Q9UHI8 967 aa8.94□□□□□ -0.98
CLIP1-207ENST00000536634 TTBK1Q5TCY1 1321 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-207ENST00000536634 PLB1Q6P1J6 1458 aa8.94□□□□□ -0.98
CLIP1-207ENST00000536634 BPNT1O95861 308 aa8.93□□□□□ -0.98
CLIP1-207ENST00000536634 PGRP06401 933 aa8.93□□□□□ -0.98
CLIP1-207ENST00000536634 VAMP1P23763 118 aa8.93□□□□□ -0.98
CLIP1-207ENST00000536634 ZNF76P36508 570 aa8.93□□□□□ -0.98
CLIP1-207ENST00000536634 EIF4A3P38919 411 aaKnown RBP8.93□□□□□ -0.98
CLIP1-207ENST00000536634 CAP2P40123 477 aa8.93□□□□□ -0.98
CLIP1-207ENST00000536634 FAM196AQ6ZSG2 479 aa8.93□□□□□ -0.98
CLIP1-207ENST00000536634 HEXIM2Q96MH2 286 aaKnown RBP8.93□□□□□ -0.98
CLIP1-207ENST00000536634 FOXQ1Q9C009 403 aa8.93□□□□□ -0.98
CLIP1-207ENST00000536634 POLR3KQ9Y2Y1 108 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms