RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 ILDR1Q86SU0 546 aaPredicted RBP9.48□□□□□ -0.89
ABCA4-207ENST00000536513 RASGRP4Q8TDF6 673 aa9.48□□□□□ -0.89
ABCA4-207ENST00000536513 PLSCR1O15162 318 aa9.48□□□□□ -0.89
ABCA4-207ENST00000536513 GUCY1A2P33402 732 aa9.48□□□□□ -0.89
ABCA4-207ENST00000536513 SLC16A2P36021 539 aa9.48□□□□□ -0.89
ABCA4-207ENST00000536513 ZNF654Q8IZM8 581 aa9.48□□□□□ -0.89
ABCA4-207ENST00000536513 TMOD2Q9NZR1 351 aa9.48□□□□□ -0.89
ABCA4-207ENST00000536513 CLIP2Q9UDT6 1046 aa9.48□□□□□ -0.89
ABCA4-207ENST00000536513 PLEKHA8P1O95397 391 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 BRD1O95696 1058 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 NLRP5P59047 1200 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 ST3GAL1Q11201 340 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 TPD52L1Q16890 204 aaPredicted RBP9.47□□□□□ -0.89
ABCA4-207ENST00000536513 CNKSR1Q969H4 720 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 TEKT1Q969V4 418 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 TM6SF1Q9BZW5 370 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.47□□□□□ -0.89
ABCA4-207ENST00000536513 ATP6V0A2Q9Y487 856 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 GLI3P10071 1580 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 A0A1B0GVL5 298 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 FOXP2O15409 715 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 NRDCO43847 1150 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 LETM1O95202 739 aaPredicted RBP9.47□□□□□ -0.89
ABCA4-207ENST00000536513 GNAT2P19087 354 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 GSTO1P78417 241 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 NR5A1Q13285 461 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 NOLC1Q14978 699 aaKnown RBP eCLIP9.47□□□□□ -0.89
ABCA4-207ENST00000536513 USP17L2Q6R6M4 530 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 NSUN7Q8NE18 718 aaKnown RBP9.47□□□□□ -0.89
ABCA4-207ENST00000536513 ZNF384Q8TF68 577 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 ATRNO75882 1429 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 BTBD18B2RXH4 712 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 SHROOM1Q2M3G4 852 aaPredicted RBP9.47□□□□□ -0.89
ABCA4-207ENST00000536513 TBC1D10BQ4KMP7 808 aaPredicted RBP9.47□□□□□ -0.89
ABCA4-207ENST00000536513 CABP5Q9NP86 173 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 DACT1Q9NYF0 836 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 ARFGEF2Q9Y6D5 1785 aa9.47□□□□□ -0.89
ABCA4-207ENST00000536513 U2AF2P26368 475 aaKnown RBP eCLIP9.46□□□□□ -0.89
ABCA4-207ENST00000536513 FAM193AP78312 1265 aa9.46□□□□□ -0.89
ABCA4-207ENST00000536513 CCDC73Q6ZRK6 1079 aa9.46□□□□□ -0.89
ABCA4-207ENST00000536513 TEX2Q8IWB9 1127 aa9.46□□□□□ -0.89
ABCA4-207ENST00000536513 GPT2Q8TD30 523 aa9.46□□□□□ -0.89
ABCA4-207ENST00000536513 GTPBP4Q9BZE4 634 aaKnown RBP9.46□□□□□ -0.89
ABCA4-207ENST00000536513 CNNM2Q9H8M5 875 aa9.46□□□□□ -0.89
ABCA4-207ENST00000536513 LMBRD1Q9NUN5 540 aa9.46□□□□□ -0.89
ABCA4-207ENST00000536513 TCRBV5S4A2TA0A5A2 114 aa9.46□□□□□ -0.89
ABCA4-207ENST00000536513 GRM1Q13255 1194 aa9.46□□□□□ -0.89
ABCA4-207ENST00000536513 CCAR2Q8N163 923 aaKnown RBP9.46□□□□□ -0.89
ABCA4-207ENST00000536513 CCDC112Q8NEF3 446 aa9.46□□□□□ -0.89
ABCA4-207ENST00000536513 STAMQ92783 540 aa9.46□□□□□ -0.89
ABCA4-207ENST00000536513 PGBD1Q96JS3 809 aa9.46□□□□□ -0.89
ABCA4-207ENST00000536513 ZNF408Q9H9D4 720 aa9.46□□□□□ -0.89
ABCA4-207ENST00000536513 TMEM63CQ9P1W3 806 aa9.46□□□□□ -0.89
ABCA4-207ENST00000536513 PKD1L3Q7Z443 1732 aa9.46□□□□□ -0.9
ABCA4-207ENST00000536513 ZFPM1Q8IX07 1006 aa9.46□□□□□ -0.9
ABCA4-207ENST00000536513 INTS4Q96HW7 963 aaKnown RBP9.46□□□□□ -0.9
ABCA4-207ENST00000536513 USP28Q96RU2 1077 aa9.46□□□□□ -0.9
ABCA4-207ENST00000536513 ZSCAN10Q96SZ4 725 aaPredicted RBP9.46□□□□□ -0.9
ABCA4-207ENST00000536513 PRDM16Q9HAZ2 1276 aa9.46□□□□□ -0.9
ABCA4-207ENST00000536513 MRVI1Q9Y6F6 885 aa9.46□□□□□ -0.9
ABCA4-207ENST00000536513 ABCA3Q99758 1704 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 SHTN1A0MZ66 631 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 CUL4AQ13619 759 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 KRT40Q6A162 431 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 TTC6Q86TZ1 520 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 NIM1KQ8IY84 436 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 MB21D2Q8IYB1 491 aaPredicted RBP9.45□□□□□ -0.9
ABCA4-207ENST00000536513 FEZ1Q99689 392 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 TRIM5Q9C035 493 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 NBPF3Q9H094 633 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 TNMDQ9H2S6 317 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 DAGLAQ9Y4D2 1042 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.45□□□□□ -0.9
ABCA4-207ENST00000536513 HLA-DOAP06340 250 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 RASSF7Q02833 373 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 TTLL12Q14166 644 aaPredicted RBP9.45□□□□□ -0.9
ABCA4-207ENST00000536513 TAF3Q5VWG9 929 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 KCTD1Q719H9 257 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 SP8Q8IXZ3 490 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 CERS5Q8N5B7 392 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 ENAHQ8N8S7 591 aaPredicted RBP9.45□□□□□ -0.9
ABCA4-207ENST00000536513 FSIP1Q8NA03 581 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 FANCBQ8NB91 859 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 AKT1S1Q96B36 256 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 C16orf45Q96MC5 204 aaPredicted RBP9.45□□□□□ -0.9
ABCA4-207ENST00000536513 ADCY5O95622 1261 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 LIG1P18858 919 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 CDC25AP30304 524 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 DLGAP5Q15398 846 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 ZNF174Q15697 407 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 PNMA1Q8ND90 353 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 TDRD7Q8NHU6 1098 aaKnown RBP9.45□□□□□ -0.9
ABCA4-207ENST00000536513 CAMKK2Q96RR4 588 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 RIOK1Q9BRS2 568 aaKnown RBP9.45□□□□□ -0.9
ABCA4-207ENST00000536513 TACC3Q9Y6A5 838 aa9.45□□□□□ -0.9
ABCA4-207ENST00000536513 ABCC6O95255 1503 aa9.44□□□□□ -0.9
ABCA4-207ENST00000536513 CDKL5O76039 1030 aa9.44□□□□□ -0.9
ABCA4-207ENST00000536513 CRKP46108 304 aa9.44□□□□□ -0.9
ABCA4-207ENST00000536513 USH1GQ495M9 461 aa9.44□□□□□ -0.9
ABCA4-207ENST00000536513 SAMD7Q7Z3H4 446 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms