RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 FAM53CQ9NYF3 392 aa6.29□□□□□ -1.4
YBX3-205ENST00000536107 WWC3Q9ULE0 1092 aa6.29□□□□□ -1.4
YBX3-205ENST00000536107 KANK1Q14678 1352 aa6.29□□□□□ -1.4
YBX3-205ENST00000536107 NPHP3Q7Z494 1330 aa6.28□□□□□ -1.4
YBX3-205ENST00000536107 ARHGAP31Q2M1Z3 1444 aa6.28□□□□□ -1.4
YBX3-205ENST00000536107 TSPAN15O95858 294 aa6.28□□□□□ -1.4
YBX3-205ENST00000536107 ADH5P11766 374 aa6.28□□□□□ -1.4
YBX3-205ENST00000536107 BNIP3Q12983 259 aa6.28□□□□□ -1.4
YBX3-205ENST00000536107 FAM200AQ8TCP9 573 aa6.28□□□□□ -1.4
YBX3-205ENST00000536107 PPP1R12CQ9BZL4 782 aa6.28□□□□□ -1.4
YBX3-205ENST00000536107 SEMA6CQ9H3T2 930 aa6.28□□□□□ -1.4
YBX3-205ENST00000536107 TMEM63CQ9P1W3 806 aa6.28□□□□□ -1.4
YBX3-205ENST00000536107 CNTN3Q9P232 1028 aa6.28□□□□□ -1.4
YBX3-205ENST00000536107 ADAMTS6Q9UKP5 1117 aa6.28□□□□□ -1.4
YBX3-205ENST00000536107 ACTL7BQ9Y614 415 aa6.28□□□□□ -1.4
YBX3-205ENST00000536107 CFAP65Q6ZU64 1925 aaKnown RBP6.28□□□□□ -1.4
YBX3-205ENST00000536107 C1orf167Q5SNV9 1468 aa6.28□□□□□ -1.4
YBX3-205ENST00000536107 SPHKAPQ2M3C7 1700 aa6.28□□□□□ -1.4
YBX3-205ENST00000536107 CASKIN1Q8WXD9 1431 aa6.27□□□□□ -1.41
YBX3-205ENST00000536107 SLIT2O94813 1529 aa6.27□□□□□ -1.41
YBX3-205ENST00000536107 LRRC10BA6NIK2 292 aa6.27□□□□□ -1.41
YBX3-205ENST00000536107 EIF4EBP3O60516 100 aaPredicted RBP6.27□□□□□ -1.41
YBX3-205ENST00000536107 CD8BP10966 210 aa6.27□□□□□ -1.41
YBX3-205ENST00000536107 OGFOD3Q6PK18 319 aa6.27□□□□□ -1.41
YBX3-205ENST00000536107 TTLL10Q6ZVT0 673 aa6.27□□□□□ -1.41
YBX3-205ENST00000536107 LRRN4CLQ8ND94 238 aa6.27□□□□□ -1.41
YBX3-205ENST00000536107 HHIPQ96QV1 700 aa6.27□□□□□ -1.41
YBX3-205ENST00000536107 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.27□□□□□ -1.41
YBX3-205ENST00000536107 CHD2O14647 1828 aaKnown RBP6.27□□□□□ -1.41
YBX3-205ENST00000536107 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.26□□□□□ -1.41
YBX3-205ENST00000536107 TRPA1O75762 1119 aa6.26□□□□□ -1.41
YBX3-205ENST00000536107 SEZ6L2Q6UXD5 910 aa6.26□□□□□ -1.41
YBX3-205ENST00000536107 LRRC56Q8IYG6 542 aaPredicted RBP6.26□□□□□ -1.41
YBX3-205ENST00000536107 PI4K2BQ8TCG2 481 aa6.26□□□□□ -1.41
YBX3-205ENST00000536107 NXPE3Q969Y0 559 aa6.26□□□□□ -1.41
YBX3-205ENST00000536107 PPP1R16BQ96T49 567 aa6.26□□□□□ -1.41
YBX3-205ENST00000536107 ACSS3Q9H6R3 686 aa6.26□□□□□ -1.41
YBX3-205ENST00000536107 C1GALT1Q9NS00 363 aa6.26□□□□□ -1.41
YBX3-205ENST00000536107 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.26□□□□□ -1.41
YBX3-205ENST00000536107 BRWD3Q6RI45 1802 aa6.26□□□□□ -1.41
YBX3-205ENST00000536107 ADAMTS13Q76LX8 1427 aa6.25□□□□□ -1.41
YBX3-205ENST00000536107 PTPRUQ92729 1446 aa6.25□□□□□ -1.41
YBX3-205ENST00000536107 ADGRB3O60242 1522 aa6.25□□□□□ -1.41
YBX3-205ENST00000536107 RAB6AP20340 208 aa6.25□□□□□ -1.41
YBX3-205ENST00000536107 CES1P23141 567 aa6.25□□□□□ -1.41
YBX3-205ENST00000536107 ZNF438Q7Z4V0 828 aa6.25□□□□□ -1.41
YBX3-205ENST00000536107 NETO1Q8TDF5 533 aa6.25□□□□□ -1.41
YBX3-205ENST00000536107 PDGFDQ9GZP0 370 aaPredicted RBP6.25□□□□□ -1.41
YBX3-205ENST00000536107 VAV3Q9UKW4 847 aa6.25□□□□□ -1.41
YBX3-205ENST00000536107 ZFYVE9O95405 1425 aa6.25□□□□□ -1.41
YBX3-205ENST00000536107 NOS1P29475 1434 aa6.25□□□□□ -1.41
YBX3-205ENST00000536107 ADGRB2O60241 1585 aa6.24□□□□□ -1.41
YBX3-205ENST00000536107 NRKQ7Z2Y5 1582 aa6.24□□□□□ -1.41
YBX3-205ENST00000536107 LRPPRCP42704 1394 aaKnown RBP6.24□□□□□ -1.41
YBX3-205ENST00000536107 ZSCAN22P10073 491 aaPredicted RBP6.24□□□□□ -1.41
YBX3-205ENST00000536107 ESRRAP11474 423 aaPredicted RBP6.24□□□□□ -1.41
YBX3-205ENST00000536107 PDE3BQ13370 1112 aa6.24□□□□□ -1.41
YBX3-205ENST00000536107 CYP27C1Q4G0S4 372 aa6.24□□□□□ -1.41
YBX3-205ENST00000536107 XKR5Q6UX68 686 aa6.24□□□□□ -1.41
YBX3-205ENST00000536107 DNAJC5GQ8N7S2 189 aa6.24□□□□□ -1.41
YBX3-205ENST00000536107 C1orf127Q8N9H9 656 aa6.24□□□□□ -1.41
YBX3-205ENST00000536107 FLAD1Q8NFF5 587 aa6.24□□□□□ -1.41
YBX3-205ENST00000536107 PRIMPOLQ96LW4 560 aa6.24□□□□□ -1.41
YBX3-205ENST00000536107 NRSN2Q9GZP1 204 aa6.24□□□□□ -1.41
YBX3-205ENST00000536107 LMCD1Q9NZU5 365 aa6.24□□□□□ -1.41
YBX3-205ENST00000536107 RGPD1P0DJD0 1748 aa6.24□□□□□ -1.41
YBX3-205ENST00000536107 TRPM2O94759 1503 aa6.24□□□□□ -1.41
YBX3-205ENST00000536107 EHBP1L1Q8N3D4 1523 aa6.24□□□□□ -1.41
YBX3-205ENST00000536107 ATP10DQ9P241 1426 aa6.24□□□□□ -1.41
YBX3-205ENST00000536107 FYCO1Q9BQS8 1478 aa6.23□□□□□ -1.41
YBX3-205ENST00000536107 CEP152O94986 1710 aa6.23□□□□□ -1.41
YBX3-205ENST00000536107 PRKCQQ04759 706 aa6.23□□□□□ -1.41
YBX3-205ENST00000536107 OCLNQ16625 522 aa6.23□□□□□ -1.41
YBX3-205ENST00000536107 SWI5Q1ZZU3 235 aa6.23□□□□□ -1.41
YBX3-205ENST00000536107 ZSWIM9Q86XI8 627 aa6.23□□□□□ -1.41
YBX3-205ENST00000536107 PMEPA1Q969W9 287 aa6.23□□□□□ -1.41
YBX3-205ENST00000536107 GSX1Q9H4S2 264 aaPredicted RBP6.23□□□□□ -1.41
YBX3-205ENST00000536107 RRP7BPQ9NSQ0 103 aa6.23□□□□□ -1.41
YBX3-205ENST00000536107 FAM105AQ9NUU6 356 aa6.23□□□□□ -1.41
YBX3-205ENST00000536107 BTG4Q9NY30 223 aa6.23□□□□□ -1.41
YBX3-205ENST00000536107 STIM2Q9P246 746 aa6.23□□□□□ -1.41
YBX3-205ENST00000536107 LRRIQ1Q96JM4 1722 aa6.22□□□□□ -1.41
YBX3-205ENST00000536107 AATKQ6ZMQ8 1374 aa6.22□□□□□ -1.41
YBX3-205ENST00000536107 DLC1Q96QB1 1528 aa6.22□□□□□ -1.41
YBX3-205ENST00000536107 ZBTB39O15060 712 aa6.22□□□□□ -1.41
YBX3-205ENST00000536107 GRIN3BO60391 1043 aa6.22□□□□□ -1.41
YBX3-205ENST00000536107 LMOD1P29536 600 aaPredicted RBP6.22□□□□□ -1.41
YBX3-205ENST00000536107 GSTM4Q03013 218 aa6.22□□□□□ -1.41
YBX3-205ENST00000536107 MLANAQ16655 118 aa6.22□□□□□ -1.41
YBX3-205ENST00000536107 PLD6Q8N2A8 252 aaKnown RBP6.22□□□□□ -1.41
YBX3-205ENST00000536107 ABTB2Q8N961 1025 aa6.22□□□□□ -1.41
YBX3-205ENST00000536107 COL22A1Q8NFW1 1626 aaPredicted RBP6.21□□□□□ -1.41
YBX3-205ENST00000536107 ZNF503-AS2A6NEH8 195 aa6.21□□□□□ -1.42
YBX3-205ENST00000536107 RPLP1P05386 114 aaKnown RBP6.21□□□□□ -1.42
YBX3-205ENST00000536107 FLIIQ13045 1269 aa6.21□□□□□ -1.42
YBX3-205ENST00000536107 HP1BP3Q5SSJ5 553 aaPredicted RBP6.21□□□□□ -1.42
YBX3-205ENST00000536107 DYMQ7RTS9 669 aa6.21□□□□□ -1.42
YBX3-205ENST00000536107 NUDT16Q96DE0 195 aaKnown RBP6.21□□□□□ -1.42
YBX3-205ENST00000536107 OSMRQ99650 979 aa6.21□□□□□ -1.42
YBX3-205ENST00000536107 MTFR1LQ9H019 292 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms