RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 IRF6O14896 467 aa12.82□□□□□ -0.36
UBE3B-205ENST00000535900 INPP5BP32019 993 aa12.82□□□□□ -0.36
UBE3B-205ENST00000535900 NT5C2P49902 561 aa12.82□□□□□ -0.36
UBE3B-205ENST00000535900 NFIAQ12857 509 aa12.82□□□□□ -0.36
UBE3B-205ENST00000535900 KRT32Q14532 448 aa12.82□□□□□ -0.36
UBE3B-205ENST00000535900 TSGA10IPQ3SY00 556 aa12.82□□□□□ -0.36
UBE3B-205ENST00000535900 ZCCHC17Q9NP64 241 aaKnown RBP12.82□□□□□ -0.36
UBE3B-205ENST00000535900 TAOK2Q9UL54 1235 aa12.82□□□□□ -0.36
UBE3B-205ENST00000535900 BTBD19C9JJ37 291 aa12.81□□□□□ -0.36
UBE3B-205ENST00000535900 NPM3O75607 178 aaKnown RBP12.81□□□□□ -0.36
UBE3B-205ENST00000535900 PTH1RQ03431 593 aa12.81□□□□□ -0.36
UBE3B-205ENST00000535900 PPATQ06203 517 aa12.81□□□□□ -0.36
UBE3B-205ENST00000535900 KIF22Q14807 665 aa12.81□□□□□ -0.36
UBE3B-205ENST00000535900 NECTIN1Q15223 517 aa12.81□□□□□ -0.36
UBE3B-205ENST00000535900 SLC9C1Q4G0N8 1177 aa12.81□□□□□ -0.36
UBE3B-205ENST00000535900 CCDC129Q6ZRS4 1044 aa12.81□□□□□ -0.36
UBE3B-205ENST00000535900 ADGRA1Q86SQ6 560 aa12.81□□□□□ -0.36
UBE3B-205ENST00000535900 ARMC5Q96C12 935 aa12.81□□□□□ -0.36
UBE3B-205ENST00000535900 USP40Q9NVE5 1235 aa12.81□□□□□ -0.36
UBE3B-205ENST00000535900 RBM8AQ9Y5S9 174 aaKnown RBP12.81□□□□□ -0.36
UBE3B-205ENST00000535900 SLC4A4Q9Y6R1 1079 aa12.81□□□□□ -0.36
UBE3B-205ENST00000535900 DOCK1Q14185 1865 aa12.8□□□□□ -0.36
UBE3B-205ENST00000535900 POTEFA5A3E0 1075 aa12.8□□□□□ -0.36
UBE3B-205ENST00000535900 TLR2O60603 784 aa12.8□□□□□ -0.36
UBE3B-205ENST00000535900 CHGBP05060 677 aa12.8□□□□□ -0.36
UBE3B-205ENST00000535900 APPP05067 770 aa12.8□□□□□ -0.36
UBE3B-205ENST00000535900 BTDP43251 543 aa12.8□□□□□ -0.36
UBE3B-205ENST00000535900 IMMTQ16891 758 aaKnown RBP12.8□□□□□ -0.36
UBE3B-205ENST00000535900 SLFNL1Q499Z3 407 aa12.8□□□□□ -0.36
UBE3B-205ENST00000535900 ZSCAN29Q8IWY8 852 aaPredicted RBP12.8□□□□□ -0.36
UBE3B-205ENST00000535900 LCORLQ8N3X6 602 aa12.8□□□□□ -0.36
UBE3B-205ENST00000535900 MIGA1Q8NAN2 632 aa12.8□□□□□ -0.36
UBE3B-205ENST00000535900 NAPBQ9H115 298 aa12.8□□□□□ -0.36
UBE3B-205ENST00000535900 ARMT1Q9H993 441 aa12.8□□□□□ -0.36
UBE3B-205ENST00000535900 AATFQ9NY61 560 aaKnown RBP eCLIP12.8□□□□□ -0.36
UBE3B-205ENST00000535900 PTCH2Q9Y6C5 1203 aa12.8□□□□□ -0.36
UBE3B-205ENST00000535900 HTTP42858 3142 aa12.79□□□□□ -0.36
UBE3B-205ENST00000535900 GSG1L2A8MUP6 293 aa12.79□□□□□ -0.36
UBE3B-205ENST00000535900 FGAP02671 866 aa12.79□□□□□ -0.36
UBE3B-205ENST00000535900 PCP11498 1178 aaKnown RBP12.79□□□□□ -0.36
UBE3B-205ENST00000535900 PSMA5P28066 241 aa12.79□□□□□ -0.36
UBE3B-205ENST00000535900 CAP1Q01518 475 aa12.79□□□□□ -0.36
UBE3B-205ENST00000535900 CREB3L3Q68CJ9 461 aa12.79□□□□□ -0.36
UBE3B-205ENST00000535900 AMOTL1Q8IY63 956 aa12.79□□□□□ -0.36
UBE3B-205ENST00000535900 IFNL3Q8IZI9 196 aa12.79□□□□□ -0.36
UBE3B-205ENST00000535900 IPO9Q96P70 1041 aaKnown RBP12.79□□□□□ -0.36
UBE3B-205ENST00000535900 TM6SF1Q9BZW5 370 aa12.79□□□□□ -0.36
UBE3B-205ENST00000535900 FAM198AQ9UFP1 575 aa12.79□□□□□ -0.36
UBE3B-205ENST00000535900 FOXP2O15409 715 aa12.78□□□□□ -0.36
UBE3B-205ENST00000535900 ECM2O94769 699 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-205ENST00000535900 HMGB1P09429 215 aaKnown RBP12.78□□□□□ -0.36
UBE3B-205ENST00000535900 TDO2P48775 406 aa12.78□□□□□ -0.36
UBE3B-205ENST00000535900 RHBDL3P58872 404 aa12.78□□□□□ -0.36
UBE3B-205ENST00000535900 LACTBP83111 547 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-205ENST00000535900 PICALMQ13492 652 aa12.78□□□□□ -0.36
UBE3B-205ENST00000535900 RABEP1Q15276 862 aa12.78□□□□□ -0.36
UBE3B-205ENST00000535900 SBK1Q52WX2 424 aa12.78□□□□□ -0.36
UBE3B-205ENST00000535900 NOL9Q5SY16 702 aaKnown RBP12.78□□□□□ -0.36
UBE3B-205ENST00000535900 VPS53Q5VIR6 699 aa12.78□□□□□ -0.36
UBE3B-205ENST00000535900 NBPF11Q86T75 865 aa12.78□□□□□ -0.36
UBE3B-205ENST00000535900 TEX11Q8IYF3 940 aa12.78□□□□□ -0.36
UBE3B-205ENST00000535900 TMEM106CQ9BVX2 250 aa12.78□□□□□ -0.36
UBE3B-205ENST00000535900 ARHGAP39Q9C0H5 1083 aa12.78□□□□□ -0.36
UBE3B-205ENST00000535900 ARPP21Q9UBL0 812 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-205ENST00000535900 PDHXO00330 501 aa12.77□□□□□ -0.37
UBE3B-205ENST00000535900 ZNF213O14771 459 aa12.77□□□□□ -0.37
UBE3B-205ENST00000535900 SLC27A2O14975 620 aa12.77□□□□□ -0.37
UBE3B-205ENST00000535900 ENTPD3O75355 529 aa12.77□□□□□ -0.37
UBE3B-205ENST00000535900 SLC3A2P08195 630 aaKnown RBP12.77□□□□□ -0.37
UBE3B-205ENST00000535900 USP5P45974 858 aa12.77□□□□□ -0.37
UBE3B-205ENST00000535900 DYNLL1P63167 89 aaKnown RBP12.77□□□□□ -0.37
UBE3B-205ENST00000535900 SLC4A8Q2Y0W8 1093 aa12.77□□□□□ -0.37
UBE3B-205ENST00000535900 ANKRD23Q86SG2 305 aa12.77□□□□□ -0.37
UBE3B-205ENST00000535900 SH3RF3Q8TEJ3 882 aaPredicted RBP12.77□□□□□ -0.37
UBE3B-205ENST00000535900 ZNF333Q96JL9 665 aa12.77□□□□□ -0.37
UBE3B-205ENST00000535900 PARK7Q99497 189 aaKnown RBP12.77□□□□□ -0.37
UBE3B-205ENST00000535900 IDI2Q9BXS1 227 aa12.77□□□□□ -0.37
UBE3B-205ENST00000535900 RNF41Q9H4P4 317 aaPredicted RBP12.77□□□□□ -0.37
UBE3B-205ENST00000535900 DCP1AQ9NPI6 582 aaPredicted RBP12.77□□□□□ -0.37
UBE3B-205ENST00000535900 PICK1Q9NRD5 415 aa12.77□□□□□ -0.37
UBE3B-205ENST00000535900 CPA4Q9UI42 421 aa12.77□□□□□ -0.37
UBE3B-205ENST00000535900 ZNF112Q9UJU3 913 aa12.77□□□□□ -0.37
UBE3B-205ENST00000535900 ANAPC4Q9UJX5 808 aa12.77□□□□□ -0.37
UBE3B-205ENST00000535900 KCNH4Q9UQ05 1017 aa12.77□□□□□ -0.37
UBE3B-205ENST00000535900 ATRNL1Q5VV63 1379 aa12.77□□□□□ -0.37
UBE3B-205ENST00000535900 MYCP01106 439 aaPredicted RBP12.76□□□□□ -0.37
UBE3B-205ENST00000535900 BECN1Q14457 450 aa12.76□□□□□ -0.37
UBE3B-205ENST00000535900 ZFPM1Q8IX07 1006 aa12.76□□□□□ -0.37
UBE3B-205ENST00000535900 SCYL3Q8IZE3 742 aa12.76□□□□□ -0.37
UBE3B-205ENST00000535900 CNNM2Q9H8M5 875 aa12.76□□□□□ -0.37
UBE3B-205ENST00000535900 ZNF287Q9HBT7 754 aa12.76□□□□□ -0.37
UBE3B-205ENST00000535900 PCDH10Q9P2E7 1040 aa12.76□□□□□ -0.37
UBE3B-205ENST00000535900 SNX14Q9Y5W7 946 aa12.76□□□□□ -0.37
UBE3B-205ENST00000535900 PTPRFP10586 1907 aa12.76□□□□□ -0.37
UBE3B-205ENST00000535900 PRKAB2O43741 272 aa12.75□□□□□ -0.37
UBE3B-205ENST00000535900 GNRH1P01148 92 aa12.75□□□□□ -0.37
UBE3B-205ENST00000535900 COL2A1P02458 1487 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-205ENST00000535900 CYP21A2P08686 494 aa12.75□□□□□ -0.37
UBE3B-205ENST00000535900 EN2P19622 333 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-205ENST00000535900 PRMT2P55345 433 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms