RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 FLT1P17948 1338 aa17.3■□□□□ 0.36
MSRB3-206ENST00000535664 GPR25O00155 361 aa17.3■□□□□ 0.36
MSRB3-206ENST00000535664 IRF6O14896 467 aa17.3■□□□□ 0.36
MSRB3-206ENST00000535664 TBC1D8O95759 1140 aa17.3■□□□□ 0.36
MSRB3-206ENST00000535664 ARHGEF6Q15052 776 aa17.3■□□□□ 0.36
MSRB3-206ENST00000535664 TTC6Q86TZ1 520 aa17.3■□□□□ 0.36
MSRB3-206ENST00000535664 METTL16Q86W50 562 aaKnown RBP17.3■□□□□ 0.36
MSRB3-206ENST00000535664 CRNKL1Q9BZJ0 848 aaKnown RBP17.3■□□□□ 0.36
MSRB3-206ENST00000535664 PALD1Q9ULE6 856 aa17.3■□□□□ 0.36
MSRB3-206ENST00000535664 KCNH4Q9UQ05 1017 aa17.3■□□□□ 0.36
MSRB3-206ENST00000535664 FKTNO75072 461 aa17.29■□□□□ 0.36
MSRB3-206ENST00000535664 FASTKD5Q7L8L6 764 aaKnown RBP17.29■□□□□ 0.36
MSRB3-206ENST00000535664 CRACR2BQ8N4Y2 399 aaPredicted RBP17.29■□□□□ 0.36
MSRB3-206ENST00000535664 ZFYVE28Q9HCC9 887 aa17.29■□□□□ 0.36
MSRB3-206ENST00000535664 EPB41L4AQ9HCS5 686 aaPredicted RBP17.29■□□□□ 0.36
MSRB3-206ENST00000535664 U3KPZ7 1027 aaPredicted RBP17.29■□□□□ 0.36
MSRB3-206ENST00000535664 LAMB1P07942 1786 aa17.29■□□□□ 0.36
MSRB3-206ENST00000535664 LAMA4Q16363 1823 aa17.28■□□□□ 0.36
MSRB3-206ENST00000535664 ZMYM6O95789 1325 aa17.28■□□□□ 0.36
MSRB3-206ENST00000535664 DDX60LQ5H9U9 1706 aaKnown RBP17.28■□□□□ 0.36
MSRB3-206ENST00000535664 GSG1L2A8MUP6 293 aa17.28■□□□□ 0.36
MSRB3-206ENST00000535664 IGF2BP3O00425 579 aaKnown RBP eCLIP17.28■□□□□ 0.36
MSRB3-206ENST00000535664 PRKAB2O43741 272 aa17.28■□□□□ 0.36
MSRB3-206ENST00000535664 PTPRAP18433 802 aa17.28■□□□□ 0.36
MSRB3-206ENST00000535664 CTU1Q7Z7A3 348 aaKnown RBP17.28■□□□□ 0.36
MSRB3-206ENST00000535664 MAPKAPK5Q8IW41 473 aa17.28■□□□□ 0.36
MSRB3-206ENST00000535664 BRI3BPQ8WY22 251 aa17.28■□□□□ 0.36
MSRB3-206ENST00000535664 DDRGK1Q96HY6 314 aa17.28■□□□□ 0.36
MSRB3-206ENST00000535664 CDK5RAP2Q96SN8 1893 aa17.27■□□□□ 0.36
MSRB3-206ENST00000535664 GNAT2P19087 354 aa17.27■□□□□ 0.36
MSRB3-206ENST00000535664 ALX1Q15699 326 aa17.27■□□□□ 0.36
MSRB3-206ENST00000535664 ANKRD23Q86SG2 305 aa17.27■□□□□ 0.36
MSRB3-206ENST00000535664 RASEFQ8IZ41 740 aa17.27■□□□□ 0.36
MSRB3-206ENST00000535664 CNKSR2Q8WXI2 1034 aa17.27■□□□□ 0.36
MSRB3-206ENST00000535664 PTPN18Q99952 460 aa17.27■□□□□ 0.36
MSRB3-206ENST00000535664 EHD4Q9H223 541 aa17.27■□□□□ 0.36
MSRB3-206ENST00000535664 AS3MTQ9HBK9 375 aa17.27■□□□□ 0.36
MSRB3-206ENST00000535664 ZHX2Q9Y6X8 837 aa17.27■□□□□ 0.36
MSRB3-206ENST00000535664 OTOFQ9HC10 1997 aa17.26■□□□□ 0.35
MSRB3-206ENST00000535664 PATL2C9JE40 543 aaKnown RBP17.26■□□□□ 0.35
MSRB3-206ENST00000535664 SLC27A2O14975 620 aa17.26■□□□□ 0.35
MSRB3-206ENST00000535664 ASNSP08243 561 aa17.26■□□□□ 0.35
MSRB3-206ENST00000535664 MCCP23508 829 aa17.26■□□□□ 0.35
MSRB3-206ENST00000535664 CAP2P40123 477 aa17.26■□□□□ 0.35
MSRB3-206ENST00000535664 ANAPC15P60006 121 aa17.26■□□□□ 0.35
MSRB3-206ENST00000535664 DGKZQ13574 1117 aa17.26■□□□□ 0.35
MSRB3-206ENST00000535664 CREB3L3Q68CJ9 461 aa17.26■□□□□ 0.35
MSRB3-206ENST00000535664 AMOTL1Q8IY63 956 aa17.26■□□□□ 0.35
MSRB3-206ENST00000535664 ZNF296Q8WUU4 475 aaPredicted RBP17.26■□□□□ 0.35
MSRB3-206ENST00000535664 ERO1AQ96HE7 468 aa17.26■□□□□ 0.35
MSRB3-206ENST00000535664 ATP8A2Q9NTI2 1148 aa17.26■□□□□ 0.35
MSRB3-206ENST00000535664 SNX14Q9Y5W7 946 aa17.26■□□□□ 0.35
MSRB3-206ENST00000535664 TAF6LQ9Y6J9 622 aa17.26■□□□□ 0.35
MSRB3-206ENST00000535664 SLC4A4Q9Y6R1 1079 aa17.26■□□□□ 0.35
MSRB3-206ENST00000535664 FOCADQ5VW36 1801 aa17.26■□□□□ 0.35
MSRB3-206ENST00000535664 FGAP02671 866 aa17.25■□□□□ 0.35
MSRB3-206ENST00000535664 TAF1CQ15572 869 aaPredicted RBP17.25■□□□□ 0.35
MSRB3-206ENST00000535664 SERPINB13Q9UIV8 391 aa17.25■□□□□ 0.35
MSRB3-206ENST00000535664 SLC45A1Q9Y2W3 748 aa17.25■□□□□ 0.35
MSRB3-206ENST00000535664 AFG3L2Q9Y4W6 797 aa17.25■□□□□ 0.35
MSRB3-206ENST00000535664 USP17L5A8MUK1 530 aa17.24■□□□□ 0.35
MSRB3-206ENST00000535664 POLR3DP05423 398 aaPredicted RBP17.24■□□□□ 0.35
MSRB3-206ENST00000535664 CYP21A2P08686 494 aa17.24■□□□□ 0.35
MSRB3-206ENST00000535664 CRHR2Q13324 411 aa17.24■□□□□ 0.35
MSRB3-206ENST00000535664 TSGA10IPQ3SY00 556 aa17.24■□□□□ 0.35
MSRB3-206ENST00000535664 IFNL3Q8IZI9 196 aa17.24■□□□□ 0.35
MSRB3-206ENST00000535664 SDR42E1Q8WUS8 393 aa17.24■□□□□ 0.35
MSRB3-206ENST00000535664 NAV1Q8NEY1 1877 aa17.24■□□□□ 0.35
MSRB3-206ENST00000535664 A0A0G2JLL6 359 aaPredicted RBP17.23■□□□□ 0.35
MSRB3-206ENST00000535664 BTBD19C9JJ37 291 aa17.23■□□□□ 0.35
MSRB3-206ENST00000535664 TLR2O60603 784 aa17.23■□□□□ 0.35
MSRB3-206ENST00000535664 SP3Q02447 781 aa17.23■□□□□ 0.35
MSRB3-206ENST00000535664 GIMAP6Q6P9H5 292 aa17.23■□□□□ 0.35
MSRB3-206ENST00000535664 PRRT2Q7Z6L0 340 aaPredicted RBP17.23■□□□□ 0.35
MSRB3-206ENST00000535664 FAM43AQ8N2R8 423 aa17.23■□□□□ 0.35
MSRB3-206ENST00000535664 ABHD8Q96I13 439 aa17.23■□□□□ 0.35
MSRB3-206ENST00000535664 PABPC4Q13310 644 aaKnown RBP eCLIP17.22■□□□□ 0.35
MSRB3-206ENST00000535664 KIF22Q14807 665 aa17.22■□□□□ 0.35
MSRB3-206ENST00000535664 TATDN1Q6P1N9 297 aa17.22■□□□□ 0.35
MSRB3-206ENST00000535664 PROCA1Q8NCQ7 364 aaPredicted RBP17.22■□□□□ 0.35
MSRB3-206ENST00000535664 ZNF280CQ8ND82 737 aa17.22■□□□□ 0.35
MSRB3-206ENST00000535664 PARK7Q99497 189 aaKnown RBP17.22■□□□□ 0.35
MSRB3-206ENST00000535664 WDR18Q9BV38 432 aa17.22■□□□□ 0.35
MSRB3-206ENST00000535664 MCOLN1Q9GZU1 580 aa17.22■□□□□ 0.35
MSRB3-206ENST00000535664 NBPF3Q9H094 633 aa17.22■□□□□ 0.35
MSRB3-206ENST00000535664 DCP1AQ9NPI6 582 aaPredicted RBP17.22■□□□□ 0.35
MSRB3-206ENST00000535664 SAP30BPQ9UHR5 308 aaKnown RBP17.22■□□□□ 0.35
MSRB3-206ENST00000535664 CTNNA3Q9UI47 895 aa17.22■□□□□ 0.35
MSRB3-206ENST00000535664 C19orf81C9J6K1 198 aa17.21■□□□□ 0.35
MSRB3-206ENST00000535664 PDHXO00330 501 aa17.21■□□□□ 0.35
MSRB3-206ENST00000535664 GNRH1P01148 92 aa17.21■□□□□ 0.35
MSRB3-206ENST00000535664 RNF20Q5VTR2 975 aa17.21■□□□□ 0.35
MSRB3-206ENST00000535664 STOX1Q6ZVD7 989 aa17.21■□□□□ 0.35
MSRB3-206ENST00000535664 MCM9Q9NXL9 1143 aa17.21■□□□□ 0.35
MSRB3-206ENST00000535664 SWAP70Q9UH65 585 aa17.21■□□□□ 0.35
MSRB3-206ENST00000535664 PNMA3Q9UL41 463 aa17.21■□□□□ 0.35
MSRB3-206ENST00000535664 BAZ2AQ9UIF9 1905 aaKnown RBP17.2■□□□□ 0.34
MSRB3-206ENST00000535664 APPP05067 770 aa17.2■□□□□ 0.34
MSRB3-206ENST00000535664 ADCK5Q3MIX3 580 aa17.2■□□□□ 0.34
MSRB3-206ENST00000535664 NACAP1Q9BZK3 213 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms