RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 RASA1P20936 1047 aa26.91■■□□□ 1.9
RBFOX1-206ENST00000535565 LMOD1P29536 600 aaPredicted RBP26.91■■□□□ 1.9
RBFOX1-206ENST00000535565 TFAP4Q01664 338 aa26.91■■□□□ 1.9
RBFOX1-206ENST00000535565 STK3Q13188 491 aa26.91■■□□□ 1.9
RBFOX1-206ENST00000535565 DPY19L2Q6NUT2 758 aa26.91■■□□□ 1.9
RBFOX1-206ENST00000535565 CHMP4CQ96CF2 233 aa26.91■■□□□ 1.9
RBFOX1-206ENST00000535565 SRCAPQ6ZRS2 3230 aa26.9■■□□□ 1.9
RBFOX1-206ENST00000535565 CCDC69A6NI79 296 aa26.9■■□□□ 1.9
RBFOX1-206ENST00000535565 DDNO94850 711 aaPredicted RBP26.9■■□□□ 1.9
RBFOX1-206ENST00000535565 TNFAIP1Q13829 316 aa26.9■■□□□ 1.9
RBFOX1-206ENST00000535565 CCDC178Q5BJE1 867 aa26.9■■□□□ 1.9
RBFOX1-206ENST00000535565 SH3BP5LQ7L8J4 393 aa26.9■■□□□ 1.9
RBFOX1-206ENST00000535565 FOXP4Q8IVH2 680 aaPredicted RBP26.9■■□□□ 1.9
RBFOX1-206ENST00000535565 NECAB1Q8N987 351 aa26.9■■□□□ 1.9
RBFOX1-206ENST00000535565 GTF3C6Q969F1 213 aa26.9■■□□□ 1.9
RBFOX1-206ENST00000535565 CWC22Q9HCG8 908 aaKnown RBP26.9■■□□□ 1.9
RBFOX1-206ENST00000535565 PFKFB2O60825 505 aa26.89■■□□□ 1.9
RBFOX1-206ENST00000535565 EGFRP00533 1210 aa26.89■■□□□ 1.9
RBFOX1-206ENST00000535565 PDIA3P30101 505 aaKnown RBP26.89■■□□□ 1.9
RBFOX1-206ENST00000535565 CNTNAP1P78357 1384 aa26.89■■□□□ 1.89
RBFOX1-206ENST00000535565 GOLGA8BA8MQT2 603 aa26.88■■□□□ 1.89
RBFOX1-206ENST00000535565 SYNE3Q6ZMZ3 975 aa26.88■■□□□ 1.89
RBFOX1-206ENST00000535565 CSRNP1Q96S65 589 aa26.88■■□□□ 1.89
RBFOX1-206ENST00000535565 BRPF3Q9ULD4 1205 aa26.88■■□□□ 1.89
RBFOX1-206ENST00000535565 SEC23AQ15436 765 aa26.88■■□□□ 1.89
RBFOX1-206ENST00000535565 IFIT1BQ5T764 474 aaKnown RBP26.88■■□□□ 1.89
RBFOX1-206ENST00000535565 ENAHQ8N8S7 591 aaPredicted RBP26.88■■□□□ 1.89
RBFOX1-206ENST00000535565 SLC12A7Q9Y666 1083 aa26.88■■□□□ 1.89
RBFOX1-206ENST00000535565 UTRNP46939 3433 aa26.87■■□□□ 1.89
RBFOX1-206ENST00000535565 APOA5Q6Q788 366 aa26.87■■□□□ 1.89
RBFOX1-206ENST00000535565 TCP11L1Q9NUJ3 509 aa26.87■■□□□ 1.89
RBFOX1-206ENST00000535565 ZBTB43O43298 467 aa26.85■■□□□ 1.89
RBFOX1-206ENST00000535565 SHMT1P34896 483 aa26.85■■□□□ 1.89
RBFOX1-206ENST00000535565 EPS15P42566 896 aa26.85■■□□□ 1.89
RBFOX1-206ENST00000535565 ST3GAL1Q11201 340 aa26.85■■□□□ 1.89
RBFOX1-206ENST00000535565 SCRN1Q12765 414 aa26.85■■□□□ 1.89
RBFOX1-206ENST00000535565 METTL16Q86W50 562 aaKnown RBP26.85■■□□□ 1.89
RBFOX1-206ENST00000535565 NEDD1Q8NHV4 660 aa26.85■■□□□ 1.89
RBFOX1-206ENST00000535565 SENP2Q9HC62 589 aa26.85■■□□□ 1.89
RBFOX1-206ENST00000535565 HERC5Q9UII4 1024 aaKnown RBP26.85■■□□□ 1.89
RBFOX1-206ENST00000535565 HACL1Q9UJ83 578 aa26.85■■□□□ 1.89
RBFOX1-206ENST00000535565 SMC3Q9UQE7 1217 aa26.85■■□□□ 1.89
RBFOX1-206ENST00000535565 DHX16O60231 1041 aaKnown RBP26.84■■□□□ 1.89
RBFOX1-206ENST00000535565 CIZ1Q9ULV3 898 aaPredicted RBP26.84■■□□□ 1.89
RBFOX1-206ENST00000535565 PLIN4Q96Q06 1357 aa26.84■■□□□ 1.89
RBFOX1-206ENST00000535565 NMT2O60551 498 aa26.84■■□□□ 1.89
RBFOX1-206ENST00000535565 CCT2P78371 535 aaKnown RBP26.84■■□□□ 1.89
RBFOX1-206ENST00000535565 DGKHQ86XP1 1220 aa26.84■■□□□ 1.89
RBFOX1-206ENST00000535565 TRPM4Q8TD43 1214 aa26.84■■□□□ 1.89
RBFOX1-206ENST00000535565 CCDC17Q96LX7 622 aa26.84■■□□□ 1.89
RBFOX1-206ENST00000535565 TMEM39BQ9GZU3 492 aa26.84■■□□□ 1.89
RBFOX1-206ENST00000535565 ADARB2Q9NS39 739 aaKnown RBP26.84■■□□□ 1.89
RBFOX1-206ENST00000535565 DDIT3P35638 169 aa26.83■■□□□ 1.89
RBFOX1-206ENST00000535565 METAP2P50579 478 aaKnown RBP eCLIP26.83■■□□□ 1.89
RBFOX1-206ENST00000535565 RCAN1P53805 252 aa26.83■■□□□ 1.89
RBFOX1-206ENST00000535565 MICU3Q86XE3 530 aa26.83■■□□□ 1.89
RBFOX1-206ENST00000535565 APOBEC3FQ8IUX4 373 aaKnown RBP26.83■■□□□ 1.89
RBFOX1-206ENST00000535565 LLPHQ9BRT6 129 aaKnown RBP26.83■■□□□ 1.89
RBFOX1-206ENST00000535565 DNAJC18Q9H819 358 aa26.83■■□□□ 1.89
RBFOX1-206ENST00000535565 CHMP5Q9NZZ3 219 aa26.83■■□□□ 1.89
RBFOX1-206ENST00000535565 HPS5Q9UPZ3 1129 aa26.83■■□□□ 1.89
RBFOX1-206ENST00000535565 GREB1LQ9C091 1923 aaPredicted RBP26.82■■□□□ 1.88
RBFOX1-206ENST00000535565 RASA3Q14644 834 aa26.82■■□□□ 1.88
RBFOX1-206ENST00000535565 CATIPQ7Z7H3 387 aa26.82■■□□□ 1.88
RBFOX1-206ENST00000535565 ZNF654Q8IZM8 581 aa26.82■■□□□ 1.88
RBFOX1-206ENST00000535565 L3MBTL3Q96JM7 780 aaPredicted RBP26.82■■□□□ 1.88
RBFOX1-206ENST00000535565 IL17RBQ9NRM6 502 aa26.82■■□□□ 1.88
RBFOX1-206ENST00000535565 TATDN1Q6P1N9 297 aa26.81■■□□□ 1.88
RBFOX1-206ENST00000535565 ANKS1AQ92625 1134 aa26.81■■□□□ 1.88
RBFOX1-206ENST00000535565 NID2Q14112 1375 aa26.81■■□□□ 1.88
RBFOX1-206ENST00000535565 ASTN2O75129 1339 aaPredicted RBP26.8■■□□□ 1.88
RBFOX1-206ENST00000535565 GLTPD2A6NH11 291 aa26.8■■□□□ 1.88
RBFOX1-206ENST00000535565 GOLGA8AA7E2F4 631 aa26.8■■□□□ 1.88
RBFOX1-206ENST00000535565 AKR1B1P15121 316 aa26.8■■□□□ 1.88
RBFOX1-206ENST00000535565 CERKLQ49MI3 558 aaPredicted RBP26.8■■□□□ 1.88
RBFOX1-206ENST00000535565 KAT14Q9H8E8 782 aa26.8■■□□□ 1.88
RBFOX1-206ENST00000535565 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.8■■□□□ 1.88
RBFOX1-206ENST00000535565 NCOA5Q9HCD5 579 aaKnown RBP26.8■■□□□ 1.88
RBFOX1-206ENST00000535565 SCN4AP35499 1836 aa26.8■■□□□ 1.88
RBFOX1-206ENST00000535565 FAM196BA6NMK8 535 aa26.8■■□□□ 1.88
RBFOX1-206ENST00000535565 CALM1P0DP23 149 aa26.8■■□□□ 1.88
RBFOX1-206ENST00000535565 CALM2P0DP24 149 aa26.8■■□□□ 1.88
RBFOX1-206ENST00000535565 CALM3P0DP25 149 aa26.8■■□□□ 1.88
RBFOX1-206ENST00000535565 PPP4R3BQ5MIZ7 849 aa26.8■■□□□ 1.88
RBFOX1-206ENST00000535565 ANGEL2Q5VTE6 544 aaKnown RBP26.8■■□□□ 1.88
RBFOX1-206ENST00000535565 RAB11FIP4Q86YS3 637 aa26.8■■□□□ 1.88
RBFOX1-206ENST00000535565 MPHOSPH10O00566 681 aaKnown RBP26.79■■□□□ 1.88
RBFOX1-206ENST00000535565 CPLX1O14810 134 aa26.79■■□□□ 1.88
RBFOX1-206ENST00000535565 DDAH1O94760 285 aa26.79■■□□□ 1.88
RBFOX1-206ENST00000535565 GJB2P29033 226 aa26.79■■□□□ 1.88
RBFOX1-206ENST00000535565 RCSD1Q6JBY9 416 aa26.79■■□□□ 1.88
RBFOX1-206ENST00000535565 MYL10Q9BUA6 226 aa26.79■■□□□ 1.88
RBFOX1-206ENST00000535565 STX8Q9UNK0 236 aa26.79■■□□□ 1.88
RBFOX1-206ENST00000535565 TBC1D12O60347 775 aa26.78■■□□□ 1.88
RBFOX1-206ENST00000535565 CPLX2Q6PUV4 134 aaKnown RBP26.78■■□□□ 1.88
RBFOX1-206ENST00000535565 CEP95Q96GE4 821 aa26.78■■□□□ 1.88
RBFOX1-206ENST00000535565 DEFB129Q9H1M3 183 aa26.78■■□□□ 1.88
RBFOX1-206ENST00000535565 GGA3Q9NZ52 723 aa26.78■■□□□ 1.88
RBFOX1-206ENST00000535565 CCDC196A0A1B0GTZ2 297 aa26.77■■□□□ 1.88
RBFOX1-206ENST00000535565 RXRAP19793 462 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms