RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 CERKLQ49MI3 558 aaPredicted RBP14.33□□□□□ -0.12
KNTC1-208ENST00000535410 TRIM47Q96LD4 638 aa14.33□□□□□ -0.12
KNTC1-208ENST00000535410 MCM9Q9NXL9 1143 aa14.33□□□□□ -0.12
KNTC1-208ENST00000535410 PTCH2Q9Y6C5 1203 aa14.33□□□□□ -0.12
KNTC1-208ENST00000535410 ADGRA2Q96PE1 1338 aa14.33□□□□□ -0.12
KNTC1-208ENST00000535410 ERC2O15083 957 aa14.32□□□□□ -0.12
KNTC1-208ENST00000535410 ADD2P35612 726 aa14.32□□□□□ -0.12
KNTC1-208ENST00000535410 USP14P54578 494 aa14.32□□□□□ -0.12
KNTC1-208ENST00000535410 IRX3P78415 501 aaPredicted RBP14.32□□□□□ -0.12
KNTC1-208ENST00000535410 GTF3C2Q8WUA4 911 aaPredicted RBP14.32□□□□□ -0.12
KNTC1-208ENST00000535410 ZBTB21Q9ULJ3 1066 aa14.32□□□□□ -0.12
KNTC1-208ENST00000535410 TCRBV5S4A2TA0A5A2 114 aa14.31□□□□□ -0.12
KNTC1-208ENST00000535410 SMARCA5O60264 1052 aaPredicted RBP14.31□□□□□ -0.12
KNTC1-208ENST00000535410 GH2P01242 217 aa14.31□□□□□ -0.12
KNTC1-208ENST00000535410 ZFYP08048 801 aaPredicted RBP14.31□□□□□ -0.12
KNTC1-208ENST00000535410 HOXA7P31268 230 aaPredicted RBP14.31□□□□□ -0.12
KNTC1-208ENST00000535410 MTMR2Q13614 643 aa14.31□□□□□ -0.12
KNTC1-208ENST00000535410 RRP1BQ14684 758 aaKnown RBP14.31□□□□□ -0.12
KNTC1-208ENST00000535410 FAM110CQ1W6H9 321 aa14.31□□□□□ -0.12
KNTC1-208ENST00000535410 ABCB5Q2M3G0 1257 aa14.31□□□□□ -0.12
KNTC1-208ENST00000535410 SLC4A8Q2Y0W8 1093 aa14.31□□□□□ -0.12
KNTC1-208ENST00000535410 USP17L2Q6R6M4 530 aa14.31□□□□□ -0.12
KNTC1-208ENST00000535410 CCDC84Q86UT8 332 aaPredicted RBP14.31□□□□□ -0.12
KNTC1-208ENST00000535410 COA7Q96BR5 231 aa14.31□□□□□ -0.12
KNTC1-208ENST00000535410 ZNF333Q96JL9 665 aa14.31□□□□□ -0.12
KNTC1-208ENST00000535410 FEZ1Q99689 392 aa14.31□□□□□ -0.12
KNTC1-208ENST00000535410 ARHGAP39Q9C0H5 1083 aa14.31□□□□□ -0.12
KNTC1-208ENST00000535410 DNAJC18Q9H819 358 aa14.31□□□□□ -0.12
KNTC1-208ENST00000535410 SWAP70Q9UH65 585 aa14.31□□□□□ -0.12
KNTC1-208ENST00000535410 DOCK1Q14185 1865 aa14.3□□□□□ -0.12
KNTC1-208ENST00000535410 TNPO2O14787 897 aaKnown RBP14.3□□□□□ -0.12
KNTC1-208ENST00000535410 GDF11O95390 407 aa14.3□□□□□ -0.12
KNTC1-208ENST00000535410 UBXN2AP68543 259 aa14.3□□□□□ -0.12
KNTC1-208ENST00000535410 TREML2Q5T2D2 321 aa14.3□□□□□ -0.12
KNTC1-208ENST00000535410 ANKRD13CQ8N6S4 541 aa14.3□□□□□ -0.12
KNTC1-208ENST00000535410 NKX2-3Q8TAU0 364 aa14.3□□□□□ -0.12
KNTC1-208ENST00000535410 YTHDC1Q96MU7 727 aaKnown RBP14.3□□□□□ -0.12
KNTC1-208ENST00000535410 ASCC2Q9H1I8 757 aaPredicted RBP14.3□□□□□ -0.12
KNTC1-208ENST00000535410 DCP1AQ9NPI6 582 aaPredicted RBP14.3□□□□□ -0.12
KNTC1-208ENST00000535410 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.3□□□□□ -0.12
KNTC1-208ENST00000535410 BIN2Q9UBW5 565 aaPredicted RBP14.3□□□□□ -0.12
KNTC1-208ENST00000535410 TTC41PQ6P2S7 1318 aa14.3□□□□□ -0.12
KNTC1-208ENST00000535410 MYPNQ86TC9 1320 aa14.3□□□□□ -0.12
KNTC1-208ENST00000535410 CAPN2P17655 700 aa14.29□□□□□ -0.12
KNTC1-208ENST00000535410 GRK4P32298 578 aa14.29□□□□□ -0.12
KNTC1-208ENST00000535410 PLCD1P51178 756 aa14.29□□□□□ -0.12
KNTC1-208ENST00000535410 RAB3GAP1Q15042 981 aa14.29□□□□□ -0.12
KNTC1-208ENST00000535410 LCORLQ8N3X6 602 aa14.29□□□□□ -0.12
KNTC1-208ENST00000535410 SLAIN1Q8ND83 568 aa14.29□□□□□ -0.12
KNTC1-208ENST00000535410 EDC3Q96F86 508 aaKnown RBP14.29□□□□□ -0.12
KNTC1-208ENST00000535410 MBD4O95243 580 aa14.28□□□□□ -0.12
KNTC1-208ENST00000535410 CAP1Q01518 475 aa14.28□□□□□ -0.12
KNTC1-208ENST00000535410 IRF5Q13568 498 aa14.28□□□□□ -0.12
KNTC1-208ENST00000535410 CCAR1Q8IX12 1150 aaKnown RBP14.28□□□□□ -0.12
KNTC1-208ENST00000535410 KBTBD3Q8NAB2 608 aa14.28□□□□□ -0.12
KNTC1-208ENST00000535410 GPRC5AQ8NFJ5 357 aa14.28□□□□□ -0.12
KNTC1-208ENST00000535410 SDR42E1Q8WUS8 393 aa14.28□□□□□ -0.12
KNTC1-208ENST00000535410 GCC1Q96CN9 775 aa14.28□□□□□ -0.12
KNTC1-208ENST00000535410 CCDC17Q96LX7 622 aa14.28□□□□□ -0.12
KNTC1-208ENST00000535410 KIAA1683Q9H0B3 1180 aa14.28□□□□□ -0.12
KNTC1-208ENST00000535410 ARMT1Q9H993 441 aa14.28□□□□□ -0.12
KNTC1-208ENST00000535410 PCDHB15Q9Y5E8 787 aa14.28□□□□□ -0.12
KNTC1-208ENST00000535410 USP17L15C9J2P7 530 aa14.27□□□□□ -0.13
KNTC1-208ENST00000535410 USP17L13C9JLJ4 530 aa14.27□□□□□ -0.13
KNTC1-208ENST00000535410 USP17L11C9JVI0 530 aa14.27□□□□□ -0.13
KNTC1-208ENST00000535410 USP17L18D6R9N7 530 aa14.27□□□□□ -0.13
KNTC1-208ENST00000535410 USP17L22D6RA61 530 aa14.27□□□□□ -0.13
KNTC1-208ENST00000535410 USP17L17D6RBQ6 530 aa14.27□□□□□ -0.13
KNTC1-208ENST00000535410 USP17L19D6RCP7 530 aa14.27□□□□□ -0.13
KNTC1-208ENST00000535410 USP17L20D6RJB6 530 aa14.27□□□□□ -0.13
KNTC1-208ENST00000535410 MPHOSPH10O00566 681 aaKnown RBP14.27□□□□□ -0.13
KNTC1-208ENST00000535410 GLRX3O76003 335 aaKnown RBP14.27□□□□□ -0.13
KNTC1-208ENST00000535410 ECM2O94769 699 aaPredicted RBP14.27□□□□□ -0.13
KNTC1-208ENST00000535410 GNAT2P19087 354 aa14.27□□□□□ -0.13
KNTC1-208ENST00000535410 PRKCZQ05513 592 aa14.27□□□□□ -0.13
KNTC1-208ENST00000535410 GABPAQ06546 454 aa14.27□□□□□ -0.13
KNTC1-208ENST00000535410 USP17L24Q0WX57 530 aa14.27□□□□□ -0.13
KNTC1-208ENST00000535410 GIMAP6Q6P9H5 292 aa14.27□□□□□ -0.13
KNTC1-208ENST00000535410 PXYLP1Q8TE99 480 aa14.27□□□□□ -0.13
KNTC1-208ENST00000535410 SH3TC2Q8TF17 1288 aa14.27□□□□□ -0.13
KNTC1-208ENST00000535410 SH2D4AQ9H788 454 aa14.27□□□□□ -0.13
KNTC1-208ENST00000535410 MORF4L1Q9UBU8 362 aa14.27□□□□□ -0.13
KNTC1-208ENST00000535410 SLC4A4Q9Y6R1 1079 aa14.27□□□□□ -0.13
KNTC1-208ENST00000535410 RNF113AO15541 343 aaKnown RBP14.26□□□□□ -0.13
KNTC1-208ENST00000535410 ADCY3O60266 1144 aa14.26□□□□□ -0.13
KNTC1-208ENST00000535410 CTGFP29279 349 aa14.26□□□□□ -0.13
KNTC1-208ENST00000535410 SHMT1P34896 483 aa14.26□□□□□ -0.13
KNTC1-208ENST00000535410 FLT3LGP49771 235 aa14.26□□□□□ -0.13
KNTC1-208ENST00000535410 TMEM179Q6ZVK1 233 aa14.26□□□□□ -0.13
KNTC1-208ENST00000535410 C12orf42Q96LP6 360 aa14.26□□□□□ -0.13
KNTC1-208ENST00000535410 P2RX7Q99572 595 aaKnown RBP14.26□□□□□ -0.13
KNTC1-208ENST00000535410 ZNF287Q9HBT7 754 aa14.26□□□□□ -0.13
KNTC1-208ENST00000535410 POTEFA5A3E0 1075 aa14.25□□□□□ -0.13
KNTC1-208ENST00000535410 USP17L12C9JPN9 530 aa14.25□□□□□ -0.13
KNTC1-208ENST00000535410 USP17L21D6R901 530 aa14.25□□□□□ -0.13
KNTC1-208ENST00000535410 HERVK_113P62684 666 aa14.25□□□□□ -0.13
KNTC1-208ENST00000535410 CCNA1P78396 465 aa14.25□□□□□ -0.13
KNTC1-208ENST00000535410 JAG1P78504 1218 aa14.25□□□□□ -0.13
KNTC1-208ENST00000535410 HDAC1Q13547 482 aaPredicted RBP14.25□□□□□ -0.13
KNTC1-208ENST00000535410 C12orf60Q5U649 245 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms