RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 GDF11O95390 407 aa27.22■■□□□ 1.95
SFSWAP-204ENST00000535399 CETPP11597 493 aa27.22■■□□□ 1.95
SFSWAP-204ENST00000535399 MCMDC2Q4G0Z9 681 aa27.22■■□□□ 1.95
SFSWAP-204ENST00000535399 SLC44A5Q8NCS7 719 aa27.22■■□□□ 1.95
SFSWAP-204ENST00000535399 DYNLL2Q96FJ2 89 aa27.22■■□□□ 1.95
SFSWAP-204ENST00000535399 GINM1Q9NU53 330 aa27.22■■□□□ 1.95
SFSWAP-204ENST00000535399 ARPP21Q9UBL0 812 aaPredicted RBP27.22■■□□□ 1.95
SFSWAP-204ENST00000535399 TAOK2Q9UL54 1235 aa27.22■■□□□ 1.95
SFSWAP-204ENST00000535399 ASNSP08243 561 aa27.21■■□□□ 1.95
SFSWAP-204ENST00000535399 LBX1P52954 281 aa27.21■■□□□ 1.95
SFSWAP-204ENST00000535399 ERICH6BQ5W0A0 696 aa27.21■■□□□ 1.95
SFSWAP-204ENST00000535399 SKAP1Q86WV1 359 aa27.21■■□□□ 1.95
SFSWAP-204ENST00000535399 AMOTL1Q8IY63 956 aa27.21■■□□□ 1.95
SFSWAP-204ENST00000535399 IFNL3Q8IZI9 196 aa27.21■■□□□ 1.95
SFSWAP-204ENST00000535399 ZBTB21Q9ULJ3 1066 aa27.21■■□□□ 1.95
SFSWAP-204ENST00000535399 LAMB1P07942 1786 aa27.2■■□□□ 1.95
SFSWAP-204ENST00000535399 USP17L5A8MUK1 530 aa27.2■■□□□ 1.94
SFSWAP-204ENST00000535399 APPP05067 770 aa27.2■■□□□ 1.94
SFSWAP-204ENST00000535399 MOGSQ13724 837 aa27.2■■□□□ 1.94
SFSWAP-204ENST00000535399 DOCK1Q14185 1865 aa27.2■■□□□ 1.94
SFSWAP-204ENST00000535399 CERKLQ49MI3 558 aaPredicted RBP27.2■■□□□ 1.94
SFSWAP-204ENST00000535399 SWAP70Q9UH65 585 aa27.2■■□□□ 1.94
SFSWAP-204ENST00000535399 ALDH1A1P00352 501 aa27.19■■□□□ 1.94
SFSWAP-204ENST00000535399 GH2P01242 217 aa27.19■■□□□ 1.94
SFSWAP-204ENST00000535399 TDO2P48775 406 aa27.19■■□□□ 1.94
SFSWAP-204ENST00000535399 VPS53Q5VIR6 699 aa27.19■■□□□ 1.94
SFSWAP-204ENST00000535399 ZNF589Q86UQ0 364 aaPredicted RBP27.19■■□□□ 1.94
SFSWAP-204ENST00000535399 CFHR5Q9BXR6 569 aa27.19■■□□□ 1.94
SFSWAP-204ENST00000535399 NACAP1Q9BZK3 213 aa27.19■■□□□ 1.94
SFSWAP-204ENST00000535399 BTBD19C9JJ37 291 aa27.18■■□□□ 1.94
SFSWAP-204ENST00000535399 HIP1O00291 1037 aa27.18■■□□□ 1.94
SFSWAP-204ENST00000535399 OTUD7BQ6GQQ9 843 aa27.18■■□□□ 1.94
SFSWAP-204ENST00000535399 C16orf86Q6ZW13 317 aa27.18■■□□□ 1.94
SFSWAP-204ENST00000535399 FAM43AQ8N2R8 423 aa27.18■■□□□ 1.94
SFSWAP-204ENST00000535399 TBC1D2Q9BYX2 928 aa27.18■■□□□ 1.94
SFSWAP-204ENST00000535399 A0A0G2JLL6 359 aaPredicted RBP27.17■■□□□ 1.94
SFSWAP-204ENST00000535399 TRIM75PA6NK02 468 aa27.17■■□□□ 1.94
SFSWAP-204ENST00000535399 TBC1D8O95759 1140 aa27.17■■□□□ 1.94
SFSWAP-204ENST00000535399 CDK8P49336 464 aa27.17■■□□□ 1.94
SFSWAP-204ENST00000535399 ABCB5Q2M3G0 1257 aa27.17■■□□□ 1.94
SFSWAP-204ENST00000535399 PRRT2Q7Z6L0 340 aaPredicted RBP27.17■■□□□ 1.94
SFSWAP-204ENST00000535399 ZNF280CQ8ND82 737 aa27.17■■□□□ 1.94
SFSWAP-204ENST00000535399 WDR18Q9BV38 432 aa27.17■■□□□ 1.94
SFSWAP-204ENST00000535399 PRDM10Q9NQV6 1147 aa27.17■■□□□ 1.94
SFSWAP-204ENST00000535399 DIAPH3Q9NSV4 1193 aa27.17■■□□□ 1.94
SFSWAP-204ENST00000535399 BAZ2AQ9UIF9 1905 aaKnown RBP27.17■■□□□ 1.94
SFSWAP-204ENST00000535399 MINDY4BA8MYZ0 360 aa27.16■■□□□ 1.94
SFSWAP-204ENST00000535399 SPP2Q13103 211 aa27.16■■□□□ 1.94
SFSWAP-204ENST00000535399 R3HDMLQ9H3Y0 253 aa27.16■■□□□ 1.94
SFSWAP-204ENST00000535399 CCDC171Q6TFL3 1326 aa27.16■■□□□ 1.94
SFSWAP-204ENST00000535399 ROBO3Q96MS0 1386 aa27.15■■□□□ 1.94
SFSWAP-204ENST00000535399 GUCY1A2P33402 732 aa27.15■■□□□ 1.94
SFSWAP-204ENST00000535399 CWC27Q6UX04 472 aaKnown RBP27.15■■□□□ 1.94
SFSWAP-204ENST00000535399 NAPBQ9H115 298 aa27.15■■□□□ 1.94
SFSWAP-204ENST00000535399 AS3MTQ9HBK9 375 aa27.15■■□□□ 1.94
SFSWAP-204ENST00000535399 PPP4R2Q9NY27 417 aa27.15■■□□□ 1.94
SFSWAP-204ENST00000535399 ALX1Q15699 326 aa27.14■■□□□ 1.94
SFSWAP-204ENST00000535399 GPAT2Q6NUI2 795 aa27.14■■□□□ 1.94
SFSWAP-204ENST00000535399 ZCCHC17Q9NP64 241 aaKnown RBP27.14■■□□□ 1.94
SFSWAP-204ENST00000535399 FASTKD5Q7L8L6 764 aaKnown RBP27.13■■□□□ 1.93
SFSWAP-204ENST00000535399 ANKRD23Q86SG2 305 aa27.13■■□□□ 1.93
SFSWAP-204ENST00000535399 CABP5Q9NP86 173 aa27.13■■□□□ 1.93
SFSWAP-204ENST00000535399 PHIPQ8WWQ0 1821 aa27.13■■□□□ 1.93
SFSWAP-204ENST00000535399 HSPD1P10809 573 aaKnown RBP27.12■■□□□ 1.93
SFSWAP-204ENST00000535399 AKR1B1P15121 316 aa27.12■■□□□ 1.93
SFSWAP-204ENST00000535399 CRHR2Q13324 411 aa27.12■■□□□ 1.93
SFSWAP-204ENST00000535399 CCDC17Q96LX7 622 aa27.12■■□□□ 1.93
SFSWAP-204ENST00000535399 MFAP1P55081 439 aaKnown RBP27.11■■□□□ 1.93
SFSWAP-204ENST00000535399 SEPT2Q15019 361 aa27.11■■□□□ 1.93
SFSWAP-204ENST00000535399 RAB3GAP1Q15042 981 aa27.11■■□□□ 1.93
SFSWAP-204ENST00000535399 SH3D19Q5HYK7 790 aa27.11■■□□□ 1.93
SFSWAP-204ENST00000535399 STK11IPQ8N1F8 1099 aa27.11■■□□□ 1.93
SFSWAP-204ENST00000535399 CHMLP26374 656 aa27.1■■□□□ 1.93
SFSWAP-204ENST00000535399 HMGCS2P54868 508 aa27.1■■□□□ 1.93
SFSWAP-204ENST00000535399 BACE1P56817 501 aa27.1■■□□□ 1.93
SFSWAP-204ENST00000535399 PPARAQ07869 468 aa27.1■■□□□ 1.93
SFSWAP-204ENST00000535399 MTMR2Q13614 643 aa27.1■■□□□ 1.93
SFSWAP-204ENST00000535399 TAF1CQ15572 869 aaPredicted RBP27.1■■□□□ 1.93
SFSWAP-204ENST00000535399 NOM1Q5C9Z4 860 aaKnown RBP27.1■■□□□ 1.93
SFSWAP-204ENST00000535399 GADL1Q6ZQY3 521 aa27.1■■□□□ 1.93
SFSWAP-204ENST00000535399 TMEM179Q6ZVK1 233 aa27.1■■□□□ 1.93
SFSWAP-204ENST00000535399 IL25Q9H293 177 aa27.1■■□□□ 1.93
SFSWAP-204ENST00000535399 ATAD5Q96QE3 1844 aa27.1■■□□□ 1.93
SFSWAP-204ENST00000535399 GPR25O00155 361 aa27.09■■□□□ 1.93
SFSWAP-204ENST00000535399 PDHXO00330 501 aa27.09■■□□□ 1.93
SFSWAP-204ENST00000535399 MPHOSPH10O00566 681 aaKnown RBP27.09■■□□□ 1.93
SFSWAP-204ENST00000535399 FGAP02671 866 aa27.09■■□□□ 1.93
SFSWAP-204ENST00000535399 RASA1P20936 1047 aa27.09■■□□□ 1.93
SFSWAP-204ENST00000535399 PROCA1Q8NCQ7 364 aaPredicted RBP27.09■■□□□ 1.93
SFSWAP-204ENST00000535399 USP17L10C9JJH3 530 aa27.08■■□□□ 1.93
SFSWAP-204ENST00000535399 DGKZQ13574 1117 aa27.08■■□□□ 1.93
SFSWAP-204ENST00000535399 COL13A1Q5TAT6 717 aaPredicted RBP27.08■■□□□ 1.93
SFSWAP-204ENST00000535399 ACER1Q8TDN7 264 aa27.08■■□□□ 1.93
SFSWAP-204ENST00000535399 ZFYVE28Q9HCC9 887 aa27.08■■□□□ 1.93
SFSWAP-204ENST00000535399 AGTPBP1Q9UPW5 1226 aa27.08■■□□□ 1.93
SFSWAP-204ENST00000535399 C19orf81C9J6K1 198 aa27.07■■□□□ 1.92
SFSWAP-204ENST00000535399 MKNK2Q9HBH9 465 aa27.07■■□□□ 1.92
SFSWAP-204ENST00000535399 ANAPC4Q9UJX5 808 aa27.07■■□□□ 1.92
SFSWAP-204ENST00000535399 ZMYM6O95789 1325 aa27.07■■□□□ 1.92
SFSWAP-204ENST00000535399 BMP2KLQ5H9B9 411 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms