RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 MSS51Q4VC12 460 aa13.1□□□□□ -0.31
TNC-209ENST00000534839 RETREG3Q86VR2 466 aa13.1□□□□□ -0.31
TNC-209ENST00000534839 CERS5Q8N5B7 392 aa13.1□□□□□ -0.31
TNC-209ENST00000534839 ZKSCAN4Q969J2 545 aaPredicted RBP13.1□□□□□ -0.31
TNC-209ENST00000534839 F8W031 263 aaPredicted RBP13.09□□□□□ -0.31
TNC-209ENST00000534839 LILRB3O75022 631 aa13.09□□□□□ -0.31
TNC-209ENST00000534839 HMGCRP04035 888 aa13.09□□□□□ -0.31
TNC-209ENST00000534839 TFF2Q03403 129 aa13.09□□□□□ -0.31
TNC-209ENST00000534839 AIMP1Q12904 312 aaKnown RBP13.09□□□□□ -0.31
TNC-209ENST00000534839 MTMR2Q13614 643 aa13.09□□□□□ -0.31
TNC-209ENST00000534839 COPS6Q7L5N1 327 aa13.09□□□□□ -0.31
TNC-209ENST00000534839 PARK7Q99497 189 aaKnown RBP13.09□□□□□ -0.31
TNC-209ENST00000534839 CXXC1Q9P0U4 656 aaPredicted RBP13.09□□□□□ -0.31
TNC-209ENST00000534839 CFAP99D6REC4 459 aa13.08□□□□□ -0.32
TNC-209ENST00000534839 TUSC1Q2TAM9 212 aa13.08□□□□□ -0.32
TNC-209ENST00000534839 FBXL18Q96ME1 805 aa13.08□□□□□ -0.32
TNC-209ENST00000534839 TMEM39BQ9GZU3 492 aa13.08□□□□□ -0.32
TNC-209ENST00000534839 PRKAG2Q9UGJ0 569 aa13.08□□□□□ -0.32
TNC-209ENST00000534839 IRS4O14654 1257 aaPredicted RBP13.07□□□□□ -0.32
TNC-209ENST00000534839 PRKAR2BP31323 418 aa13.07□□□□□ -0.32
TNC-209ENST00000534839 ADGRE1Q14246 886 aa13.07□□□□□ -0.32
TNC-209ENST00000534839 PLA2G2CQ5R387 149 aa13.07□□□□□ -0.32
TNC-209ENST00000534839 PRR7Q8TB68 274 aa13.07□□□□□ -0.32
TNC-209ENST00000534839 BADQ92934 168 aa13.07□□□□□ -0.32
TNC-209ENST00000534839 EMID1Q96A84 441 aaPredicted RBP13.07□□□□□ -0.32
TNC-209ENST00000534839 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.07□□□□□ -0.32
TNC-209ENST00000534839 PRDM12Q9H4Q4 367 aa13.07□□□□□ -0.32
TNC-209ENST00000534839 PRR33A8MZF0 331 aa13.06□□□□□ -0.32
TNC-209ENST00000534839 ZEB1P37275 1124 aaPredicted RBP13.06□□□□□ -0.32
TNC-209ENST00000534839 MMP16P51512 607 aa13.06□□□□□ -0.32
TNC-209ENST00000534839 PPATQ06203 517 aa13.06□□□□□ -0.32
TNC-209ENST00000534839 TNFAIP1Q13829 316 aa13.06□□□□□ -0.32
TNC-209ENST00000534839 GPAT2Q6NUI2 795 aa13.06□□□□□ -0.32
TNC-209ENST00000534839 XAGE3Q8WTP9 111 aa13.06□□□□□ -0.32
TNC-209ENST00000534839 COA7Q96BR5 231 aa13.06□□□□□ -0.32
TNC-209ENST00000534839 WRNIP1Q96S55 665 aa13.06□□□□□ -0.32
TNC-209ENST00000534839 ZNF70Q9UC06 446 aaPredicted RBP13.06□□□□□ -0.32
TNC-209ENST00000534839 DNAH12Q6ZR08 3092 aa13.06□□□□□ -0.32
TNC-209ENST00000534839 PI4K2BG5E9Z4 385 aa13.05□□□□□ -0.32
TNC-209ENST00000534839 DXOO77932 396 aaKnown RBP13.05□□□□□ -0.32
TNC-209ENST00000534839 GGCXP38435 758 aa13.05□□□□□ -0.32
TNC-209ENST00000534839 CCT4P50991 539 aaKnown RBP13.05□□□□□ -0.32
TNC-209ENST00000534839 CCDC85AQ96PX6 553 aaPredicted RBP13.05□□□□□ -0.32
TNC-209ENST00000534839 TCP10L2B9ZVM9 353 aa13.04□□□□□ -0.32
TNC-209ENST00000534839 EIF2S2P20042 333 aaKnown RBP13.04□□□□□ -0.32
TNC-209ENST00000534839 KLRK1P26718 216 aa13.04□□□□□ -0.32
TNC-209ENST00000534839 RBM5P52756 815 aaKnown RBP eCLIP13.04□□□□□ -0.32
TNC-209ENST00000534839 TIFAQ96CG3 184 aa13.04□□□□□ -0.32
TNC-209ENST00000534839 RNPC3Q96LT9 517 aaKnown RBP13.04□□□□□ -0.32
TNC-209ENST00000534839 ISCA1Q9BUE6 129 aa13.04□□□□□ -0.32
TNC-209ENST00000534839 SENP6Q9GZR1 1112 aaPredicted RBP13.04□□□□□ -0.32
TNC-209ENST00000534839 TDRD3Q9H7E2 651 aaKnown RBP13.04□□□□□ -0.32
TNC-209ENST00000534839 KCNH4Q9UQ05 1017 aa13.04□□□□□ -0.32
TNC-209ENST00000534839 ARAP2Q8WZ64 1704 aa13.04□□□□□ -0.32
TNC-209ENST00000534839 USP34Q70CQ2 3546 aa13.03□□□□□ -0.32
TNC-209ENST00000534839 ATP5J2-PTCD1G3V325 749 aa13.03□□□□□ -0.32
TNC-209ENST00000534839 KRT37O76014 449 aa13.03□□□□□ -0.32
TNC-209ENST00000534839 IGFBP4P22692 258 aa13.03□□□□□ -0.32
TNC-209ENST00000534839 MAP3K21Q5TCX8 1036 aa13.03□□□□□ -0.32
TNC-209ENST00000534839 ANKRD18AQ8IVF6 992 aa13.03□□□□□ -0.32
TNC-209ENST00000534839 GOPCQ9HD26 462 aa13.03□□□□□ -0.32
TNC-209ENST00000534839 JUNDP17535 347 aa13.02□□□□□ -0.33
TNC-209ENST00000534839 RTP1P59025 263 aa13.02□□□□□ -0.33
TNC-209ENST00000534839 AAK1Q2M2I8 961 aa13.02□□□□□ -0.33
TNC-209ENST00000534839 PNISRQ8TF01 805 aaKnown RBP13.02□□□□□ -0.33
TNC-209ENST00000534839 TRIB2Q92519 343 aa13.02□□□□□ -0.33
TNC-209ENST00000534839 UIMC1Q96RL1 719 aa13.02□□□□□ -0.33
TNC-209ENST00000534839 MINPP1Q9UNW1 487 aa13.02□□□□□ -0.33
TNC-209ENST00000534839 FCF1Q9Y324 198 aaKnown RBP13.02□□□□□ -0.33
TNC-209ENST00000534839 REV3LO60673 3130 aa13.02□□□□□ -0.33
TNC-209ENST00000534839 WDFY4Q6ZS81 3184 aa13.02□□□□□ -0.33
TNC-209ENST00000534839 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.01□□□□□ -0.33
TNC-209ENST00000534839 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.01□□□□□ -0.33
TNC-209ENST00000534839 HTATSF1O43719 755 aaKnown RBP13.01□□□□□ -0.33
TNC-209ENST00000534839 EPHB4P54760 987 aa13.01□□□□□ -0.33
TNC-209ENST00000534839 CCDC152Q4G0S7 254 aa13.01□□□□□ -0.33
TNC-209ENST00000534839 PRDM5Q9NQX1 630 aaPredicted RBP13.01□□□□□ -0.33
TNC-209ENST00000534839 GJD2Q9UKL4 321 aa13.01□□□□□ -0.33
TNC-209ENST00000534839 KCNH6Q9H252 994 aa13□□□□□ -0.33
TNC-209ENST00000534839 CD209Q9NNX6 404 aa13□□□□□ -0.33
TNC-209ENST00000534839 ATP11BQ9Y2G3 1177 aa13□□□□□ -0.33
TNC-209ENST00000534839 DOCK3Q8IZD9 2030 aa13□□□□□ -0.33
TNC-209ENST00000534839 INPP5BP32019 993 aa12.99□□□□□ -0.33
TNC-209ENST00000534839 TNNI2P48788 182 aa12.99□□□□□ -0.33
TNC-209ENST00000534839 PCMTD1Q96MG8 357 aaPredicted RBP12.99□□□□□ -0.33
TNC-209ENST00000534839 CD320Q9NPF0 282 aa12.99□□□□□ -0.33
TNC-209ENST00000534839 KNSTRNQ9Y448 316 aa12.99□□□□□ -0.33
TNC-209ENST00000534839 CCND3P30281 292 aaPredicted RBP12.98□□□□□ -0.33
TNC-209ENST00000534839 LIAT1Q6ZQX7 453 aa12.98□□□□□ -0.33
TNC-209ENST00000534839 ANKRD13CQ8N6S4 541 aa12.98□□□□□ -0.33
TNC-209ENST00000534839 LEMD3Q9Y2U8 911 aa12.98□□□□□ -0.33
TNC-209ENST00000534839 CFAP54Q96N23 3096 aa12.98□□□□□ -0.33
TNC-209ENST00000534839 LRRC37A2A6NM11 1700 aa12.97□□□□□ -0.33
TNC-209ENST00000534839 TRIM43BA6NCK2 446 aa12.97□□□□□ -0.33
TNC-209ENST00000534839 ERC2O15083 957 aa12.97□□□□□ -0.33
TNC-209ENST00000534839 SH3RF1Q7Z6J0 888 aa12.97□□□□□ -0.33
TNC-209ENST00000534839 TRIM43Q96BQ3 446 aaPredicted RBP12.97□□□□□ -0.33
TNC-209ENST00000534839 PRKD2Q9BZL6 878 aa12.97□□□□□ -0.33
TNC-209ENST00000534839 JAG2Q9Y219 1238 aa12.97□□□□□ -0.33
TNC-209ENST00000534839 ZFHX4Q86UP3 3567 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms