RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 ZFYVE28Q9HCC9 887 aa15.49■□□□□ 0.07
CCS-209ENST00000534763 HELLSQ9NRZ9 838 aa15.49■□□□□ 0.07
CCS-209ENST00000534763 USP17L12C9JPN9 530 aa15.48■□□□□ 0.07
CCS-209ENST00000534763 USP17L21D6R901 530 aa15.48■□□□□ 0.07
CCS-209ENST00000534763 M0R2C6 588 aa15.48■□□□□ 0.07
CCS-209ENST00000534763 CRHR2Q13324 411 aa15.48■□□□□ 0.07
CCS-209ENST00000534763 SH3D19Q5HYK7 790 aa15.48■□□□□ 0.07
CCS-209ENST00000534763 CTR9Q6PD62 1173 aa15.48■□□□□ 0.07
CCS-209ENST00000534763 PROCA1Q8NCQ7 364 aaPredicted RBP15.48■□□□□ 0.07
CCS-209ENST00000534763 NACAP1Q9BZK3 213 aa15.48■□□□□ 0.07
CCS-209ENST00000534763 ZBTB21Q9ULJ3 1066 aa15.48■□□□□ 0.07
CCS-209ENST00000534763 NAV1Q8NEY1 1877 aa15.48■□□□□ 0.07
CCS-209ENST00000534763 MYH1P12882 1939 aa15.47■□□□□ 0.07
CCS-209ENST00000534763 TRIM6-TRIM34B2RNG4 842 aa15.47■□□□□ 0.07
CCS-209ENST00000534763 C19orf81C9J6K1 198 aa15.47■□□□□ 0.07
CCS-209ENST00000534763 SPP2Q13103 211 aa15.47■□□□□ 0.07
CCS-209ENST00000534763 TAF1CQ15572 869 aaPredicted RBP15.47■□□□□ 0.07
CCS-209ENST00000534763 SLC4A8Q2Y0W8 1093 aa15.47■□□□□ 0.07
CCS-209ENST00000534763 GPAT2Q6NUI2 795 aa15.47■□□□□ 0.07
CCS-209ENST00000534763 ZNF296Q8WUU4 475 aaPredicted RBP15.47■□□□□ 0.07
CCS-209ENST00000534763 CCDC17Q96LX7 622 aa15.47■□□□□ 0.07
CCS-209ENST00000534763 TRIM75PA6NK02 468 aa15.46■□□□□ 0.07
CCS-209ENST00000534763 HIP1O00291 1037 aa15.46■□□□□ 0.07
CCS-209ENST00000534763 PDHXO00330 501 aa15.46■□□□□ 0.07
CCS-209ENST00000534763 TLR2O60603 784 aa15.46■□□□□ 0.07
CCS-209ENST00000534763 FKTNO75072 461 aa15.46■□□□□ 0.07
CCS-209ENST00000534763 GH2P01242 217 aa15.46■□□□□ 0.07
CCS-209ENST00000534763 PDE4AP27815 886 aa15.46■□□□□ 0.07
CCS-209ENST00000534763 BACE1P56817 501 aa15.46■□□□□ 0.07
CCS-209ENST00000534763 JAG1P78504 1218 aa15.46■□□□□ 0.07
CCS-209ENST00000534763 ABCB5Q2M3G0 1257 aa15.46■□□□□ 0.07
CCS-209ENST00000534763 C16orf86Q6ZW13 317 aa15.46■□□□□ 0.07
CCS-209ENST00000534763 SEC62Q99442 399 aaKnown RBP15.46■□□□□ 0.07
CCS-209ENST00000534763 R3HDMLQ9H3Y0 253 aa15.46■□□□□ 0.07
CCS-209ENST00000534763 CABP5Q9NP86 173 aa15.46■□□□□ 0.07
CCS-209ENST00000534763 ROBO3Q96MS0 1386 aa15.46■□□□□ 0.07
CCS-209ENST00000534763 GDF11O95390 407 aa15.45■□□□□ 0.06
CCS-209ENST00000534763 CYP2D6P10635 497 aa15.45■□□□□ 0.06
CCS-209ENST00000534763 MCMDC2Q4G0Z9 681 aa15.45■□□□□ 0.06
CCS-209ENST00000534763 CENPQQ7L2Z9 268 aaPredicted RBP15.45■□□□□ 0.06
CCS-209ENST00000534763 IFNL3Q8IZI9 196 aa15.45■□□□□ 0.06
CCS-209ENST00000534763 TNS4Q8IZW8 715 aa15.45■□□□□ 0.06
CCS-209ENST00000534763 RILPL2Q969X0 211 aa15.45■□□□□ 0.06
CCS-209ENST00000534763 ZNF287Q9HBT7 754 aa15.45■□□□□ 0.06
CCS-209ENST00000534763 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.45■□□□□ 0.06
CCS-209ENST00000534763 AGTPBP1Q9UPW5 1226 aa15.45■□□□□ 0.06
CCS-209ENST00000534763 PHIPQ8WWQ0 1821 aa15.45■□□□□ 0.06
CCS-209ENST00000534763 USP17L10C9JJH3 530 aa15.44■□□□□ 0.06
CCS-209ENST00000534763 APPP05067 770 aa15.44■□□□□ 0.06
CCS-209ENST00000534763 SDSP20132 328 aa15.44■□□□□ 0.06
CCS-209ENST00000534763 TDO2P48775 406 aa15.44■□□□□ 0.06
CCS-209ENST00000534763 CDK8P49336 464 aa15.44■□□□□ 0.06
CCS-209ENST00000534763 MFAP1P55081 439 aaKnown RBP15.44■□□□□ 0.06
CCS-209ENST00000534763 PABPC4Q13310 644 aaKnown RBP eCLIP15.44■□□□□ 0.06
CCS-209ENST00000534763 PKN2Q16513 984 aaKnown RBP15.44■□□□□ 0.06
CCS-209ENST00000534763 TMEM179Q6ZVK1 233 aa15.44■□□□□ 0.06
CCS-209ENST00000534763 PARK7Q99497 189 aaKnown RBP15.44■□□□□ 0.06
CCS-209ENST00000534763 EPB41L4AQ9HCS5 686 aaPredicted RBP15.44■□□□□ 0.06
CCS-209ENST00000534763 CENPBP07199 599 aaPredicted RBP15.43■□□□□ 0.06
CCS-209ENST00000534763 USP14P54578 494 aa15.43■□□□□ 0.06
CCS-209ENST00000534763 SP3Q02447 781 aa15.43■□□□□ 0.06
CCS-209ENST00000534763 EVX2Q03828 476 aa15.43■□□□□ 0.06
CCS-209ENST00000534763 ALX1Q15699 326 aa15.43■□□□□ 0.06
CCS-209ENST00000534763 TTC22Q5TAA0 569 aa15.43■□□□□ 0.06
CCS-209ENST00000534763 GADL1Q6ZQY3 521 aa15.43■□□□□ 0.06
CCS-209ENST00000534763 CTU1Q7Z7A3 348 aaKnown RBP15.43■□□□□ 0.06
CCS-209ENST00000534763 CCDC84Q86UT8 332 aaPredicted RBP15.43■□□□□ 0.06
CCS-209ENST00000534763 DYNLL2Q96FJ2 89 aa15.43■□□□□ 0.06
CCS-209ENST00000534763 ERO1AQ96HE7 468 aa15.43■□□□□ 0.06
CCS-209ENST00000534763 C12orf42Q96LP6 360 aa15.43■□□□□ 0.06
CCS-209ENST00000534763 KIAA1683Q9H0B3 1180 aa15.43■□□□□ 0.06
CCS-209ENST00000534763 TMOD4Q9NZQ9 345 aa15.43■□□□□ 0.06
CCS-209ENST00000534763 PNMA3Q9UL41 463 aa15.43■□□□□ 0.06
CCS-209ENST00000534763 ZMYM6O95789 1325 aa15.43■□□□□ 0.06
CCS-209ENST00000534763 ADGRA2Q96PE1 1338 aa15.43■□□□□ 0.06
CCS-209ENST00000534763 CYP2D7A0A087X1C5 515 aa15.42■□□□□ 0.06
CCS-209ENST00000534763 HOXA7P31268 230 aaPredicted RBP15.42■□□□□ 0.06
CCS-209ENST00000534763 GUCY1A2P33402 732 aa15.42■□□□□ 0.06
CCS-209ENST00000534763 HMGCS2P54868 508 aa15.42■□□□□ 0.06
CCS-209ENST00000534763 MTMR2Q13614 643 aa15.42■□□□□ 0.06
CCS-209ENST00000534763 RAB3GAP1Q15042 981 aa15.42■□□□□ 0.06
CCS-209ENST00000534763 ARHGEF6Q15052 776 aa15.42■□□□□ 0.06
CCS-209ENST00000534763 SHROOM1Q2M3G4 852 aaPredicted RBP15.42■□□□□ 0.06
CCS-209ENST00000534763 C17orf99Q6UX52 265 aa15.42■□□□□ 0.06
CCS-209ENST00000534763 SLC44A5Q8NCS7 719 aa15.42■□□□□ 0.06
CCS-209ENST00000534763 FAM227BQ96M60 508 aa15.42■□□□□ 0.06
CCS-209ENST00000534763 NAPBQ9H115 298 aa15.42■□□□□ 0.06
CCS-209ENST00000534763 ATAD5Q96QE3 1844 aa15.42■□□□□ 0.06
CCS-209ENST00000534763 A0A0D9SFI3 127 aa15.41■□□□□ 0.06
CCS-209ENST00000534763 FOXP2O15409 715 aa15.41■□□□□ 0.06
CCS-209ENST00000534763 NEFLP07196 543 aa15.41■□□□□ 0.06
CCS-209ENST00000534763 SLC3A2P08195 630 aaKnown RBP15.41■□□□□ 0.06
CCS-209ENST00000534763 NMIQ13287 307 aaPredicted RBP15.41■□□□□ 0.06
CCS-209ENST00000534763 ERICH6BQ5W0A0 696 aa15.41■□□□□ 0.06
CCS-209ENST00000534763 USP17L2Q6R6M4 530 aa15.41■□□□□ 0.06
CCS-209ENST00000534763 CCDC171Q6TFL3 1326 aa15.41■□□□□ 0.06
CCS-209ENST00000534763 LOC285556D6RIA3 1793 aa15.4■□□□□ 0.06
CCS-209ENST00000534763 MINDY4BA8MYZ0 360 aa15.4■□□□□ 0.06
CCS-209ENST00000534763 GNRH1P01148 92 aa15.4■□□□□ 0.06
CCS-209ENST00000534763 GSPT1P15170 499 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms