RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 SIPA1L1O43166 1804 aa17.02■□□□□ 0.31
CCDC84-208ENST00000534656 CEP290O15078 2479 aa17.02■□□□□ 0.31
CCDC84-208ENST00000534656 DOCK3Q8IZD9 2030 aa17.01■□□□□ 0.31
CCDC84-208ENST00000534656 USP17L10C9JJH3 530 aa17.01■□□□□ 0.31
CCDC84-208ENST00000534656 ZAP70P43403 619 aa17.01■□□□□ 0.31
CCDC84-208ENST00000534656 TRIM32Q13049 653 aa17.01■□□□□ 0.31
CCDC84-208ENST00000534656 ZKSCAN2Q63HK3 967 aa17.01■□□□□ 0.31
CCDC84-208ENST00000534656 TRIM34Q9BYJ4 488 aa17.01■□□□□ 0.31
CCDC84-208ENST00000534656 MAST2Q6P0Q8 1798 aa17.01■□□□□ 0.31
CCDC84-208ENST00000534656 SZT2Q5T011 3432 aa17.01■□□□□ 0.31
CCDC84-208ENST00000534656 TRIOBPQ9H2D6 2365 aa17■□□□□ 0.31
CCDC84-208ENST00000534656 SURF6O75683 361 aaKnown RBP17■□□□□ 0.31
CCDC84-208ENST00000534656 GDF11O95390 407 aa17■□□□□ 0.31
CCDC84-208ENST00000534656 HERVK_113P62684 666 aa17■□□□□ 0.31
CCDC84-208ENST00000534656 SHROOM1Q2M3G4 852 aaPredicted RBP17■□□□□ 0.31
CCDC84-208ENST00000534656 GPRC5AQ8NFJ5 357 aa17■□□□□ 0.31
CCDC84-208ENST00000534656 TRIB2Q92519 343 aa17■□□□□ 0.31
CCDC84-208ENST00000534656 TXNRD2Q9NNW7 524 aa17■□□□□ 0.31
CCDC84-208ENST00000534656 PIH1D3Q9NQM4 214 aaKnown RBP17■□□□□ 0.31
CCDC84-208ENST00000534656 STAP2Q9UGK3 403 aa17■□□□□ 0.31
CCDC84-208ENST00000534656 PEX10O60683 326 aa16.99■□□□□ 0.31
CCDC84-208ENST00000534656 HLA-DOAP06340 250 aa16.99■□□□□ 0.31
CCDC84-208ENST00000534656 CYP2B6P20813 491 aa16.99■□□□□ 0.31
CCDC84-208ENST00000534656 NUDT12Q9BQG2 462 aa16.99■□□□□ 0.31
CCDC84-208ENST00000534656 NBPF3Q9H094 633 aa16.99■□□□□ 0.31
CCDC84-208ENST00000534656 RBPJLQ9UBG7 517 aa16.99■□□□□ 0.31
CCDC84-208ENST00000534656 SAP30BPQ9UHR5 308 aaKnown RBP16.99■□□□□ 0.31
CCDC84-208ENST00000534656 ZBTB21Q9ULJ3 1066 aa16.99■□□□□ 0.31
CCDC84-208ENST00000534656 NOP58Q9Y2X3 529 aaKnown RBP16.99■□□□□ 0.31
CCDC84-208ENST00000534656 RANBP2P49792 3224 aaKnown RBP16.99■□□□□ 0.31
CCDC84-208ENST00000534656 PLXNB2O15031 1838 aa16.98■□□□□ 0.31
CCDC84-208ENST00000534656 XRCC5P13010 732 aaKnown RBP16.98■□□□□ 0.31
CCDC84-208ENST00000534656 CYP7A1P22680 504 aa16.98■□□□□ 0.31
CCDC84-208ENST00000534656 MAPK4P31152 587 aa16.98■□□□□ 0.31
CCDC84-208ENST00000534656 MNX1P50219 401 aaPredicted RBP16.98■□□□□ 0.31
CCDC84-208ENST00000534656 DYNLL1P63167 89 aaKnown RBP16.98■□□□□ 0.31
CCDC84-208ENST00000534656 MAP3K21Q5TCX8 1036 aa16.98■□□□□ 0.31
CCDC84-208ENST00000534656 SOCS4Q8WXH5 440 aa16.98■□□□□ 0.31
CCDC84-208ENST00000534656 DBNLQ9UJU6 430 aaKnown RBP16.98■□□□□ 0.31
CCDC84-208ENST00000534656 OGDHLQ9ULD0 1010 aa16.98■□□□□ 0.31
CCDC84-208ENST00000534656 FOCADQ5VW36 1801 aa16.98■□□□□ 0.31
CCDC84-208ENST00000534656 CDK5RAP2Q96SN8 1893 aa16.97■□□□□ 0.31
CCDC84-208ENST00000534656 ERVK-9P63128 1117 aa16.97■□□□□ 0.31
CCDC84-208ENST00000534656 ERVK-24P63145 666 aa16.97■□□□□ 0.31
CCDC84-208ENST00000534656 Q3C1V9 767 aa16.97■□□□□ 0.31
CCDC84-208ENST00000534656 TRMT44Q8IYL2 757 aaKnown RBP16.97■□□□□ 0.31
CCDC84-208ENST00000534656 C7orf61Q8IZ16 206 aa16.97■□□□□ 0.31
CCDC84-208ENST00000534656 GTF3C2Q8WUA4 911 aaPredicted RBP16.97■□□□□ 0.31
CCDC84-208ENST00000534656 GDF15Q99988 308 aa16.97■□□□□ 0.31
CCDC84-208ENST00000534656 CCDC8Q9H0W5 538 aaPredicted RBP16.97■□□□□ 0.31
CCDC84-208ENST00000534656 C11orf49Q9H6J7 331 aa16.97■□□□□ 0.31
CCDC84-208ENST00000534656 C1orf115Q9H7X2 142 aa16.97■□□□□ 0.31
CCDC84-208ENST00000534656 EMILIN3Q9NT22 766 aa16.97■□□□□ 0.31
CCDC84-208ENST00000534656 TLR7Q9NYK1 1049 aaKnown RBP16.97■□□□□ 0.31
CCDC84-208ENST00000534656 ALPK3Q96L96 1907 aa16.96■□□□□ 0.31
CCDC84-208ENST00000534656 SOX1O00570 391 aaPredicted RBP16.96■□□□□ 0.31
CCDC84-208ENST00000534656 PRKAR2AP13861 404 aaKnown RBP16.96■□□□□ 0.31
CCDC84-208ENST00000534656 BMP8BP34820 402 aa16.96■□□□□ 0.31
CCDC84-208ENST00000534656 PDE3AQ14432 1141 aa16.96■□□□□ 0.31
CCDC84-208ENST00000534656 USP17L2Q6R6M4 530 aa16.96■□□□□ 0.31
CCDC84-208ENST00000534656 CERS3Q8IU89 383 aa16.96■□□□□ 0.31
CCDC84-208ENST00000534656 USP6NLQ92738 828 aa16.96■□□□□ 0.31
CCDC84-208ENST00000534656 EAF2Q96CJ1 260 aaPredicted RBP16.96■□□□□ 0.31
CCDC84-208ENST00000534656 IDH1O75874 414 aaKnown RBP16.95■□□□□ 0.3
CCDC84-208ENST00000534656 GH2P01242 217 aa16.95■□□□□ 0.3
CCDC84-208ENST00000534656 MORN1Q5T089 497 aa16.95■□□□□ 0.3
CCDC84-208ENST00000534656 TATDN1Q6P1N9 297 aa16.95■□□□□ 0.3
CCDC84-208ENST00000534656 POTEEQ6S8J3 1075 aa16.95■□□□□ 0.3
CCDC84-208ENST00000534656 GPR142Q7Z601 462 aa16.95■□□□□ 0.3
CCDC84-208ENST00000534656 CCAR1Q8IX12 1150 aaKnown RBP16.95■□□□□ 0.3
CCDC84-208ENST00000534656 MIGA1Q8NAN2 632 aa16.95■□□□□ 0.3
CCDC84-208ENST00000534656 PAGR1Q9BTK6 254 aa16.95■□□□□ 0.3
CCDC84-208ENST00000534656 PORCNQ9H237 461 aa16.95■□□□□ 0.3
CCDC84-208ENST00000534656 ZMYND8Q9ULU4 1186 aaPredicted RBP16.95■□□□□ 0.3
CCDC84-208ENST00000534656 MYO5AQ9Y4I1 1855 aaKnown RBP16.95■□□□□ 0.3
CCDC84-208ENST00000534656 ZKSCAN1P17029 563 aaPredicted RBP16.94■□□□□ 0.3
CCDC84-208ENST00000534656 RGS2P41220 211 aa16.94■□□□□ 0.3
CCDC84-208ENST00000534656 USP5P45974 858 aa16.94■□□□□ 0.3
CCDC84-208ENST00000534656 CACNB2Q08289 660 aaPredicted RBP16.94■□□□□ 0.3
CCDC84-208ENST00000534656 PLEKHH3Q7Z736 793 aa16.94■□□□□ 0.3
CCDC84-208ENST00000534656 FTSJ3Q8IY81 847 aaKnown RBP16.94■□□□□ 0.3
CCDC84-208ENST00000534656 LRCH3Q96II8 777 aa16.94■□□□□ 0.3
CCDC84-208ENST00000534656 C12orf42Q96LP6 360 aa16.94■□□□□ 0.3
CCDC84-208ENST00000534656 DDX60LQ5H9U9 1706 aaKnown RBP16.93■□□□□ 0.3
CCDC84-208ENST00000534656 TMED8Q6PL24 325 aaPredicted RBP16.93■□□□□ 0.3
CCDC84-208ENST00000534656 ITPRIPQ8IWB1 547 aa16.93■□□□□ 0.3
CCDC84-208ENST00000534656 MAGEB6Q8N7X4 407 aa16.93■□□□□ 0.3
CCDC84-208ENST00000534656 EHD4Q9H223 541 aa16.93■□□□□ 0.3
CCDC84-208ENST00000534656 SERPINB13Q9UIV8 391 aa16.93■□□□□ 0.3
CCDC84-208ENST00000534656 RABGAP1Q9Y3P9 1069 aa16.93■□□□□ 0.3
CCDC84-208ENST00000534656 USP17L15C9J2P7 530 aa16.92■□□□□ 0.3
CCDC84-208ENST00000534656 USP17L13C9JLJ4 530 aa16.92■□□□□ 0.3
CCDC84-208ENST00000534656 USP17L11C9JVI0 530 aa16.92■□□□□ 0.3
CCDC84-208ENST00000534656 USP17L18D6R9N7 530 aa16.92■□□□□ 0.3
CCDC84-208ENST00000534656 USP17L22D6RA61 530 aa16.92■□□□□ 0.3
CCDC84-208ENST00000534656 USP17L17D6RBQ6 530 aa16.92■□□□□ 0.3
CCDC84-208ENST00000534656 USP17L19D6RCP7 530 aa16.92■□□□□ 0.3
CCDC84-208ENST00000534656 USP17L20D6RJB6 530 aa16.92■□□□□ 0.3
CCDC84-208ENST00000534656 SYN1P17600 705 aa16.92■□□□□ 0.3
CCDC84-208ENST00000534656 USP17L24Q0WX57 530 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms