RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 EPS15P42566 896 aa19.95■□□□□ 0.78
VPS51-216ENST00000534591 HTRA3P83110 453 aa19.95■□□□□ 0.78
VPS51-216ENST00000534591 SENP2Q9HC62 589 aa19.95■□□□□ 0.78
VPS51-216ENST00000534591 USP40Q9NVE5 1235 aa19.95■□□□□ 0.78
VPS51-216ENST00000534591 TNKSO95271 1327 aa19.94■□□□□ 0.78
VPS51-216ENST00000534591 VPS37CA5D8V6 355 aaPredicted RBP19.94■□□□□ 0.78
VPS51-216ENST00000534591 PRDM1O75626 825 aa19.94■□□□□ 0.78
VPS51-216ENST00000534591 CCDC178Q5BJE1 867 aa19.94■□□□□ 0.78
VPS51-216ENST00000534591 APOBEC3HQ6NTF7 200 aaKnown RBP19.94■□□□□ 0.78
VPS51-216ENST00000534591 KIAA0825Q8IV33 1275 aa19.94■□□□□ 0.78
VPS51-216ENST00000534591 DDX11Q96FC9 970 aa19.94■□□□□ 0.78
VPS51-216ENST00000534591 ZKSCAN3Q9BRR0 538 aa19.94■□□□□ 0.78
VPS51-216ENST00000534591 SAP30BPQ9UHR5 308 aaKnown RBP19.94■□□□□ 0.78
VPS51-216ENST00000534591 PCNTO95613 3336 aa19.94■□□□□ 0.78
VPS51-216ENST00000534591 MYH1P12882 1939 aa19.94■□□□□ 0.78
VPS51-216ENST00000534591 SHTN1A0MZ66 631 aa19.93■□□□□ 0.78
VPS51-216ENST00000534591 GOLGA8AA7E2F4 631 aa19.93■□□□□ 0.78
VPS51-216ENST00000534591 EVX2Q03828 476 aa19.93■□□□□ 0.78
VPS51-216ENST00000534591 PPP2R5BQ15173 497 aa19.93■□□□□ 0.78
VPS51-216ENST00000534591 EAPPQ56P03 285 aaPredicted RBP19.93■□□□□ 0.78
VPS51-216ENST00000534591 MCTP1Q6DN14 999 aa19.93■□□□□ 0.78
VPS51-216ENST00000534591 CIAPIN1Q6FI81 312 aa19.93■□□□□ 0.78
VPS51-216ENST00000534591 CDC42EP5Q6NZY7 148 aa19.93■□□□□ 0.78
VPS51-216ENST00000534591 ENAHQ8N8S7 591 aaPredicted RBP19.93■□□□□ 0.78
VPS51-216ENST00000534591 RGS22Q8NE09 1264 aa19.93■□□□□ 0.78
VPS51-216ENST00000534591 MKNK2Q9HBH9 465 aa19.93■□□□□ 0.78
VPS51-216ENST00000534591 POLR2AP24928 1970 aaKnown RBP19.93■□□□□ 0.78
VPS51-216ENST00000534591 WDHD1O75717 1129 aaPredicted RBP19.92■□□□□ 0.78
VPS51-216ENST00000534591 VIL1P09327 827 aaKnown RBP19.92■□□□□ 0.78
VPS51-216ENST00000534591 GMPSP49915 693 aaPredicted RBP19.92■□□□□ 0.78
VPS51-216ENST00000534591 SKOR2Q2VWA4 1001 aaPredicted RBP19.92■□□□□ 0.78
VPS51-216ENST00000534591 C16orf86Q6ZW13 317 aa19.92■□□□□ 0.78
VPS51-216ENST00000534591 TTC6Q86TZ1 520 aa19.92■□□□□ 0.78
VPS51-216ENST00000534591 MICU3Q86XE3 530 aa19.92■□□□□ 0.78
VPS51-216ENST00000534591 CCDC196A0A1B0GTZ2 297 aa19.92■□□□□ 0.78
VPS51-216ENST00000534591 TSPY2A6NKD2 308 aa19.92■□□□□ 0.78
VPS51-216ENST00000534591 PSMD14O00487 310 aa19.92■□□□□ 0.78
VPS51-216ENST00000534591 DTNBO60941 627 aa19.92■□□□□ 0.78
VPS51-216ENST00000534591 PLCD1P51178 756 aa19.92■□□□□ 0.78
VPS51-216ENST00000534591 IFIT1BQ5T764 474 aaKnown RBP19.92■□□□□ 0.78
VPS51-216ENST00000534591 RSBN1LQ6PCB5 846 aaPredicted RBP19.92■□□□□ 0.78
VPS51-216ENST00000534591 ZNF654Q8IZM8 581 aa19.92■□□□□ 0.78
VPS51-216ENST00000534591 GPRC5DQ9NZD1 345 aa19.92■□□□□ 0.78
VPS51-216ENST00000534591 ZBTB12Q9Y330 459 aaPredicted RBP19.92■□□□□ 0.78
VPS51-216ENST00000534591 H3BQV1 296 aa19.91■□□□□ 0.78
VPS51-216ENST00000534591 NPM3O75607 178 aaKnown RBP19.91■□□□□ 0.78
VPS51-216ENST00000534591 CALM1P0DP23 149 aa19.91■□□□□ 0.78
VPS51-216ENST00000534591 CALM2P0DP24 149 aa19.91■□□□□ 0.78
VPS51-216ENST00000534591 CALM3P0DP25 149 aa19.91■□□□□ 0.78
VPS51-216ENST00000534591 IFFO2Q5TF58 517 aa19.91■□□□□ 0.78
VPS51-216ENST00000534591 CHADLQ6NUI6 762 aa19.91■□□□□ 0.78
VPS51-216ENST00000534591 ZNF444Q8N0Y2 327 aaPredicted RBP19.91■□□□□ 0.78
VPS51-216ENST00000534591 DYNLL2Q96FJ2 89 aa19.91■□□□□ 0.78
VPS51-216ENST00000534591 TCP11L1Q9NUJ3 509 aa19.91■□□□□ 0.78
VPS51-216ENST00000534591 ECM29Q5VYK3 1845 aa19.9■□□□□ 0.78
VPS51-216ENST00000534591 TRAK2O60296 914 aa19.9■□□□□ 0.78
VPS51-216ENST00000534591 TFAP4Q01664 338 aa19.9■□□□□ 0.78
VPS51-216ENST00000534591 CDC37L1Q7L3B6 337 aa19.9■□□□□ 0.78
VPS51-216ENST00000534591 CATIPQ7Z7H3 387 aa19.9■□□□□ 0.78
VPS51-216ENST00000534591 LDHDQ86WU2 507 aa19.9■□□□□ 0.78
VPS51-216ENST00000534591 RAB11FIP4Q86YS3 637 aa19.9■□□□□ 0.78
VPS51-216ENST00000534591 TRPM7Q96QT4 1865 aa19.9■□□□□ 0.78
VPS51-216ENST00000534591 FAM217BQ9NTX9 383 aaPredicted RBP19.9■□□□□ 0.78
VPS51-216ENST00000534591 ORC3Q9UBD5 711 aaPredicted RBP19.9■□□□□ 0.78
VPS51-216ENST00000534591 TAOK2Q9UL54 1235 aa19.9■□□□□ 0.78
VPS51-216ENST00000534591 DDAH1O94760 285 aa19.89■□□□□ 0.77
VPS51-216ENST00000534591 FDPSP14324 419 aaKnown RBP19.89■□□□□ 0.77
VPS51-216ENST00000534591 LMOD1P29536 600 aaPredicted RBP19.89■□□□□ 0.77
VPS51-216ENST00000534591 CDC27P30260 824 aa19.89■□□□□ 0.77
VPS51-216ENST00000534591 ADD1P35611 737 aaKnown RBP19.89■□□□□ 0.77
VPS51-216ENST00000534591 CDK8P49336 464 aa19.89■□□□□ 0.77
VPS51-216ENST00000534591 APLP1P51693 650 aa19.89■□□□□ 0.77
VPS51-216ENST00000534591 RBM5P52756 815 aaKnown RBP eCLIP19.89■□□□□ 0.77
VPS51-216ENST00000534591 RTN1Q16799 776 aa19.89■□□□□ 0.77
VPS51-216ENST00000534591 FAM47AQ5JRC9 791 aa19.89■□□□□ 0.77
VPS51-216ENST00000534591 DGKHQ86XP1 1220 aa19.89■□□□□ 0.77
VPS51-216ENST00000534591 ANKS1AQ92625 1134 aa19.89■□□□□ 0.77
VPS51-216ENST00000534591 GMLQ99445 158 aa19.89■□□□□ 0.77
VPS51-216ENST00000534591 IDI2Q9BXS1 227 aa19.89■□□□□ 0.77
VPS51-216ENST00000534591 OSBPL5Q9H0X9 879 aaPredicted RBP19.89■□□□□ 0.77
VPS51-216ENST00000534591 DDX4Q9NQI0 724 aaKnown RBP19.89■□□□□ 0.77
VPS51-216ENST00000534591 IFNAR1P17181 557 aa19.88■□□□□ 0.77
VPS51-216ENST00000534591 RASA1P20936 1047 aa19.88■□□□□ 0.77
VPS51-216ENST00000534591 PICALMQ13492 652 aa19.88■□□□□ 0.77
VPS51-216ENST00000534591 NTRK3Q16288 839 aa19.88■□□□□ 0.77
VPS51-216ENST00000534591 SLC4A8Q2Y0W8 1093 aa19.88■□□□□ 0.77
VPS51-216ENST00000534591 FANCBQ8NB91 859 aa19.88■□□□□ 0.77
VPS51-216ENST00000534591 MYL10Q9BUA6 226 aa19.88■□□□□ 0.77
VPS51-216ENST00000534591 ZSCAN16Q9H4T2 348 aaPredicted RBP19.88■□□□□ 0.77
VPS51-216ENST00000534591 HDAC9Q9UKV0 1011 aa19.88■□□□□ 0.77
VPS51-216ENST00000534591 STK36Q9NRP7 1315 aa19.88■□□□□ 0.77
VPS51-216ENST00000534591 RXRAP19793 462 aa19.87■□□□□ 0.77
VPS51-216ENST00000534591 TNIP1Q15025 636 aa19.87■□□□□ 0.77
VPS51-216ENST00000534591 MAP1SQ66K74 1059 aaPredicted RBP19.87■□□□□ 0.77
VPS51-216ENST00000534591 AGBL3Q8NEM8 1001 aa19.87■□□□□ 0.77
VPS51-216ENST00000534591 LMBRD1Q9NUN5 540 aa19.87■□□□□ 0.77
VPS51-216ENST00000534591 HLA-DOAP06340 250 aa19.86■□□□□ 0.77
VPS51-216ENST00000534591 TSPY3P0CV98 308 aa19.86■□□□□ 0.77
VPS51-216ENST00000534591 TSPY8P0CW00 308 aa19.86■□□□□ 0.77
VPS51-216ENST00000534591 GABPAQ06546 454 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms