RNA–Protein interactions for RNA: ENST00000534286.5

SORL1-212, Transcript of sortilin related receptor 1, humanhuman

TSL 2 BASIC

Gene SORL1, Length 3,501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-212ENST00000534286 WHAMMQ8TF30 809 aa9.43□□□□□ -0.9
SORL1-212ENST00000534286 VMP1Q96GC9 406 aa9.43□□□□□ -0.9
SORL1-212ENST00000534286 ZCWPW1Q9H0M4 648 aa9.43□□□□□ -0.9
SORL1-212ENST00000534286 TNMDQ9H2S6 317 aa9.43□□□□□ -0.9
SORL1-212ENST00000534286 CYP46A1Q9Y6A2 500 aa9.43□□□□□ -0.9
SORL1-212ENST00000534286 ARHGEF10O15013 1369 aa9.43□□□□□ -0.9
SORL1-212ENST00000534286 CHUKO15111 745 aa9.43□□□□□ -0.9
SORL1-212ENST00000534286 CLCN6P51797 869 aa9.43□□□□□ -0.9
SORL1-212ENST00000534286 PPP2R5BQ15173 497 aa9.43□□□□□ -0.9
SORL1-212ENST00000534286 MAP3K11Q16584 847 aa9.43□□□□□ -0.9
SORL1-212ENST00000534286 SKIDA1Q1XH10 827 aa9.43□□□□□ -0.9
SORL1-212ENST00000534286 CDCA2Q69YH5 1023 aaPredicted RBP9.43□□□□□ -0.9
SORL1-212ENST00000534286 ZCCHC8Q6NZY4 707 aaKnown RBP9.43□□□□□ -0.9
SORL1-212ENST00000534286 DNAJC25Q9H1X3 360 aa9.43□□□□□ -0.9
SORL1-212ENST00000534286 EXOC1Q9NV70 894 aa9.43□□□□□ -0.9
SORL1-212ENST00000534286 PSD3Q9NYI0 1048 aa9.43□□□□□ -0.9
SORL1-212ENST00000534286 LSM1O15116 133 aaKnown RBP9.43□□□□□ -0.9
SORL1-212ENST00000534286 SLC26A4O43511 780 aa9.43□□□□□ -0.9
SORL1-212ENST00000534286 RCN1Q15293 331 aa9.43□□□□□ -0.9
SORL1-212ENST00000534286 KIAA0753Q2KHM9 967 aa9.43□□□□□ -0.9
SORL1-212ENST00000534286 GABPB2Q8TAK5 448 aaPredicted RBP9.43□□□□□ -0.9
SORL1-212ENST00000534286 RSRC1Q96IZ7 334 aaKnown RBP9.43□□□□□ -0.9
SORL1-212ENST00000534286 MPP4Q96JB8 637 aa9.43□□□□□ -0.9
SORL1-212ENST00000534286 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.43□□□□□ -0.92e-6■■■□□ 17.4
SORL1-212ENST00000534286 CBX8Q9HC52 389 aa9.43□□□□□ -0.9
SORL1-212ENST00000534286 SBNO1A3KN83 1393 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 KCNA6P17658 529 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 ZNF132P52740 706 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 CEP135Q66GS9 1140 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 SEPT14Q6ZU15 432 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 PDILTQ8N807 584 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 FAM200AQ8TCP9 573 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 SPIRE2Q8WWL2 714 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 DDX12PQ92771 950 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 HOMER3Q9NSC5 361 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 MKRN1Q9UHC7 482 aaKnown RBP9.42□□□□□ -0.9
SORL1-212ENST00000534286 FLT4P35916 1363 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 GNAT3A8MTJ3 354 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 KCNQ3O43525 872 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 MBD4O95243 580 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 HARSP12081 509 aaKnown RBP9.42□□□□□ -0.9
SORL1-212ENST00000534286 ENOX2Q16206 610 aaKnown RBP9.42□□□□□ -0.9
SORL1-212ENST00000534286 AGAP9Q5VTM2 703 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 SLC30A9Q6PML9 568 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 SYTL4Q96C24 671 aaPredicted RBP9.42□□□□□ -0.9
SORL1-212ENST00000534286 NEUROD6Q96NK8 337 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 CORO1BQ9BR76 489 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 OSBPL10Q9BXB5 764 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 CHPF2Q9P2E5 772 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.42□□□□□ -0.9
SORL1-212ENST00000534286 NDUFB5O43674 189 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 KRT85P78386 507 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 TPD52L1Q16890 204 aaPredicted RBP9.42□□□□□ -0.9
SORL1-212ENST00000534286 LARP1Q6PKG0 1096 aaKnown RBP9.42□□□□□ -0.9
SORL1-212ENST00000534286 TMCO3Q6UWJ1 677 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 BICD2Q8TD16 824 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 CABS1Q96KC9 395 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 CCDC8Q9H0W5 538 aaPredicted RBP9.42□□□□□ -0.9
SORL1-212ENST00000534286 SIL1Q9H173 461 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 PLEKHA4Q9H4M7 779 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 AASDHPPTQ9NRN7 309 aa9.42□□□□□ -0.9
SORL1-212ENST00000534286 ATP8B1O43520 1251 aa9.41□□□□□ -0.9
SORL1-212ENST00000534286 NR1I2O75469 434 aa9.41□□□□□ -0.9
SORL1-212ENST00000534286 VIL1P09327 827 aaKnown RBP9.41□□□□□ -0.9
SORL1-212ENST00000534286 FOSL1P15407 271 aa9.41□□□□□ -0.9
SORL1-212ENST00000534286 TMED1Q13445 227 aa9.41□□□□□ -0.9
SORL1-212ENST00000534286 POSTNQ15063 836 aa9.41□□□□□ -0.9
SORL1-212ENST00000534286 RNF20Q5VTR2 975 aa9.41□□□□□ -0.9
SORL1-212ENST00000534286 OTUD6AQ7L8S5 288 aa9.41□□□□□ -0.9
SORL1-212ENST00000534286 CATIPQ7Z7H3 387 aa9.41□□□□□ -0.9
SORL1-212ENST00000534286 NGDNQ8NEJ9 315 aaKnown RBP9.41□□□□□ -0.9
SORL1-212ENST00000534286 LMBR1Q8WVP7 490 aa9.41□□□□□ -0.9
SORL1-212ENST00000534286 ERO1AQ96HE7 468 aa9.41□□□□□ -0.9
SORL1-212ENST00000534286 RBM8AQ9Y5S9 174 aaKnown RBP9.41□□□□□ -0.9
SORL1-212ENST00000534286 NDUFB9Q9Y6M9 179 aa9.41□□□□□ -0.9
SORL1-212ENST00000534286 ZEB2O60315 1214 aa9.41□□□□□ -0.9
SORL1-212ENST00000534286 ERLIN1O75477 346 aa9.41□□□□□ -0.9
SORL1-212ENST00000534286 MATR3P43243 847 aaKnown RBP eCLIP9.41□□□□□ -0.93e-8■■■■□ 21.1
SORL1-212ENST00000534286 SMC1AQ14683 1233 aaKnown RBP9.41□□□□□ -0.9
SORL1-212ENST00000534286 KRT72Q14CN4 511 aa9.41□□□□□ -0.9
SORL1-212ENST00000534286 CCDC144BQ3MJ40 725 aa9.41□□□□□ -0.9
SORL1-212ENST00000534286 NEK10Q6ZWH5 1172 aa9.41□□□□□ -0.9
SORL1-212ENST00000534286 CCDC144CPQ8IYA2 1237 aa9.41□□□□□ -0.9
SORL1-212ENST00000534286 RNF168Q8IYW5 571 aaPredicted RBP9.41□□□□□ -0.9
SORL1-212ENST00000534286 TRPV5Q9NQA5 729 aa9.41□□□□□ -0.9
SORL1-212ENST00000534286 HELLSQ9NRZ9 838 aa9.41□□□□□ -0.9
SORL1-212ENST00000534286 IP6K2Q9UHH9 426 aa9.41□□□□□ -0.9
SORL1-212ENST00000534286 KDRP35968 1356 aa9.4□□□□□ -0.9
SORL1-212ENST00000534286 USP27XA6NNY8 438 aa9.4□□□□□ -0.9
SORL1-212ENST00000534286 SCG2P13521 617 aa9.4□□□□□ -0.9
SORL1-212ENST00000534286 ANKLE2Q86XL3 938 aa9.4□□□□□ -0.9
SORL1-212ENST00000534286 PEX5LQ8IYB4 626 aa9.4□□□□□ -0.9
SORL1-212ENST00000534286 LSM14AQ8ND56 463 aaKnown RBP9.4□□□□□ -0.9
SORL1-212ENST00000534286 CACTINQ8WUQ7 758 aaKnown RBP9.4□□□□□ -0.9
SORL1-212ENST00000534286 EDC3Q96F86 508 aaKnown RBP9.4□□□□□ -0.9
SORL1-212ENST00000534286 RBM41Q96IZ5 413 aaKnown RBP9.4□□□□□ -0.9
SORL1-212ENST00000534286 YIPF3Q9GZM5 350 aa9.4□□□□□ -0.9
SORL1-212ENST00000534286 FAM107BQ9H098 131 aa9.4□□□□□ -0.9
SORL1-212ENST00000534286 GOLGA6L10A6NI86 522 aa9.4□□□□□ -0.9
SORL1-212ENST00000534286 JAK2O60674 1132 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms