RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 C19orf81C9J6K1 198 aa10.82□□□□□ -0.68
COPB1-211ENST00000534234 USP17L10C9JJH3 530 aa10.82□□□□□ -0.68
COPB1-211ENST00000534234 GOLIM4O00461 696 aa10.82□□□□□ -0.68
COPB1-211ENST00000534234 ADCY3O60266 1144 aa10.82□□□□□ -0.68
COPB1-211ENST00000534234 UBXN2AP68543 259 aa10.82□□□□□ -0.68
COPB1-211ENST00000534234 FAM110CQ1W6H9 321 aa10.82□□□□□ -0.68
COPB1-211ENST00000534234 SHROOM1Q2M3G4 852 aaPredicted RBP10.82□□□□□ -0.68
COPB1-211ENST00000534234 C20orf194Q5TEA3 1177 aa10.82□□□□□ -0.68
COPB1-211ENST00000534234 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.82□□□□□ -0.68
COPB1-211ENST00000534234 COA7Q96BR5 231 aa10.82□□□□□ -0.68
COPB1-211ENST00000534234 RIOK1Q9BRS2 568 aaKnown RBP10.82□□□□□ -0.68
COPB1-211ENST00000534234 SERPINB13Q9UIV8 391 aa10.82□□□□□ -0.68
COPB1-211ENST00000534234 ZBTB21Q9ULJ3 1066 aa10.82□□□□□ -0.68
COPB1-211ENST00000534234 SLC34A2O95436 690 aa10.81□□□□□ -0.68
COPB1-211ENST00000534234 GH2P01242 217 aa10.81□□□□□ -0.68
COPB1-211ENST00000534234 CCL5P13501 91 aa10.81□□□□□ -0.68
COPB1-211ENST00000534234 PDE6AP16499 860 aa10.81□□□□□ -0.68
COPB1-211ENST00000534234 HOXA7P31268 230 aaPredicted RBP10.81□□□□□ -0.68
COPB1-211ENST00000534234 IRX3P78415 501 aaPredicted RBP10.81□□□□□ -0.68
COPB1-211ENST00000534234 TATDN1Q6P1N9 297 aa10.81□□□□□ -0.68
COPB1-211ENST00000534234 SLAIN1Q8ND83 568 aa10.81□□□□□ -0.68
COPB1-211ENST00000534234 PXYLP1Q8TE99 480 aa10.81□□□□□ -0.68
COPB1-211ENST00000534234 P2RX7Q99572 595 aaKnown RBP10.81□□□□□ -0.68
COPB1-211ENST00000534234 RNF208Q9H0X6 261 aa10.81□□□□□ -0.68
COPB1-211ENST00000534234 EHD4Q9H223 541 aa10.81□□□□□ -0.68
COPB1-211ENST00000534234 ZNF532Q9HCE3 1301 aa10.8□□□□□ -0.68
COPB1-211ENST00000534234 DOCK2Q92608 1830 aa10.8□□□□□ -0.68
COPB1-211ENST00000534234 POLR3DP05423 398 aaPredicted RBP10.8□□□□□ -0.68
COPB1-211ENST00000534234 GJB1P08034 283 aa10.8□□□□□ -0.68
COPB1-211ENST00000534234 ELNP15502 786 aa10.8□□□□□ -0.68
COPB1-211ENST00000534234 PLCD1P51178 756 aa10.8□□□□□ -0.68
COPB1-211ENST00000534234 IRF5Q13568 498 aa10.8□□□□□ -0.68
COPB1-211ENST00000534234 CERKLQ49MI3 558 aaPredicted RBP10.8□□□□□ -0.68
COPB1-211ENST00000534234 NKX2-3Q8TAU0 364 aa10.8□□□□□ -0.68
COPB1-211ENST00000534234 EDC3Q96F86 508 aaKnown RBP10.8□□□□□ -0.68
COPB1-211ENST00000534234 CRNKL1Q9BZJ0 848 aaKnown RBP10.8□□□□□ -0.68
COPB1-211ENST00000534234 BOLA2Q9H3K6 86 aa10.8□□□□□ -0.68
COPB1-211ENST00000534234 TAOK2Q9UL54 1235 aa10.8□□□□□ -0.68
COPB1-211ENST00000534234 ATP5JP18859 108 aa10.79□□□□□ -0.68
COPB1-211ENST00000534234 RAB3GAP1Q15042 981 aa10.79□□□□□ -0.68
COPB1-211ENST00000534234 CABP5Q9NP86 173 aa10.79□□□□□ -0.68
COPB1-211ENST00000534234 EMILIN3Q9NT22 766 aa10.79□□□□□ -0.68
COPB1-211ENST00000534234 PAG1Q9NWQ8 432 aa10.79□□□□□ -0.68
COPB1-211ENST00000534234 MCM9Q9NXL9 1143 aa10.79□□□□□ -0.68
COPB1-211ENST00000534234 TCRBV5S4A2TA0A5A2 114 aa10.78□□□□□ -0.68
COPB1-211ENST00000534234 INHAP05111 366 aa10.78□□□□□ -0.68
COPB1-211ENST00000534234 GJA8P48165 433 aa10.78□□□□□ -0.68
COPB1-211ENST00000534234 HERVK_113P62684 666 aa10.78□□□□□ -0.68
COPB1-211ENST00000534234 ABCB5Q2M3G0 1257 aa10.78□□□□□ -0.68
COPB1-211ENST00000534234 USP17L2Q6R6M4 530 aa10.78□□□□□ -0.68
COPB1-211ENST00000534234 SHISA4Q96DD7 197 aa10.78□□□□□ -0.68
COPB1-211ENST00000534234 LRRCC1Q9C099 1032 aa10.78□□□□□ -0.68
COPB1-211ENST00000534234 UNC93B1Q9H1C4 597 aa10.78□□□□□ -0.68
COPB1-211ENST00000534234 MORF4L1Q9UBU8 362 aa10.78□□□□□ -0.68
COPB1-211ENST00000534234 GJD2Q9UKL4 321 aa10.78□□□□□ -0.68
COPB1-211ENST00000534234 PDE4DIPQ5VU43 2346 aa10.78□□□□□ -0.68
COPB1-211ENST00000534234 SMARCA5O60264 1052 aaPredicted RBP10.77□□□□□ -0.68
COPB1-211ENST00000534234 PEX10O60683 326 aa10.77□□□□□ -0.68
COPB1-211ENST00000534234 SGPL1O95470 568 aa10.77□□□□□ -0.68
COPB1-211ENST00000534234 SHMT1P34896 483 aa10.77□□□□□ -0.68
COPB1-211ENST00000534234 CACNB1Q02641 598 aaPredicted RBP10.77□□□□□ -0.68
COPB1-211ENST00000534234 ZYXQ15942 572 aaKnown RBP10.77□□□□□ -0.68
COPB1-211ENST00000534234 LCORLQ8N3X6 602 aa10.77□□□□□ -0.68
COPB1-211ENST00000534234 GPRC5AQ8NFJ5 357 aa10.77□□□□□ -0.68
COPB1-211ENST00000534234 U2AF1L4Q8WU68 220 aaKnown RBP10.77□□□□□ -0.68
COPB1-211ENST00000534234 SDR42E1Q8WUS8 393 aa10.77□□□□□ -0.68
COPB1-211ENST00000534234 GCC1Q96CN9 775 aa10.77□□□□□ -0.68
COPB1-211ENST00000534234 FEZ1Q99689 392 aa10.77□□□□□ -0.68
COPB1-211ENST00000534234 HAUS7Q99871 368 aa10.77□□□□□ -0.68
COPB1-211ENST00000534234 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.77□□□□□ -0.682e-7■■■■□ 21.9
COPB1-211ENST00000534234 ARMT1Q9H993 441 aa10.77□□□□□ -0.68
COPB1-211ENST00000534234 DCP1AQ9NPI6 582 aaPredicted RBP10.77□□□□□ -0.68
COPB1-211ENST00000534234 RBPJLQ9UBG7 517 aa10.77□□□□□ -0.68
COPB1-211ENST00000534234 ZSWIM8A7E2V4 1837 aa10.77□□□□□ -0.68
COPB1-211ENST00000534234 DOCK1Q14185 1865 aa10.77□□□□□ -0.69
COPB1-211ENST00000534234 ADD2P35612 726 aa10.77□□□□□ -0.69
COPB1-211ENST00000534234 USP14P54578 494 aa10.77□□□□□ -0.69
COPB1-211ENST00000534234 GABPAQ06546 454 aa10.77□□□□□ -0.69
COPB1-211ENST00000534234 Q3C1V9 767 aa10.77□□□□□ -0.69
COPB1-211ENST00000534234 SLFNL1Q499Z3 407 aa10.77□□□□□ -0.69
COPB1-211ENST00000534234 ACER1Q8TDN7 264 aa10.77□□□□□ -0.69
COPB1-211ENST00000534234 KIAA1683Q9H0B3 1180 aa10.77□□□□□ -0.69
COPB1-211ENST00000534234 TXNRD2Q9NNW7 524 aa10.77□□□□□ -0.69
COPB1-211ENST00000534234 CENPFP49454 3210 aa10.76□□□□□ -0.69
COPB1-211ENST00000534234 USP17L15C9J2P7 530 aa10.76□□□□□ -0.69
COPB1-211ENST00000534234 USP17L13C9JLJ4 530 aa10.76□□□□□ -0.69
COPB1-211ENST00000534234 USP17L11C9JVI0 530 aa10.76□□□□□ -0.69
COPB1-211ENST00000534234 USP17L18D6R9N7 530 aa10.76□□□□□ -0.69
COPB1-211ENST00000534234 USP17L22D6RA61 530 aa10.76□□□□□ -0.69
COPB1-211ENST00000534234 USP17L17D6RBQ6 530 aa10.76□□□□□ -0.69
COPB1-211ENST00000534234 USP17L19D6RCP7 530 aa10.76□□□□□ -0.69
COPB1-211ENST00000534234 USP17L20D6RJB6 530 aa10.76□□□□□ -0.69
COPB1-211ENST00000534234 PRKAB2O43741 272 aa10.76□□□□□ -0.69
COPB1-211ENST00000534234 MBD4O95243 580 aa10.76□□□□□ -0.69
COPB1-211ENST00000534234 TFRCP02786 760 aaKnown RBP10.76□□□□□ -0.69
COPB1-211ENST00000534234 EVX2Q03828 476 aa10.76□□□□□ -0.69
COPB1-211ENST00000534234 C1QBPQ07021 282 aaKnown RBP10.76□□□□□ -0.69
COPB1-211ENST00000534234 USP17L24Q0WX57 530 aa10.76□□□□□ -0.69
COPB1-211ENST00000534234 CCAR1Q8IX12 1150 aaKnown RBP10.76□□□□□ -0.69
COPB1-211ENST00000534234 DPF3Q92784 378 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms