RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 MYH7P12883 1935 aa18.6■□□□□ 0.57
UBXN1-217ENST00000534176 PHIPQ8WWQ0 1821 aa18.6■□□□□ 0.57
UBXN1-217ENST00000534176 ATAD5Q96QE3 1844 aa18.6■□□□□ 0.57
UBXN1-217ENST00000534176 USP17L10C9JJH3 530 aa18.59■□□□□ 0.57
UBXN1-217ENST00000534176 MBD4O95243 580 aa18.59■□□□□ 0.57
UBXN1-217ENST00000534176 USP14P54578 494 aa18.59■□□□□ 0.57
UBXN1-217ENST00000534176 CERKLQ49MI3 558 aaPredicted RBP18.59■□□□□ 0.57
UBXN1-217ENST00000534176 ANKRD45Q5TZF3 282 aa18.59■□□□□ 0.57
UBXN1-217ENST00000534176 LCORLQ8N3X6 602 aa18.59■□□□□ 0.57
UBXN1-217ENST00000534176 APPBP2Q92624 585 aa18.59■□□□□ 0.57
UBXN1-217ENST00000534176 EDC3Q96F86 508 aaKnown RBP18.59■□□□□ 0.57
UBXN1-217ENST00000534176 PTPN22Q9Y2R2 807 aa18.59■□□□□ 0.57
UBXN1-217ENST00000534176 SIPA1L1O43166 1804 aa18.58■□□□□ 0.57
UBXN1-217ENST00000534176 OSBPP22059 807 aa18.58■□□□□ 0.56
UBXN1-217ENST00000534176 GCLCP48506 637 aaPredicted RBP18.58■□□□□ 0.56
UBXN1-217ENST00000534176 NBPF11Q86T75 865 aa18.58■□□□□ 0.56
UBXN1-217ENST00000534176 GTF3C2Q8WUA4 911 aaPredicted RBP18.58■□□□□ 0.56
UBXN1-217ENST00000534176 PTPRFP10586 1907 aa18.58■□□□□ 0.56
UBXN1-217ENST00000534176 NAV1Q8NEY1 1877 aa18.58■□□□□ 0.56
UBXN1-217ENST00000534176 DDX60LQ5H9U9 1706 aaKnown RBP18.57■□□□□ 0.56
UBXN1-217ENST00000534176 ADGRA2Q96PE1 1338 aa18.57■□□□□ 0.56
UBXN1-217ENST00000534176 RNF113AO15541 343 aaKnown RBP18.57■□□□□ 0.56
UBXN1-217ENST00000534176 RGS19P49795 217 aa18.57■□□□□ 0.56
UBXN1-217ENST00000534176 GABPAQ06546 454 aa18.57■□□□□ 0.56
UBXN1-217ENST00000534176 ABCB5Q2M3G0 1257 aa18.57■□□□□ 0.56
UBXN1-217ENST00000534176 CCDC17Q96LX7 622 aa18.57■□□□□ 0.56
UBXN1-217ENST00000534176 ARMT1Q9H993 441 aa18.57■□□□□ 0.56
UBXN1-217ENST00000534176 ARPP21Q9UBL0 812 aaPredicted RBP18.57■□□□□ 0.56
UBXN1-217ENST00000534176 LOC285556D6RIA3 1793 aa18.56■□□□□ 0.56
UBXN1-217ENST00000534176 HOXA7P31268 230 aaPredicted RBP18.56■□□□□ 0.56
UBXN1-217ENST00000534176 HMGCS2P54868 508 aa18.56■□□□□ 0.56
UBXN1-217ENST00000534176 PI4K2BQ8TCG2 481 aa18.56■□□□□ 0.56
UBXN1-217ENST00000534176 SDR42E1Q8WUS8 393 aa18.56■□□□□ 0.56
UBXN1-217ENST00000534176 ZNF287Q9HBT7 754 aa18.56■□□□□ 0.56
UBXN1-217ENST00000534176 STAP2Q9UGK3 403 aa18.56■□□□□ 0.56
UBXN1-217ENST00000534176 SLC4A4Q9Y6R1 1079 aa18.56■□□□□ 0.56
UBXN1-217ENST00000534176 GH2P01242 217 aa18.55■□□□□ 0.56
UBXN1-217ENST00000534176 BCRP11274 1271 aa18.55■□□□□ 0.56
UBXN1-217ENST00000534176 PLCD1P51178 756 aa18.55■□□□□ 0.56
UBXN1-217ENST00000534176 FCGRTP55899 365 aa18.55■□□□□ 0.56
UBXN1-217ENST00000534176 USP17L2Q6R6M4 530 aa18.55■□□□□ 0.56
UBXN1-217ENST00000534176 SMC5Q8IY18 1101 aa18.55■□□□□ 0.56
UBXN1-217ENST00000534176 CPA4Q9UI42 421 aa18.55■□□□□ 0.56
UBXN1-217ENST00000534176 GDF11O95390 407 aa18.54■□□□□ 0.56
UBXN1-217ENST00000534176 SLURP2P0DP57 97 aa18.54■□□□□ 0.56
UBXN1-217ENST00000534176 IRX3P78415 501 aaPredicted RBP18.54■□□□□ 0.56
UBXN1-217ENST00000534176 MTMR2Q13614 643 aa18.54■□□□□ 0.56
UBXN1-217ENST00000534176 RRP1BQ14684 758 aaKnown RBP18.54■□□□□ 0.56
UBXN1-217ENST00000534176 FAM110CQ1W6H9 321 aa18.54■□□□□ 0.56
UBXN1-217ENST00000534176 TMEM179Q6ZVK1 233 aa18.54■□□□□ 0.56
UBXN1-217ENST00000534176 EVI5LQ96CN4 794 aa18.54■□□□□ 0.56
UBXN1-217ENST00000534176 C12orf42Q96LP6 360 aa18.54■□□□□ 0.56
UBXN1-217ENST00000534176 NACAP1Q9BZK3 213 aa18.54■□□□□ 0.56
UBXN1-217ENST00000534176 PUS7LQ9H0K6 701 aaKnown RBP18.54■□□□□ 0.56
UBXN1-217ENST00000534176 SH2D4AQ9H788 454 aa18.54■□□□□ 0.56
UBXN1-217ENST00000534176 SALL3Q9BXA9 1300 aa18.53■□□□□ 0.56
UBXN1-217ENST00000534176 CYP2C8P10632 490 aa18.53■□□□□ 0.56
UBXN1-217ENST00000534176 SHMT1P34896 483 aa18.53■□□□□ 0.56
UBXN1-217ENST00000534176 RAB3GAP1Q15042 981 aa18.53■□□□□ 0.56
UBXN1-217ENST00000534176 SBK1Q52WX2 424 aa18.53■□□□□ 0.56
UBXN1-217ENST00000534176 C12orf60Q5U649 245 aa18.53■□□□□ 0.56
UBXN1-217ENST00000534176 ARMC5Q96C12 935 aa18.53■□□□□ 0.56
UBXN1-217ENST00000534176 STRBPQ96SI9 672 aaKnown RBP18.53■□□□□ 0.56
UBXN1-217ENST00000534176 FEZ1Q99689 392 aa18.53■□□□□ 0.56
UBXN1-217ENST00000534176 FSD1Q9BTV5 496 aa18.53■□□□□ 0.56
UBXN1-217ENST00000534176 KIAA1683Q9H0B3 1180 aa18.53■□□□□ 0.56
UBXN1-217ENST00000534176 SUPT16HQ9Y5B9 1047 aaKnown RBP18.53■□□□□ 0.56
UBXN1-217ENST00000534176 FMNL1O95466 1100 aaPredicted RBP18.52■□□□□ 0.56
UBXN1-217ENST00000534176 PSMC4P43686 418 aa18.52■□□□□ 0.56
UBXN1-217ENST00000534176 SLC4A8Q2Y0W8 1093 aa18.52■□□□□ 0.56
UBXN1-217ENST00000534176 SRRDQ9UH36 339 aa18.52■□□□□ 0.56
UBXN1-217ENST00000534176 USP17L12C9JPN9 530 aa18.51■□□□□ 0.55
UBXN1-217ENST00000534176 USP17L21D6R901 530 aa18.51■□□□□ 0.55
UBXN1-217ENST00000534176 GPAA1O43292 621 aa18.51■□□□□ 0.55
UBXN1-217ENST00000534176 PDE1AP54750 535 aa18.51■□□□□ 0.55
UBXN1-217ENST00000534176 SLC9C1Q4G0N8 1177 aa18.51■□□□□ 0.55
UBXN1-217ENST00000534176 TREML2Q5T2D2 321 aa18.51■□□□□ 0.55
UBXN1-217ENST00000534176 C16orf86Q6ZW13 317 aa18.51■□□□□ 0.55
UBXN1-217ENST00000534176 CCDC84Q86UT8 332 aaPredicted RBP18.51■□□□□ 0.55
UBXN1-217ENST00000534176 ASCC2Q9H1I8 757 aaPredicted RBP18.51■□□□□ 0.55
UBXN1-217ENST00000534176 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.51■□□□□ 0.55
UBXN1-217ENST00000534176 CAPN2P17655 700 aa18.5■□□□□ 0.55
UBXN1-217ENST00000534176 MLLT1Q03111 559 aaPredicted RBP18.5■□□□□ 0.55
UBXN1-217ENST00000534176 TSHZ3Q63HK5 1081 aa18.5■□□□□ 0.55
UBXN1-217ENST00000534176 OSBP2Q969R2 916 aa18.5■□□□□ 0.55
UBXN1-217ENST00000534176 COA7Q96BR5 231 aa18.5■□□□□ 0.55
UBXN1-217ENST00000534176 ARHGEF10LQ9HCE6 1279 aa18.5■□□□□ 0.55
UBXN1-217ENST00000534176 USP17L15C9J2P7 530 aa18.49■□□□□ 0.55
UBXN1-217ENST00000534176 PATL2C9JE40 543 aaKnown RBP18.49■□□□□ 0.55
UBXN1-217ENST00000534176 USP17L13C9JLJ4 530 aa18.49■□□□□ 0.55
UBXN1-217ENST00000534176 USP17L11C9JVI0 530 aa18.49■□□□□ 0.55
UBXN1-217ENST00000534176 USP17L18D6R9N7 530 aa18.49■□□□□ 0.55
UBXN1-217ENST00000534176 USP17L22D6RA61 530 aa18.49■□□□□ 0.55
UBXN1-217ENST00000534176 USP17L17D6RBQ6 530 aa18.49■□□□□ 0.55
UBXN1-217ENST00000534176 USP17L19D6RCP7 530 aa18.49■□□□□ 0.55
UBXN1-217ENST00000534176 USP17L20D6RJB6 530 aa18.49■□□□□ 0.55
UBXN1-217ENST00000534176 MPHOSPH10O00566 681 aaKnown RBP18.49■□□□□ 0.55
UBXN1-217ENST00000534176 PRKAB2O43741 272 aa18.49■□□□□ 0.55
UBXN1-217ENST00000534176 SLC3A2P08195 630 aaKnown RBP18.49■□□□□ 0.55
UBXN1-217ENST00000534176 NUCB1Q02818 461 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms