RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 HTR3BO95264 441 aa5.2□□□□□ -1.58
CSMD3-210ENST00000534172 RAB6AP20340 208 aa5.2□□□□□ -1.58
CSMD3-210ENST00000534172 ZNF746Q6NUN9 644 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-210ENST00000534172 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-210ENST00000534172 PRR23CQ6ZRP0 262 aa5.2□□□□□ -1.58
CSMD3-210ENST00000534172 TAB3Q8N5C8 712 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-210ENST00000534172 ISL2Q96A47 359 aa5.2□□□□□ -1.58
CSMD3-210ENST00000534172 FOXQ1Q9C009 403 aa5.2□□□□□ -1.58
CSMD3-210ENST00000534172 GMIPQ9P107 970 aa5.2□□□□□ -1.58
CSMD3-210ENST00000534172 ZNRF3Q9ULT6 936 aa5.2□□□□□ -1.58
CSMD3-210ENST00000534172 EFR3BQ9Y2G0 817 aa5.2□□□□□ -1.58
CSMD3-210ENST00000534172 SLC12A7Q9Y666 1083 aa5.2□□□□□ -1.58
CSMD3-210ENST00000534172 MEIS3P2A8K0S8 358 aa5.2□□□□□ -1.58
CSMD3-210ENST00000534172 CST3P01034 146 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-210ENST00000534172 SSBP05455 408 aaKnown RBP eCLIP5.2□□□□□ -1.58
CSMD3-210ENST00000534172 CCNFP41002 786 aa5.2□□□□□ -1.58
CSMD3-210ENST00000534172 EIF6P56537 245 aaKnown RBP5.2□□□□□ -1.58
CSMD3-210ENST00000534172 NFKBIBQ15653 356 aa5.2□□□□□ -1.58
CSMD3-210ENST00000534172 FBXO27Q8NI29 283 aa5.2□□□□□ -1.58
CSMD3-210ENST00000534172 TMEM87BQ96K49 555 aa5.2□□□□□ -1.58
CSMD3-210ENST00000534172 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.2□□□□□ -1.58
CSMD3-210ENST00000534172 SRRTQ9BXP5 876 aaKnown RBP5.2□□□□□ -1.58
CSMD3-210ENST00000534172 GINM1Q9NU53 330 aa5.2□□□□□ -1.58
CSMD3-210ENST00000534172 POLR3KQ9Y2Y1 108 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-210ENST00000534172 ATP2B1P20020 1258 aa5.19□□□□□ -1.58
CSMD3-210ENST00000534172 NASPP49321 788 aaPredicted RBP5.19□□□□□ -1.58
CSMD3-210ENST00000534172 CHMP4BP1P59074 171 aa5.19□□□□□ -1.58
CSMD3-210ENST00000534172 SGO2Q562F6 1265 aa5.19□□□□□ -1.58
CSMD3-210ENST00000534172 TNNI3KQ59H18 835 aa5.19□□□□□ -1.58
CSMD3-210ENST00000534172 INTS3Q68E01 1043 aaKnown RBP5.19□□□□□ -1.58
CSMD3-210ENST00000534172 CDPF1Q6NVV7 123 aa5.19□□□□□ -1.58
CSMD3-210ENST00000534172 FBLIM1Q8WUP2 373 aa5.19□□□□□ -1.58
CSMD3-210ENST00000534172 TM9SF2Q99805 663 aa5.19□□□□□ -1.58
CSMD3-210ENST00000534172 REV1Q9UBZ9 1251 aa5.19□□□□□ -1.58
CSMD3-210ENST00000534172 NEFMP07197 916 aa5.19□□□□□ -1.58
CSMD3-210ENST00000534172 CYP7A1P22680 504 aa5.19□□□□□ -1.58
CSMD3-210ENST00000534172 CRKP46108 304 aa5.19□□□□□ -1.58
CSMD3-210ENST00000534172 CYP27C1Q4G0S4 372 aa5.19□□□□□ -1.58
CSMD3-210ENST00000534172 METTL22Q9BUU2 404 aaPredicted RBP5.19□□□□□ -1.58
CSMD3-210ENST00000534172 SEMA6CQ9H3T2 930 aa5.19□□□□□ -1.58
CSMD3-210ENST00000534172 NFICP08651 508 aa5.18□□□□□ -1.58
CSMD3-210ENST00000534172 HCLS1P14317 486 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-210ENST00000534172 CANXP27824 592 aaKnown RBP5.18□□□□□ -1.58
CSMD3-210ENST00000534172 RNF43Q68DV7 783 aa5.18□□□□□ -1.58
CSMD3-210ENST00000534172 GK5Q6ZS86 529 aa5.18□□□□□ -1.58
CSMD3-210ENST00000534172 SLFN12Q8IYM2 578 aa5.18□□□□□ -1.58
CSMD3-210ENST00000534172 C19orf47Q8N9M1 422 aaKnown RBP5.18□□□□□ -1.58
CSMD3-210ENST00000534172 FAM13CQ8NE31 585 aa5.18□□□□□ -1.58
CSMD3-210ENST00000534172 TMEM40Q8WWA1 233 aa5.18□□□□□ -1.58
CSMD3-210ENST00000534172 TPSG1Q9NRR2 321 aa5.18□□□□□ -1.58
CSMD3-210ENST00000534172 DAGLAQ9Y4D2 1042 aa5.18□□□□□ -1.58
CSMD3-210ENST00000534172 ETV3P41162 512 aa5.18□□□□□ -1.58
CSMD3-210ENST00000534172 TNNI2P48788 182 aa5.18□□□□□ -1.58
CSMD3-210ENST00000534172 CLCQ05315 142 aa5.18□□□□□ -1.58
CSMD3-210ENST00000534172 CDCP2Q5VXM1 449 aa5.18□□□□□ -1.58
CSMD3-210ENST00000534172 SPOCK3Q9BQ16 436 aa5.18□□□□□ -1.58
CSMD3-210ENST00000534172 DBNDD2Q9BQY9 259 aa5.18□□□□□ -1.58
CSMD3-210ENST00000534172 TANGO6Q9C0B7 1094 aa5.18□□□□□ -1.58
CSMD3-210ENST00000534172 C7orf69Q9H7B7 122 aa5.18□□□□□ -1.58
CSMD3-210ENST00000534172 TJP2Q9UDY2 1190 aa5.18□□□□□ -1.58
CSMD3-210ENST00000534172 DNAJA1P31689 397 aaKnown RBP5.17□□□□□ -1.58
CSMD3-210ENST00000534172 DUSP27Q5VZP5 1158 aa5.17□□□□□ -1.58
CSMD3-210ENST00000534172 CCDC74BQ96LY2 380 aa5.17□□□□□ -1.58
CSMD3-210ENST00000534172 HIRIP3Q9BW71 556 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-210ENST00000534172 ATG3Q9NT62 314 aa5.17□□□□□ -1.58
CSMD3-210ENST00000534172 PRKAG2Q9UGJ0 569 aa5.17□□□□□ -1.58
CSMD3-210ENST00000534172 GRIN3BO60391 1043 aa5.17□□□□□ -1.58
CSMD3-210ENST00000534172 IGLV1-40P01703 118 aa5.17□□□□□ -1.58
CSMD3-210ENST00000534172 NTF4P34130 210 aa5.17□□□□□ -1.58
CSMD3-210ENST00000534172 GIPRP48546 466 aa5.17□□□□□ -1.58
CSMD3-210ENST00000534172 CDK8P49336 464 aa5.17□□□□□ -1.58
CSMD3-210ENST00000534172 SLBPQ14493 270 aaKnown RBP eCLIP5.17□□□□□ -1.58
CSMD3-210ENST00000534172 SEZ6L2Q6UXD5 910 aa5.17□□□□□ -1.58
CSMD3-210ENST00000534172 ACSF2Q96CM8 615 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-210ENST00000534172 CNNM2Q9H8M5 875 aa5.17□□□□□ -1.58
CSMD3-210ENST00000534172 GTF2IRD1Q9UHL9 959 aa5.17□□□□□ -1.58
CSMD3-210ENST00000534172 R3HCC1Q9Y3T6 440 aaKnown RBP5.17□□□□□ -1.58
CSMD3-210ENST00000534172 SLC22A31A6NKX4 558 aa5.16□□□□□ -1.58
CSMD3-210ENST00000534172 STK10O94804 968 aaKnown RBP5.16□□□□□ -1.58
CSMD3-210ENST00000534172 FGRP09769 529 aa5.16□□□□□ -1.58
CSMD3-210ENST00000534172 FBXW10Q5XX13 1052 aa5.16□□□□□ -1.58
CSMD3-210ENST00000534172 OGFOD3Q6PK18 319 aa5.16□□□□□ -1.58
CSMD3-210ENST00000534172 ARMCX6Q7L4S7 300 aa5.16□□□□□ -1.58
CSMD3-210ENST00000534172 DPH6Q7L8W6 267 aa5.16□□□□□ -1.58
CSMD3-210ENST00000534172 CYB5D2Q8WUJ1 264 aa5.16□□□□□ -1.58
CSMD3-210ENST00000534172 DHRS1Q96LJ7 313 aa5.16□□□□□ -1.58
CSMD3-210ENST00000534172 PRDM10Q9NQV6 1147 aa5.16□□□□□ -1.58
CSMD3-210ENST00000534172 ARHGEF11O15085 1522 aa5.16□□□□□ -1.58
CSMD3-210ENST00000534172 CADPSQ9ULU8 1353 aa5.16□□□□□ -1.58
CSMD3-210ENST00000534172 TNFRSF10CO14798 259 aa5.16□□□□□ -1.58
CSMD3-210ENST00000534172 RAG1P15918 1043 aa5.16□□□□□ -1.58
CSMD3-210ENST00000534172 FSTP19883 344 aa5.16□□□□□ -1.58
CSMD3-210ENST00000534172 RNF4P78317 190 aa5.16□□□□□ -1.58
CSMD3-210ENST00000534172 NBPF6Q5VWK0 638 aa5.16□□□□□ -1.58
CSMD3-210ENST00000534172 GPAT2Q6NUI2 795 aa5.16□□□□□ -1.58
CSMD3-210ENST00000534172 ZAR1Q86SH2 424 aa5.16□□□□□ -1.58
CSMD3-210ENST00000534172 NBPF4Q96M43 638 aa5.16□□□□□ -1.58
CSMD3-210ENST00000534172 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.16□□□□□ -1.58
CSMD3-210ENST00000534172 PROCP04070 461 aa5.15□□□□□ -1.58
CSMD3-210ENST00000534172 GBP1P32455 592 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms