RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 GINM1Q9NU53 330 aa20.62■□□□□ 0.89
CAPRIN1-216ENST00000534042 DBNLQ9UJU6 430 aaKnown RBP20.62■□□□□ 0.89
CAPRIN1-216ENST00000534042 ZBTB7BO15156 539 aaPredicted RBP20.61■□□□□ 0.89
CAPRIN1-216ENST00000534042 HMGCRP04035 888 aa20.61■□□□□ 0.89
CAPRIN1-216ENST00000534042 HOXA7P31268 230 aaPredicted RBP20.61■□□□□ 0.89
CAPRIN1-216ENST00000534042 DYNLL1P63167 89 aaKnown RBP20.61■□□□□ 0.89
CAPRIN1-216ENST00000534042 JAG1P78504 1218 aa20.61■□□□□ 0.89
CAPRIN1-216ENST00000534042 HNRNPUQ00839 825 aaKnown RBP eCLIP20.61■□□□□ 0.89
CAPRIN1-216ENST00000534042 CRISPLD2Q9H0B8 497 aa20.61■□□□□ 0.89
CAPRIN1-216ENST00000534042 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.61■□□□□ 0.892e-6■□□□□ 9.2
CAPRIN1-216ENST00000534042 TLR7Q9NYK1 1049 aaKnown RBP20.61■□□□□ 0.89
CAPRIN1-216ENST00000534042 RBM27Q9P2N5 1060 aaKnown RBP20.61■□□□□ 0.89
CAPRIN1-216ENST00000534042 MORF4L1Q9UBU8 362 aa20.61■□□□□ 0.89
CAPRIN1-216ENST00000534042 SAP30BPQ9UHR5 308 aaKnown RBP20.61■□□□□ 0.89
CAPRIN1-216ENST00000534042 GJD2Q9UKL4 321 aa20.61■□□□□ 0.89
CAPRIN1-216ENST00000534042 USP17L10C9JJH3 530 aa20.6■□□□□ 0.89
CAPRIN1-216ENST00000534042 IDH1O75874 414 aaKnown RBP20.6■□□□□ 0.89
CAPRIN1-216ENST00000534042 GDF11O95390 407 aa20.6■□□□□ 0.89
CAPRIN1-216ENST00000534042 EAF2Q96CJ1 260 aaPredicted RBP20.6■□□□□ 0.89
CAPRIN1-216ENST00000534042 P2RX7Q99572 595 aaKnown RBP20.6■□□□□ 0.89
CAPRIN1-216ENST00000534042 ZBTB21Q9ULJ3 1066 aa20.6■□□□□ 0.89
CAPRIN1-216ENST00000534042 MYH1P12882 1939 aa20.6■□□□□ 0.89
CAPRIN1-216ENST00000534042 EVI5O60447 810 aa20.59■□□□□ 0.89
CAPRIN1-216ENST00000534042 RLBP1P12271 317 aa20.59■□□□□ 0.89
CAPRIN1-216ENST00000534042 USP5P45974 858 aa20.58■□□□□ 0.89
CAPRIN1-216ENST00000534042 HERVK_113P62684 666 aa20.58■□□□□ 0.89
CAPRIN1-216ENST00000534042 SHROOM1Q2M3G4 852 aaPredicted RBP20.58■□□□□ 0.89
CAPRIN1-216ENST00000534042 CERS3Q8IU89 383 aa20.58■□□□□ 0.89
CAPRIN1-216ENST00000534042 GPRC5AQ8NFJ5 357 aa20.58■□□□□ 0.89
CAPRIN1-216ENST00000534042 PAWRQ96IZ0 340 aaKnown RBP20.58■□□□□ 0.89
CAPRIN1-216ENST00000534042 RPTORQ8N122 1335 aa20.57■□□□□ 0.88
CAPRIN1-216ENST00000534042 MAGEB6Q8N7X4 407 aa20.57■□□□□ 0.88
CAPRIN1-216ENST00000534042 MIGA1Q8NAN2 632 aa20.57■□□□□ 0.88
CAPRIN1-216ENST00000534042 HMX1Q9NP08 348 aaPredicted RBP20.57■□□□□ 0.88
CAPRIN1-216ENST00000534042 PLXNB2O15031 1838 aa20.56■□□□□ 0.88
CAPRIN1-216ENST00000534042 CYP2B6P20813 491 aa20.56■□□□□ 0.88
CAPRIN1-216ENST00000534042 MAP3K12Q12852 859 aa20.56■□□□□ 0.88
CAPRIN1-216ENST00000534042 CEP85Q6P2H3 762 aa20.56■□□□□ 0.88
CAPRIN1-216ENST00000534042 USP17L2Q6R6M4 530 aa20.56■□□□□ 0.88
CAPRIN1-216ENST00000534042 NECAB2Q7Z6G3 386 aa20.56■□□□□ 0.88
CAPRIN1-216ENST00000534042 ANKLE1Q8NAG6 615 aa20.56■□□□□ 0.88
CAPRIN1-216ENST00000534042 NUDT12Q9BQG2 462 aa20.56■□□□□ 0.88
CAPRIN1-216ENST00000534042 TXNRD2Q9NNW7 524 aa20.56■□□□□ 0.88
CAPRIN1-216ENST00000534042 PEX10O60683 326 aa20.55■□□□□ 0.88
CAPRIN1-216ENST00000534042 TRIM32Q13049 653 aa20.55■□□□□ 0.88
CAPRIN1-216ENST00000534042 ERC1Q8IUD2 1116 aa20.55■□□□□ 0.88
CAPRIN1-216ENST00000534042 CCAR1Q8IX12 1150 aaKnown RBP20.55■□□□□ 0.88
CAPRIN1-216ENST00000534042 GTF3C2Q8WUA4 911 aaPredicted RBP20.55■□□□□ 0.88
CAPRIN1-216ENST00000534042 SOCS4Q8WXH5 440 aa20.55■□□□□ 0.88
CAPRIN1-216ENST00000534042 PRO3102Q9H379 93 aa20.55■□□□□ 0.88
CAPRIN1-216ENST00000534042 NDUFB9Q9Y6M9 179 aa20.55■□□□□ 0.88
CAPRIN1-216ENST00000534042 GH2P01242 217 aa20.54■□□□□ 0.88
CAPRIN1-216ENST00000534042 MAPK4P31152 587 aa20.54■□□□□ 0.88
CAPRIN1-216ENST00000534042 PDE3AQ14432 1141 aa20.54■□□□□ 0.88
CAPRIN1-216ENST00000534042 TMED8Q6PL24 325 aaPredicted RBP20.54■□□□□ 0.88
CAPRIN1-216ENST00000534042 AACSQ86V21 672 aa20.54■□□□□ 0.88
CAPRIN1-216ENST00000534042 DIS3LQ8TF46 1054 aaKnown RBP20.54■□□□□ 0.88
CAPRIN1-216ENST00000534042 TRIB2Q92519 343 aa20.54■□□□□ 0.88
CAPRIN1-216ENST00000534042 ANTXR1Q9H6X2 564 aa20.54■□□□□ 0.88
CAPRIN1-216ENST00000534042 EMILIN3Q9NT22 766 aa20.54■□□□□ 0.88
CAPRIN1-216ENST00000534042 RBPJLQ9UBG7 517 aa20.54■□□□□ 0.88
CAPRIN1-216ENST00000534042 SERPINB13Q9UIV8 391 aa20.54■□□□□ 0.88
CAPRIN1-216ENST00000534042 EXOC6BQ9Y2D4 811 aa20.54■□□□□ 0.88
CAPRIN1-216ENST00000534042 ALPK3Q96L96 1907 aa20.54■□□□□ 0.88
CAPRIN1-216ENST00000534042 XRCC5P13010 732 aaKnown RBP20.53■□□□□ 0.88
CAPRIN1-216ENST00000534042 ERVK-9P63128 1117 aa20.53■□□□□ 0.88
CAPRIN1-216ENST00000534042 ERVK-24P63145 666 aa20.53■□□□□ 0.88
CAPRIN1-216ENST00000534042 TATDN1Q6P1N9 297 aa20.53■□□□□ 0.88
CAPRIN1-216ENST00000534042 TTC6Q86TZ1 520 aa20.53■□□□□ 0.88
CAPRIN1-216ENST00000534042 FEZ1Q99689 392 aa20.53■□□□□ 0.88
CAPRIN1-216ENST00000534042 PAGR1Q9BTK6 254 aa20.53■□□□□ 0.88
CAPRIN1-216ENST00000534042 EHD4Q9H223 541 aa20.53■□□□□ 0.88
CAPRIN1-216ENST00000534042 Q3C1V9 767 aa20.52■□□□□ 0.88
CAPRIN1-216ENST00000534042 TRMT44Q8IYL2 757 aaKnown RBP20.52■□□□□ 0.88
CAPRIN1-216ENST00000534042 PRKAR2AP13861 404 aaKnown RBP20.51■□□□□ 0.87
CAPRIN1-216ENST00000534042 ZYXQ15942 572 aaKnown RBP20.51■□□□□ 0.87
CAPRIN1-216ENST00000534042 CERKLQ49MI3 558 aaPredicted RBP20.51■□□□□ 0.87
CAPRIN1-216ENST00000534042 HSP90AB4PQ58FF6 505 aa20.51■□□□□ 0.87
CAPRIN1-216ENST00000534042 MAP3K21Q5TCX8 1036 aa20.51■□□□□ 0.87
CAPRIN1-216ENST00000534042 PANK1Q8TE04 598 aa20.51■□□□□ 0.87
CAPRIN1-216ENST00000534042 C12orf42Q96LP6 360 aa20.51■□□□□ 0.87
CAPRIN1-216ENST00000534042 NBPF3Q9H094 633 aa20.51■□□□□ 0.87
CAPRIN1-216ENST00000534042 PORCNQ9H237 461 aa20.51■□□□□ 0.87
CAPRIN1-216ENST00000534042 A0A1W2PPC1 479 aa20.5■□□□□ 0.87
CAPRIN1-216ENST00000534042 USP17L15C9J2P7 530 aa20.5■□□□□ 0.87
CAPRIN1-216ENST00000534042 USP17L13C9JLJ4 530 aa20.5■□□□□ 0.87
CAPRIN1-216ENST00000534042 USP17L11C9JVI0 530 aa20.5■□□□□ 0.87
CAPRIN1-216ENST00000534042 USP17L18D6R9N7 530 aa20.5■□□□□ 0.87
CAPRIN1-216ENST00000534042 USP17L22D6RA61 530 aa20.5■□□□□ 0.87
CAPRIN1-216ENST00000534042 USP17L17D6RBQ6 530 aa20.5■□□□□ 0.87
CAPRIN1-216ENST00000534042 USP17L19D6RCP7 530 aa20.5■□□□□ 0.87
CAPRIN1-216ENST00000534042 USP17L20D6RJB6 530 aa20.5■□□□□ 0.87
CAPRIN1-216ENST00000534042 ZKSCAN1P17029 563 aaPredicted RBP20.5■□□□□ 0.87
CAPRIN1-216ENST00000534042 USP14P54578 494 aa20.5■□□□□ 0.87
CAPRIN1-216ENST00000534042 USP17L24Q0WX57 530 aa20.5■□□□□ 0.87
CAPRIN1-216ENST00000534042 RAB3GAP1Q15042 981 aa20.5■□□□□ 0.87
CAPRIN1-216ENST00000534042 ABCB5Q2M3G0 1257 aa20.5■□□□□ 0.87
CAPRIN1-216ENST00000534042 GPR142Q7Z601 462 aa20.5■□□□□ 0.87
CAPRIN1-216ENST00000534042 PLEKHH3Q7Z736 793 aa20.5■□□□□ 0.87
CAPRIN1-216ENST00000534042 MIER1Q8N108 512 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms