RNA–Protein interactions for RNA: ENST00000533889.1

CAPN5-207, Transcript of calpain 5, humanhuman

TSL 3

Gene CAPN5, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-207ENST00000533889 SIPA1L1O43166 1804 aa21.31■■□□□ 1
CAPN5-207ENST00000533889 MAGEB6P1A0A0J9YX57 407 aa21.3■■□□□ 1
CAPN5-207ENST00000533889 GCLCP48506 637 aaPredicted RBP21.3■■□□□ 1
CAPN5-207ENST00000533889 BACE1P56817 501 aa21.3■■□□□ 1
CAPN5-207ENST00000533889 MTMR2Q13614 643 aa21.3■■□□□ 1
CAPN5-207ENST00000533889 MTFR1Q15390 333 aa21.3■■□□□ 1
CAPN5-207ENST00000533889 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.3■■□□□ 1
CAPN5-207ENST00000533889 ZBTB21Q9ULJ3 1066 aa21.3■■□□□ 1
CAPN5-207ENST00000533889 MGAMO43451 1857 aa21.3■■□□□ 1
CAPN5-207ENST00000533889 PDE6AP16499 860 aa21.29■■□□□ 1
CAPN5-207ENST00000533889 SHROOM1Q2M3G4 852 aaPredicted RBP21.29■■□□□ 1
CAPN5-207ENST00000533889 TTC6Q86TZ1 520 aa21.29■■□□□ 1
CAPN5-207ENST00000533889 ASCC2Q9H1I8 757 aaPredicted RBP21.29■■□□□ 1
CAPN5-207ENST00000533889 BRCA2P51587 3418 aa21.29■■□□□ 1
CAPN5-207ENST00000533889 MYH1P12882 1939 aa21.28■■□□□ 1
CAPN5-207ENST00000533889 C19orf81C9J6K1 198 aa21.28■■□□□ 1
CAPN5-207ENST00000533889 USP17L10C9JJH3 530 aa21.28■■□□□ 1
CAPN5-207ENST00000533889 FLT3LGP49771 235 aa21.28■■□□□ 1
CAPN5-207ENST00000533889 UBXN2AP68543 259 aa21.28■■□□□ 1
CAPN5-207ENST00000533889 FAM110CQ1W6H9 321 aa21.28■■□□□ 1
CAPN5-207ENST00000533889 SLAIN1Q8ND83 568 aa21.28■■□□□ 1
CAPN5-207ENST00000533889 COA7Q96BR5 231 aa21.28■■□□□ 1
CAPN5-207ENST00000533889 RIOK1Q9BRS2 568 aaKnown RBP21.28■■□□□ 1
CAPN5-207ENST00000533889 SERPINB13Q9UIV8 391 aa21.28■■□□□ 1
CAPN5-207ENST00000533889 MKI67P46013 3256 aaKnown RBP21.28■■□□□ 1
CAPN5-207ENST00000533889 ADCY3O60266 1144 aa21.27■■□□□ 1
CAPN5-207ENST00000533889 POLR3DP05423 398 aaPredicted RBP21.27■■□□□ 1
CAPN5-207ENST00000533889 IRX3P78415 501 aaPredicted RBP21.27■■□□□ 1
CAPN5-207ENST00000533889 CRNKL1Q9BZJ0 848 aaKnown RBP21.27■■□□□ 1
CAPN5-207ENST00000533889 TAOK2Q9UL54 1235 aa21.27■■□□□ 1
CAPN5-207ENST00000533889 LOC285556D6RIA3 1793 aa21.27■■□□□ 1
CAPN5-207ENST00000533889 ZNF532Q9HCE3 1301 aa21.27■□□□□ 0.99
CAPN5-207ENST00000533889 GH2P01242 217 aa21.26■□□□□ 0.99
CAPN5-207ENST00000533889 CCL5P13501 91 aa21.26■□□□□ 0.99
CAPN5-207ENST00000533889 TATDN1Q6P1N9 297 aa21.26■□□□□ 0.99
CAPN5-207ENST00000533889 EDC3Q96F86 508 aaKnown RBP21.26■□□□□ 0.99
CAPN5-207ENST00000533889 RNF208Q9H0X6 261 aa21.26■□□□□ 0.99
CAPN5-207ENST00000533889 EHD4Q9H223 541 aa21.26■□□□□ 0.99
CAPN5-207ENST00000533889 BOLA2Q9H3K6 86 aa21.26■□□□□ 0.99
CAPN5-207ENST00000533889 ATP5JP18859 108 aa21.25■□□□□ 0.99
CAPN5-207ENST00000533889 CERKLQ49MI3 558 aaPredicted RBP21.25■□□□□ 0.99
CAPN5-207ENST00000533889 LRRCC1Q9C099 1032 aa21.25■□□□□ 0.99
CAPN5-207ENST00000533889 PAG1Q9NWQ8 432 aa21.25■□□□□ 0.99
CAPN5-207ENST00000533889 ELNP15502 786 aa21.24■□□□□ 0.99
CAPN5-207ENST00000533889 HOXA7P31268 230 aaPredicted RBP21.24■□□□□ 0.99
CAPN5-207ENST00000533889 PLCD1P51178 756 aa21.24■□□□□ 0.99
CAPN5-207ENST00000533889 RAB3GAP1Q15042 981 aa21.24■□□□□ 0.99
CAPN5-207ENST00000533889 NKX2-3Q8TAU0 364 aa21.24■□□□□ 0.99
CAPN5-207ENST00000533889 P2RX7Q99572 595 aaKnown RBP21.24■□□□□ 0.99
CAPN5-207ENST00000533889 FEZ1Q99689 392 aa21.24■□□□□ 0.99
CAPN5-207ENST00000533889 TCRBV5S4A2TA0A5A2 114 aa21.23■□□□□ 0.99
CAPN5-207ENST00000533889 GJB1P08034 283 aa21.23■□□□□ 0.99
CAPN5-207ENST00000533889 IRF5Q13568 498 aa21.23■□□□□ 0.99
CAPN5-207ENST00000533889 ABCB5Q2M3G0 1257 aa21.23■□□□□ 0.99
CAPN5-207ENST00000533889 USP17L2Q6R6M4 530 aa21.23■□□□□ 0.99
CAPN5-207ENST00000533889 PXYLP1Q8TE99 480 aa21.23■□□□□ 0.99
CAPN5-207ENST00000533889 CABP5Q9NP86 173 aa21.23■□□□□ 0.99
CAPN5-207ENST00000533889 MCM9Q9NXL9 1143 aa21.23■□□□□ 0.99
CAPN5-207ENST00000533889 SMARCA5O60264 1052 aaPredicted RBP21.22■□□□□ 0.99
CAPN5-207ENST00000533889 LCORLQ8N3X6 602 aa21.22■□□□□ 0.99
CAPN5-207ENST00000533889 HAUS7Q99871 368 aa21.22■□□□□ 0.99
CAPN5-207ENST00000533889 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.22■□□□□ 0.99
CAPN5-207ENST00000533889 EMILIN3Q9NT22 766 aa21.22■□□□□ 0.99
CAPN5-207ENST00000533889 SLC34A2O95436 690 aa21.21■□□□□ 0.99
CAPN5-207ENST00000533889 INHAP05111 366 aa21.21■□□□□ 0.99
CAPN5-207ENST00000533889 GJA8P48165 433 aa21.21■□□□□ 0.99
CAPN5-207ENST00000533889 HERVK_113P62684 666 aa21.21■□□□□ 0.99
CAPN5-207ENST00000533889 ZYXQ15942 572 aaKnown RBP21.21■□□□□ 0.99
CAPN5-207ENST00000533889 SDR42E1Q8WUS8 393 aa21.21■□□□□ 0.99
CAPN5-207ENST00000533889 UNC93B1Q9H1C4 597 aa21.21■□□□□ 0.99
CAPN5-207ENST00000533889 ARMT1Q9H993 441 aa21.21■□□□□ 0.99
CAPN5-207ENST00000533889 MORF4L1Q9UBU8 362 aa21.21■□□□□ 0.99
CAPN5-207ENST00000533889 SHMT1P34896 483 aa21.2■□□□□ 0.98
CAPN5-207ENST00000533889 ADD2P35612 726 aa21.2■□□□□ 0.98
CAPN5-207ENST00000533889 GPRC5AQ8NFJ5 357 aa21.2■□□□□ 0.98
CAPN5-207ENST00000533889 SHISA4Q96DD7 197 aa21.2■□□□□ 0.98
CAPN5-207ENST00000533889 DCP1AQ9NPI6 582 aaPredicted RBP21.2■□□□□ 0.98
CAPN5-207ENST00000533889 DOCK3Q8IZD9 2030 aa21.19■□□□□ 0.98
CAPN5-207ENST00000533889 MPHOSPH10O00566 681 aaKnown RBP21.19■□□□□ 0.98
CAPN5-207ENST00000533889 USP14P54578 494 aa21.19■□□□□ 0.98
CAPN5-207ENST00000533889 SLFNL1Q499Z3 407 aa21.19■□□□□ 0.98
CAPN5-207ENST00000533889 CCAR1Q8IX12 1150 aaKnown RBP21.19■□□□□ 0.98
CAPN5-207ENST00000533889 U2AF1L4Q8WU68 220 aaKnown RBP21.19■□□□□ 0.98
CAPN5-207ENST00000533889 GCC1Q96CN9 775 aa21.19■□□□□ 0.98
CAPN5-207ENST00000533889 PEX10O60683 326 aa21.18■□□□□ 0.98
CAPN5-207ENST00000533889 MBD4O95243 580 aa21.18■□□□□ 0.98
CAPN5-207ENST00000533889 ACER1Q8TDN7 264 aa21.18■□□□□ 0.98
CAPN5-207ENST00000533889 PAGR1Q9BTK6 254 aa21.18■□□□□ 0.98
CAPN5-207ENST00000533889 NAV1Q8NEY1 1877 aa21.18■□□□□ 0.98
CAPN5-207ENST00000533889 USP17L15C9J2P7 530 aa21.17■□□□□ 0.98
CAPN5-207ENST00000533889 USP17L13C9JLJ4 530 aa21.17■□□□□ 0.98
CAPN5-207ENST00000533889 USP17L11C9JVI0 530 aa21.17■□□□□ 0.98
CAPN5-207ENST00000533889 USP17L18D6R9N7 530 aa21.17■□□□□ 0.98
CAPN5-207ENST00000533889 USP17L22D6RA61 530 aa21.17■□□□□ 0.98
CAPN5-207ENST00000533889 USP17L17D6RBQ6 530 aa21.17■□□□□ 0.98
CAPN5-207ENST00000533889 USP17L19D6RCP7 530 aa21.17■□□□□ 0.98
CAPN5-207ENST00000533889 USP17L20D6RJB6 530 aa21.17■□□□□ 0.98
CAPN5-207ENST00000533889 PRKAB2O43741 272 aa21.17■□□□□ 0.98
CAPN5-207ENST00000533889 CYP2D6P10635 497 aa21.17■□□□□ 0.98
CAPN5-207ENST00000533889 EVX2Q03828 476 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms