RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 LBHD1Q9BQE6 289 aaPredicted RBP15.33■□□□□ 0.04
SVIP-205ENST00000533774 GNL3LQ9NVN8 582 aaKnown RBP15.33■□□□□ 0.04
SVIP-205ENST00000533774 FLRT1Q9NZU1 646 aa15.33■□□□□ 0.04
SVIP-205ENST00000533774 GPR75-ASB3A0A0A6YYF3 556 aa15.32■□□□□ 0.04
SVIP-205ENST00000533774 SEMA3EO15041 775 aa15.32■□□□□ 0.04
SVIP-205ENST00000533774 HOXA7P31268 230 aaPredicted RBP15.32■□□□□ 0.04
SVIP-205ENST00000533774 IRX3P78415 501 aaPredicted RBP15.32■□□□□ 0.04
SVIP-205ENST00000533774 MTMR2Q13614 643 aa15.32■□□□□ 0.04
SVIP-205ENST00000533774 CCDC102BQ68D86 513 aa15.32■□□□□ 0.04
SVIP-205ENST00000533774 GPR142Q7Z601 462 aa15.32■□□□□ 0.04
SVIP-205ENST00000533774 DZIP1Q86YF9 867 aaKnown RBP15.32■□□□□ 0.04
SVIP-205ENST00000533774 MRPL50Q8N5N7 158 aaKnown RBP15.32■□□□□ 0.04
SVIP-205ENST00000533774 GPRC5AQ8NFJ5 357 aa15.32■□□□□ 0.04
SVIP-205ENST00000533774 SOCS4Q8WXH5 440 aa15.32■□□□□ 0.04
SVIP-205ENST00000533774 ABCF2Q9UG63 623 aa15.32■□□□□ 0.04
SVIP-205ENST00000533774 NCOR1O75376 2440 aa15.32■□□□□ 0.04
SVIP-205ENST00000533774 RTP1P59025 263 aa15.31■□□□□ 0.04
SVIP-205ENST00000533774 ERVK-9P63128 1117 aa15.31■□□□□ 0.04
SVIP-205ENST00000533774 ERVK-24P63145 666 aa15.31■□□□□ 0.04
SVIP-205ENST00000533774 MECOMQ03112 1051 aa15.31■□□□□ 0.04
SVIP-205ENST00000533774 TRMT44Q8IYL2 757 aaKnown RBP15.31■□□□□ 0.04
SVIP-205ENST00000533774 USP38Q8NB14 1042 aa15.31■□□□□ 0.04
SVIP-205ENST00000533774 WDR18Q9BV38 432 aa15.31■□□□□ 0.04
SVIP-205ENST00000533774 CEP126Q9P2H0 1117 aa15.31■□□□□ 0.04
SVIP-205ENST00000533774 MAPK4P31152 587 aa15.3■□□□□ 0.04
SVIP-205ENST00000533774 RGS2P41220 211 aa15.3■□□□□ 0.04
SVIP-205ENST00000533774 BACE1P56817 501 aa15.3■□□□□ 0.04
SVIP-205ENST00000533774 APBA2Q99767 749 aa15.3■□□□□ 0.04
SVIP-205ENST00000533774 TBC1D2Q9BYX2 928 aa15.3■□□□□ 0.04
SVIP-205ENST00000533774 ZNFX1Q9P2E3 1918 aaKnown RBP15.3■□□□□ 0.04
SVIP-205ENST00000533774 PA2G4Q9UQ80 394 aaKnown RBP15.3■□□□□ 0.04
SVIP-205ENST00000533774 CNMDO75829 334 aa15.29■□□□□ 0.04
SVIP-205ENST00000533774 CIAO1O76071 339 aa15.29■□□□□ 0.04
SVIP-205ENST00000533774 PDE3AQ14432 1141 aa15.29■□□□□ 0.04
SVIP-205ENST00000533774 PLEKHH3Q7Z736 793 aa15.29■□□□□ 0.04
SVIP-205ENST00000533774 ZGPATQ8N5A5 531 aaKnown RBP15.29■□□□□ 0.04
SVIP-205ENST00000533774 TRPV1Q8NER1 839 aa15.29■□□□□ 0.04
SVIP-205ENST00000533774 PAGR1Q9BTK6 254 aa15.29■□□□□ 0.04
SVIP-205ENST00000533774 DNAJC18Q9H819 358 aa15.29■□□□□ 0.04
SVIP-205ENST00000533774 NDUFB9Q9Y6M9 179 aa15.29■□□□□ 0.04
SVIP-205ENST00000533774 PDS5AQ29RF7 1337 aaKnown RBP15.28■□□□□ 0.04
SVIP-205ENST00000533774 FOSL2P15408 326 aa15.28■□□□□ 0.04
SVIP-205ENST00000533774 TIMM10P62072 90 aa15.28■□□□□ 0.04
SVIP-205ENST00000533774 MAP2K5Q13163 448 aa15.28■□□□□ 0.04
SVIP-205ENST00000533774 BADQ92934 168 aa15.28■□□□□ 0.04
SVIP-205ENST00000533774 AS3MTQ9HBK9 375 aa15.28■□□□□ 0.04
SVIP-205ENST00000533774 ATP11BQ9Y2G3 1177 aa15.28■□□□□ 0.04
SVIP-205ENST00000533774 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.28■□□□□ 0.04
SVIP-205ENST00000533774 MYH1P12882 1939 aa15.27■□□□□ 0.04
SVIP-205ENST00000533774 IGHA2P01877 340 aa15.27■□□□□ 0.04
SVIP-205ENST00000533774 SMAD3P84022 425 aaKnown RBP15.27■□□□□ 0.04
SVIP-205ENST00000533774 PI16Q6UXB8 463 aa15.27■□□□□ 0.04
SVIP-205ENST00000533774 SH3RF1Q7Z6J0 888 aa15.27■□□□□ 0.04
SVIP-205ENST00000533774 SLF2Q8IX21 1173 aa15.27■□□□□ 0.04
SVIP-205ENST00000533774 EMILIN3Q9NT22 766 aa15.27■□□□□ 0.04
SVIP-205ENST00000533774 DDX20Q9UHI6 824 aaKnown RBP15.27■□□□□ 0.04
SVIP-205ENST00000533774 PLXNA1Q9UIW2 1896 aa15.27■□□□□ 0.03
SVIP-205ENST00000533774 TCF20Q9UGU0 1960 aaKnown RBP15.26■□□□□ 0.03
SVIP-205ENST00000533774 TRIM43BA6NCK2 446 aa15.26■□□□□ 0.03
SVIP-205ENST00000533774 GJC2Q5T442 439 aaPredicted RBP15.26■□□□□ 0.03
SVIP-205ENST00000533774 SPTY2D1Q68D10 685 aaPredicted RBP15.26■□□□□ 0.03
SVIP-205ENST00000533774 TBC1D9Q6ZT07 1266 aa15.26■□□□□ 0.03
SVIP-205ENST00000533774 ERICH6Q7L0X2 663 aa15.26■□□□□ 0.03
SVIP-205ENST00000533774 NPLOC4Q8TAT6 608 aa15.26■□□□□ 0.03
SVIP-205ENST00000533774 LPAR1Q92633 364 aa15.26■□□□□ 0.03
SVIP-205ENST00000533774 SYMPKQ92797 1274 aaKnown RBP15.26■□□□□ 0.03
SVIP-205ENST00000533774 TRIM43Q96BQ3 446 aaPredicted RBP15.26■□□□□ 0.03
SVIP-205ENST00000533774 NSUN4Q96CB9 384 aaKnown RBP15.26■□□□□ 0.03
SVIP-205ENST00000533774 EDC3Q96F86 508 aaKnown RBP15.26■□□□□ 0.03
SVIP-205ENST00000533774 TMOD4Q9NZQ9 345 aa15.26■□□□□ 0.03
SVIP-205ENST00000533774 TNFRSF10AO00220 468 aa15.25■□□□□ 0.03
SVIP-205ENST00000533774 DNM1LO00429 736 aa15.25■□□□□ 0.03
SVIP-205ENST00000533774 GDF11O95390 407 aa15.25■□□□□ 0.03
SVIP-205ENST00000533774 ITGB8P26012 769 aa15.25■□□□□ 0.03
SVIP-205ENST00000533774 CYP2C19P33261 490 aa15.25■□□□□ 0.03
SVIP-205ENST00000533774 IL15P40933 162 aaPredicted RBP15.25■□□□□ 0.03
SVIP-205ENST00000533774 EPHB4P54760 987 aa15.25■□□□□ 0.03
SVIP-205ENST00000533774 SLC39A5Q6ZMH5 540 aa15.25■□□□□ 0.03
SVIP-205ENST00000533774 SH3RF3Q8TEJ3 882 aaPredicted RBP15.25■□□□□ 0.03
SVIP-205ENST00000533774 PDLIM7Q9NR12 457 aa15.25■□□□□ 0.03
SVIP-205ENST00000533774 PRKAG2Q9UGJ0 569 aa15.25■□□□□ 0.03
SVIP-205ENST00000533774 HERC5Q9UII4 1024 aaKnown RBP15.25■□□□□ 0.03
SVIP-205ENST00000533774 C19orf81C9J6K1 198 aa15.24■□□□□ 0.03
SVIP-205ENST00000533774 USP17L10C9JJH3 530 aa15.24■□□□□ 0.03
SVIP-205ENST00000533774 CNGA1P29973 690 aa15.24■□□□□ 0.03
SVIP-205ENST00000533774 GRIN2CQ14957 1233 aa15.24■□□□□ 0.03
SVIP-205ENST00000533774 TRIM60Q495X7 471 aa15.24■□□□□ 0.03
SVIP-205ENST00000533774 TJAP1Q5JTD0 557 aa15.24■□□□□ 0.03
SVIP-205ENST00000533774 MFSD14CQ5VZR4 134 aa15.24■□□□□ 0.03
SVIP-205ENST00000533774 TEX11Q8IYF3 940 aa15.24■□□□□ 0.03
SVIP-205ENST00000533774 XAGE2Q96GT9 111 aa15.24■□□□□ 0.03
SVIP-205ENST00000533774 PRDM5Q9NQX1 630 aaPredicted RBP15.24■□□□□ 0.03
SVIP-205ENST00000533774 HMG20BQ9P0W2 317 aa15.24■□□□□ 0.03
SVIP-205ENST00000533774 PTPRCP08575 1304 aa15.23■□□□□ 0.03
SVIP-205ENST00000533774 ZNF236Q9UL36 1845 aa15.23■□□□□ 0.03
SVIP-205ENST00000533774 ASNSP08243 561 aa15.23■□□□□ 0.03
SVIP-205ENST00000533774 CYBAP13498 195 aa15.23■□□□□ 0.03
SVIP-205ENST00000533774 PTPREP23469 700 aa15.23■□□□□ 0.03
SVIP-205ENST00000533774 SNX17Q15036 470 aa15.23■□□□□ 0.03
SVIP-205ENST00000533774 ANO1Q5XXA6 986 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms