RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 PLXNA1Q9UIW2 1896 aa11.39□□□□□ -0.59
PACS1-213ENST00000533756 PHIPQ8WWQ0 1821 aa11.39□□□□□ -0.59
PACS1-213ENST00000533756 LRRC37A2A6NM11 1700 aa11.38□□□□□ -0.59
PACS1-213ENST00000533756 C19orf67A6NJJ6 358 aa11.38□□□□□ -0.59
PACS1-213ENST00000533756 FRAT2O75474 233 aaPredicted RBP11.38□□□□□ -0.59
PACS1-213ENST00000533756 GLRX3O76003 335 aaKnown RBP11.38□□□□□ -0.59
PACS1-213ENST00000533756 HOXA7P31268 230 aaPredicted RBP11.38□□□□□ -0.59
PACS1-213ENST00000533756 HMGCS2P54868 508 aa11.38□□□□□ -0.59
PACS1-213ENST00000533756 IRX3P78415 501 aaPredicted RBP11.38□□□□□ -0.59
PACS1-213ENST00000533756 ATP2B2Q01814 1243 aa11.38□□□□□ -0.59
PACS1-213ENST00000533756 TMEM240Q5SV17 173 aa11.38□□□□□ -0.59
PACS1-213ENST00000533756 ZFPM1Q8IX07 1006 aa11.38□□□□□ -0.59
PACS1-213ENST00000533756 SLC44A5Q8NCS7 719 aa11.38□□□□□ -0.59
PACS1-213ENST00000533756 HLA-CQ95604 372 aa11.38□□□□□ -0.59
PACS1-213ENST00000533756 TOX2Q96NM4 488 aa11.38□□□□□ -0.59
PACS1-213ENST00000533756 TXNRD2Q9NNW7 524 aa11.38□□□□□ -0.59
PACS1-213ENST00000533756 CNNM1Q9NRU3 951 aa11.38□□□□□ -0.59
PACS1-213ENST00000533756 FLRT1Q9NZU1 646 aa11.38□□□□□ -0.59
PACS1-213ENST00000533756 RBPJLQ9UBG7 517 aa11.38□□□□□ -0.59
PACS1-213ENST00000533756 USP34Q70CQ2 3546 aa11.38□□□□□ -0.59
PACS1-213ENST00000533756 ENTPD3O75355 529 aa11.37□□□□□ -0.59
PACS1-213ENST00000533756 TIMP1P01033 207 aa11.37□□□□□ -0.59
PACS1-213ENST00000533756 HOXC6P09630 235 aa11.37□□□□□ -0.59
PACS1-213ENST00000533756 HERVK_113P62684 666 aa11.37□□□□□ -0.59
PACS1-213ENST00000533756 ERVK-9P63128 1117 aa11.37□□□□□ -0.59
PACS1-213ENST00000533756 ERVK-24P63145 666 aa11.37□□□□□ -0.59
PACS1-213ENST00000533756 PPIGQ13427 754 aaKnown RBP eCLIP11.37□□□□□ -0.59
PACS1-213ENST00000533756 Q3C1V9 767 aa11.37□□□□□ -0.59
PACS1-213ENST00000533756 C16orf59Q7L2K0 433 aa11.37□□□□□ -0.59
PACS1-213ENST00000533756 CCDC84Q86UT8 332 aaPredicted RBP11.37□□□□□ -0.59
PACS1-213ENST00000533756 GTF3C2Q8WUA4 911 aaPredicted RBP11.37□□□□□ -0.59
PACS1-213ENST00000533756 FERMT2Q96AC1 680 aa11.37□□□□□ -0.59
PACS1-213ENST00000533756 PORCNQ9H237 461 aa11.37□□□□□ -0.59
PACS1-213ENST00000533756 NKX2-4Q9H2Z4 354 aa11.37□□□□□ -0.59
PACS1-213ENST00000533756 IQSEC3Q9UPP2 1182 aaPredicted RBP11.37□□□□□ -0.59
PACS1-213ENST00000533756 FARP1Q9Y4F1 1045 aaPredicted RBP11.37□□□□□ -0.59
PACS1-213ENST00000533756 WDFY4Q6ZS81 3184 aa11.36□□□□□ -0.59
PACS1-213ENST00000533756 LOC285556D6RIA3 1793 aa11.36□□□□□ -0.59
PACS1-213ENST00000533756 GTPBP6O43824 516 aaPredicted RBP11.36□□□□□ -0.59
PACS1-213ENST00000533756 IGHA2P01877 340 aa11.36□□□□□ -0.59
PACS1-213ENST00000533756 CYBAP13498 195 aa11.36□□□□□ -0.59
PACS1-213ENST00000533756 CAVIN4Q5BKX8 364 aa11.36□□□□□ -0.59
PACS1-213ENST00000533756 MFSD5Q6N075 450 aa11.36□□□□□ -0.59
PACS1-213ENST00000533756 ERMP1Q7Z2K6 904 aa11.36□□□□□ -0.59
PACS1-213ENST00000533756 GJD3Q8N144 294 aa11.36□□□□□ -0.59
PACS1-213ENST00000533756 TRPV1Q8NER1 839 aa11.36□□□□□ -0.59
PACS1-213ENST00000533756 PHOX2BQ99453 314 aa11.36□□□□□ -0.59
PACS1-213ENST00000533756 IDI2Q9BXS1 227 aa11.36□□□□□ -0.59
PACS1-213ENST00000533756 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.36□□□□□ -0.59
PACS1-213ENST00000533756 CWC22Q9HCG8 908 aaKnown RBP11.36□□□□□ -0.59
PACS1-213ENST00000533756 USP40Q9NVE5 1235 aa11.36□□□□□ -0.59
PACS1-213ENST00000533756 PHF24Q9UPV7 400 aa11.36□□□□□ -0.59
PACS1-213ENST00000533756 MTCH2Q9Y6C9 303 aa11.36□□□□□ -0.59
PACS1-213ENST00000533756 DOCK1Q14185 1865 aa11.36□□□□□ -0.59
PACS1-213ENST00000533756 SLC15A5A6NIM6 579 aa11.35□□□□□ -0.59
PACS1-213ENST00000533756 SEPT4O43236 478 aa11.35□□□□□ -0.59
PACS1-213ENST00000533756 TBC1D12O60347 775 aa11.35□□□□□ -0.59
PACS1-213ENST00000533756 PEX10O60683 326 aa11.35□□□□□ -0.59
PACS1-213ENST00000533756 SLC5A1P13866 664 aa11.35□□□□□ -0.59
PACS1-213ENST00000533756 CYP2C19P33261 490 aa11.35□□□□□ -0.59
PACS1-213ENST00000533756 FOXO4P98177 505 aa11.35□□□□□ -0.59
PACS1-213ENST00000533756 FAAP100Q0VG06 881 aa11.35□□□□□ -0.59
PACS1-213ENST00000533756 LRRC41Q15345 812 aa11.35□□□□□ -0.59
PACS1-213ENST00000533756 CCDC57Q2TAC2 916 aa11.35□□□□□ -0.59
PACS1-213ENST00000533756 TAF7LQ5H9L4 462 aa11.35□□□□□ -0.59
PACS1-213ENST00000533756 CCDC30Q5VVM6 783 aa11.35□□□□□ -0.59
PACS1-213ENST00000533756 PSRC1Q6PGN9 363 aaPredicted RBP11.35□□□□□ -0.59
PACS1-213ENST00000533756 ANKRD33Q7Z3H0 272 aa11.35□□□□□ -0.59
PACS1-213ENST00000533756 ZSCAN29Q8IWY8 852 aaPredicted RBP11.35□□□□□ -0.59
PACS1-213ENST00000533756 OSBPL5Q9H0X9 879 aaPredicted RBP11.35□□□□□ -0.59
PACS1-213ENST00000533756 MYH16Q9H6N6 1097 aa11.35□□□□□ -0.59
PACS1-213ENST00000533756 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.35□□□□□ -0.59
PACS1-213ENST00000533756 ZNF521Q96K83 1311 aa11.35□□□□□ -0.59
PACS1-213ENST00000533756 DCDC2CA8MYV0 355 aa11.34□□□□□ -0.59
PACS1-213ENST00000533756 PQBP1O60828 265 aaKnown RBP11.34□□□□□ -0.59
PACS1-213ENST00000533756 RGS3P49796 1198 aa11.34□□□□□ -0.59
PACS1-213ENST00000533756 ZNF365Q70YC5 407 aa11.34□□□□□ -0.59
PACS1-213ENST00000533756 SH3BP5LQ7L8J4 393 aa11.34□□□□□ -0.59
PACS1-213ENST00000533756 ZNF594Q96JF6 807 aaPredicted RBP11.34□□□□□ -0.59
PACS1-213ENST00000533756 MTIF3Q9H2K0 278 aaKnown RBP11.34□□□□□ -0.59
PACS1-213ENST00000533756 AS3MTQ9HBK9 375 aa11.34□□□□□ -0.59
PACS1-213ENST00000533756 YBX2Q9Y2T7 364 aaKnown RBP11.34□□□□□ -0.59
PACS1-213ENST00000533756 CHMP3Q9Y3E7 222 aa11.34□□□□□ -0.59
PACS1-213ENST00000533756 CHD7Q9P2D1 2997 aa11.34□□□□□ -0.59
PACS1-213ENST00000533756 MYO9BQ13459 2157 aa11.33□□□□□ -0.6
PACS1-213ENST00000533756 USP17L5A8MUK1 530 aa11.33□□□□□ -0.6
PACS1-213ENST00000533756 ELL2O00472 640 aaPredicted RBP11.33□□□□□ -0.6
PACS1-213ENST00000533756 PTPREP23469 700 aa11.33□□□□□ -0.6
PACS1-213ENST00000533756 CCNA1P78396 465 aa11.33□□□□□ -0.6
PACS1-213ENST00000533756 PPP2R2DQ66LE6 453 aa11.33□□□□□ -0.6
PACS1-213ENST00000533756 FAM178BQ8IXR5 827 aa11.33□□□□□ -0.6
PACS1-213ENST00000533756 TMEM199Q8N511 208 aa11.33□□□□□ -0.6
PACS1-213ENST00000533756 MFSD14AQ96MC6 490 aa11.33□□□□□ -0.6
PACS1-213ENST00000533756 MBIPQ9NS73 344 aa11.33□□□□□ -0.6
PACS1-213ENST00000533756 TRIM35Q9UPQ4 493 aa11.33□□□□□ -0.6
PACS1-213ENST00000533756 DOCK2Q92608 1830 aa11.32□□□□□ -0.6
PACS1-213ENST00000533756 CFAP54Q96N23 3096 aa11.32□□□□□ -0.6
PACS1-213ENST00000533756 POTEB3A0JP26 581 aa11.32□□□□□ -0.6
PACS1-213ENST00000533756 DDTLA6NHG4 134 aaPredicted RBP11.32□□□□□ -0.6
PACS1-213ENST00000533756 PTPN5P54829 565 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms