RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 DMRTB1Q96MA1 342 aa9.65□□□□□ -0.86
CASP4-212ENST00000533730 PIM2Q9P1W9 311 aa9.65□□□□□ -0.86
CASP4-212ENST00000533730 SERTAD1Q9UHV2 236 aa9.65□□□□□ -0.86
CASP4-212ENST00000533730 WWC3Q9ULE0 1092 aa9.65□□□□□ -0.86
CASP4-212ENST00000533730 MAP3K2Q9Y2U5 619 aa9.65□□□□□ -0.86
CASP4-212ENST00000533730 ARFGEF2Q9Y6D5 1785 aa9.65□□□□□ -0.87
CASP4-212ENST00000533730 PTPRCP08575 1304 aa9.64□□□□□ -0.87
CASP4-212ENST00000533730 SH3TC1Q8TE82 1336 aa9.64□□□□□ -0.87
CASP4-212ENST00000533730 KLRG2A4D1S0 409 aaPredicted RBP9.64□□□□□ -0.87
CASP4-212ENST00000533730 FAM177BA6PVY3 158 aa9.64□□□□□ -0.87
CASP4-212ENST00000533730 SOBPA7XYQ1 873 aa9.64□□□□□ -0.87
CASP4-212ENST00000533730 TNFRSF10BO14763 440 aa9.64□□□□□ -0.87
CASP4-212ENST00000533730 GRIN3BO60391 1043 aa9.64□□□□□ -0.87
CASP4-212ENST00000533730 DPEP1P16444 411 aa9.64□□□□□ -0.87
CASP4-212ENST00000533730 FANCCQ00597 558 aa9.64□□□□□ -0.87
CASP4-212ENST00000533730 GPR162Q16538 588 aa9.64□□□□□ -0.87
CASP4-212ENST00000533730 G2E3Q7L622 706 aa9.64□□□□□ -0.87
CASP4-212ENST00000533730 C2CD5Q86YS7 1000 aa9.64□□□□□ -0.87
CASP4-212ENST00000533730 DNAAF4Q8WXU2 420 aa9.64□□□□□ -0.87
CASP4-212ENST00000533730 NLRP3Q96P20 1036 aa9.64□□□□□ -0.87
CASP4-212ENST00000533730 FAM129BQ96TA1 746 aa9.64□□□□□ -0.87
CASP4-212ENST00000533730 MYD88Q99836 296 aa9.64□□□□□ -0.87
CASP4-212ENST00000533730 TINF2Q9BSI4 451 aa9.64□□□□□ -0.87
CASP4-212ENST00000533730 VTI1BQ9UEU0 232 aa9.64□□□□□ -0.87
CASP4-212ENST00000533730 TRMT112Q9UI30 125 aaKnown RBP9.64□□□□□ -0.87
CASP4-212ENST00000533730 ADCY9O60503 1353 aa9.63□□□□□ -0.87
CASP4-212ENST00000533730 KIAA1551Q9HCM1 1747 aa9.63□□□□□ -0.87
CASP4-212ENST00000533730 A0A0G2JLW4 131 aa9.63□□□□□ -0.87
CASP4-212ENST00000533730 FIGNL2A6NMB9 653 aa9.63□□□□□ -0.87
CASP4-212ENST00000533730 PPP1R12BO60237 982 aaPredicted RBP9.63□□□□□ -0.87
CASP4-212ENST00000533730 SORBS3O60504 671 aa9.63□□□□□ -0.87
CASP4-212ENST00000533730 DAB2P98082 770 aa9.63□□□□□ -0.87
CASP4-212ENST00000533730 FGD1P98174 961 aa9.63□□□□□ -0.87
CASP4-212ENST00000533730 PSMD2Q13200 908 aa9.63□□□□□ -0.87
CASP4-212ENST00000533730 SLC10A5Q5PT55 438 aa9.63□□□□□ -0.87
CASP4-212ENST00000533730 COX20Q5RI15 118 aa9.63□□□□□ -0.87
CASP4-212ENST00000533730 STYK1Q6J9G0 422 aa9.63□□□□□ -0.87
CASP4-212ENST00000533730 ALKBH2Q6NS38 261 aa9.63□□□□□ -0.87
CASP4-212ENST00000533730 LINS1Q8NG48 757 aa9.63□□□□□ -0.87
CASP4-212ENST00000533730 SSH1Q8WYL5 1049 aa9.63□□□□□ -0.87
CASP4-212ENST00000533730 TANGO6Q9C0B7 1094 aa9.63□□□□□ -0.87
CASP4-212ENST00000533730 SMC4Q9NTJ3 1288 aa9.63□□□□□ -0.87
CASP4-212ENST00000533730 CWC25Q9NXE8 425 aaPredicted RBP9.63□□□□□ -0.87
CASP4-212ENST00000533730 STIM2Q9P246 746 aa9.63□□□□□ -0.87
CASP4-212ENST00000533730 KIF16BQ96L93 1317 aa9.62□□□□□ -0.87
CASP4-212ENST00000533730 PCCAP05165 728 aaPredicted RBP9.62□□□□□ -0.87
CASP4-212ENST00000533730 NPR1P16066 1061 aa9.62□□□□□ -0.87
CASP4-212ENST00000533730 KCNA3P22001 575 aa9.62□□□□□ -0.87
CASP4-212ENST00000533730 CHRNA5P30532 468 aa9.62□□□□□ -0.87
CASP4-212ENST00000533730 SMTNP53814 917 aa9.62□□□□□ -0.87
CASP4-212ENST00000533730 MTFR1Q15390 333 aa9.62□□□□□ -0.87
CASP4-212ENST00000533730 DALRD3Q5D0E6 543 aaKnown RBP9.62□□□□□ -0.87
CASP4-212ENST00000533730 TBCELQ5QJ74 424 aa9.62□□□□□ -0.87
CASP4-212ENST00000533730 DPH6Q7L8W6 267 aa9.62□□□□□ -0.87
CASP4-212ENST00000533730 TTLL6Q8N841 843 aa9.62□□□□□ -0.87
CASP4-212ENST00000533730 ZBTB38Q8NAP3 1195 aaPredicted RBP9.62□□□□□ -0.87
CASP4-212ENST00000533730 RNF34Q969K3 372 aa9.62□□□□□ -0.87
CASP4-212ENST00000533730 MASTLQ96GX5 879 aa9.62□□□□□ -0.87
CASP4-212ENST00000533730 ABCC12Q96J65 1359 aa9.62□□□□□ -0.87
CASP4-212ENST00000533730 ANKRD31Q8N7Z5 1873 aa9.62□□□□□ -0.87
CASP4-212ENST00000533730 N4BP2Q86UW6 1770 aaPredicted RBP9.61□□□□□ -0.87
CASP4-212ENST00000533730 DLEC1Q9Y238 1755 aa9.61□□□□□ -0.87
CASP4-212ENST00000533730 NEURL1BA8MQ27 555 aa9.61□□□□□ -0.87
CASP4-212ENST00000533730 MAN1A2O60476 641 aa9.61□□□□□ -0.87
CASP4-212ENST00000533730 SRGNP10124 158 aa9.61□□□□□ -0.87
CASP4-212ENST00000533730 ALDH1B1P30837 517 aa9.61□□□□□ -0.87
CASP4-212ENST00000533730 RARSP54136 660 aaKnown RBP9.61□□□□□ -0.87
CASP4-212ENST00000533730 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.61□□□□□ -0.87
CASP4-212ENST00000533730 CRY2Q49AN0 593 aa9.61□□□□□ -0.87
CASP4-212ENST00000533730 RPGRQ92834 1020 aaKnown RBP9.61□□□□□ -0.87
CASP4-212ENST00000533730 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.61□□□□□ -0.87
CASP4-212ENST00000533730 BCS1LQ9Y276 419 aa9.61□□□□□ -0.87
CASP4-212ENST00000533730 CDHR2Q9BYE9 1310 aa9.6□□□□□ -0.87
CASP4-212ENST00000533730 SPATA31C2B4DYI2 1134 aa9.6□□□□□ -0.87
CASP4-212ENST00000533730 IPO8O15397 1037 aaKnown RBP9.6□□□□□ -0.87
CASP4-212ENST00000533730 ALDH1L1O75891 902 aa9.6□□□□□ -0.87
CASP4-212ENST00000533730 IGKV5-2P06315 115 aa9.6□□□□□ -0.87
CASP4-212ENST00000533730 YBX3P16989 372 aaKnown RBP eCLIP9.6□□□□□ -0.87
CASP4-212ENST00000533730 FOXK2Q01167 660 aa9.6□□□□□ -0.87
CASP4-212ENST00000533730 ATP2B2Q01814 1243 aa9.6□□□□□ -0.87
CASP4-212ENST00000533730 SOGA3Q5TF21 947 aa9.6□□□□□ -0.87
CASP4-212ENST00000533730 GIMAP6Q6P9H5 292 aa9.6□□□□□ -0.87
CASP4-212ENST00000533730 LYSMD3Q7Z3D4 306 aa9.6□□□□□ -0.87
CASP4-212ENST00000533730 ZNF295-AS1Q8N0V1 137 aa9.6□□□□□ -0.87
CASP4-212ENST00000533730 ARHGAP45Q92619 1136 aa9.6□□□□□ -0.87
CASP4-212ENST00000533730 ZNF622Q969S3 477 aaKnown RBP eCLIP9.6□□□□□ -0.87
CASP4-212ENST00000533730 RBM17Q96I25 401 aaKnown RBP9.6□□□□□ -0.87
CASP4-212ENST00000533730 API5Q9BZZ5 524 aaKnown RBP9.6□□□□□ -0.87
CASP4-212ENST00000533730 TGIF2Q9GZN2 237 aa9.6□□□□□ -0.87
CASP4-212ENST00000533730 CCSER2Q9H7U1 834 aa9.6□□□□□ -0.87
CASP4-212ENST00000533730 CAPN10Q9HC96 672 aa9.6□□□□□ -0.87
CASP4-212ENST00000533730 METTL5Q9NRN9 209 aaKnown RBP9.6□□□□□ -0.87
CASP4-212ENST00000533730 IQSEC3Q9UPP2 1182 aaPredicted RBP9.6□□□□□ -0.87
CASP4-212ENST00000533730 BRCA1P38398 1863 aaKnown RBP9.59□□□□□ -0.87
CASP4-212ENST00000533730 A6NJY4 79 aa9.59□□□□□ -0.87
CASP4-212ENST00000533730 F6X3S4 739 aa9.59□□□□□ -0.87
CASP4-212ENST00000533730 IRS4O14654 1257 aaPredicted RBP9.59□□□□□ -0.87
CASP4-212ENST00000533730 HOXA10P31260 410 aaPredicted RBP9.59□□□□□ -0.87
CASP4-212ENST00000533730 ZNF76P36508 570 aa9.59□□□□□ -0.87
CASP4-212ENST00000533730 GCKRQ14397 625 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms