RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 SH3TC2Q8TF17 1288 aa12.63□□□□□ -0.39
CAPN1-225ENST00000533704 SDR42E1Q8WUS8 393 aa12.63□□□□□ -0.39
CAPN1-225ENST00000533704 ARMC5Q96C12 935 aa12.63□□□□□ -0.39
CAPN1-225ENST00000533704 HAUS7Q99871 368 aa12.63□□□□□ -0.39
CAPN1-225ENST00000533704 TMEM106CQ9BVX2 250 aa12.63□□□□□ -0.39
CAPN1-225ENST00000533704 TBC1D2Q9BYX2 928 aa12.63□□□□□ -0.39
CAPN1-225ENST00000533704 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.63□□□□□ -0.393e-8■■■■□ 25.1
CAPN1-225ENST00000533704 ARMT1Q9H993 441 aa12.63□□□□□ -0.39
CAPN1-225ENST00000533704 MCM9Q9NXL9 1143 aa12.63□□□□□ -0.39
CAPN1-225ENST00000533704 TMOD4Q9NZQ9 345 aa12.63□□□□□ -0.39
CAPN1-225ENST00000533704 SERPINB13Q9UIV8 391 aa12.63□□□□□ -0.39
CAPN1-225ENST00000533704 PNMA3Q9UL41 463 aa12.63□□□□□ -0.39
CAPN1-225ENST00000533704 SLC45A1Q9Y2W3 748 aa12.63□□□□□ -0.39
CAPN1-225ENST00000533704 MYPNQ86TC9 1320 aa12.62□□□□□ -0.39
CAPN1-225ENST00000533704 TCRBV5S4A2TA0A5A2 114 aa12.62□□□□□ -0.39
CAPN1-225ENST00000533704 POTEFA5A3E0 1075 aa12.62□□□□□ -0.39
CAPN1-225ENST00000533704 MBD4O95243 580 aa12.62□□□□□ -0.39
CAPN1-225ENST00000533704 GNRH1P01148 92 aa12.62□□□□□ -0.39
CAPN1-225ENST00000533704 GH2P01242 217 aa12.62□□□□□ -0.39
CAPN1-225ENST00000533704 HOXD10P28358 340 aa12.62□□□□□ -0.39
CAPN1-225ENST00000533704 PABPC4Q13310 644 aaKnown RBP eCLIP12.62□□□□□ -0.39
CAPN1-225ENST00000533704 TSHZ3Q63HK5 1081 aa12.62□□□□□ -0.39
CAPN1-225ENST00000533704 METTL16Q86W50 562 aaKnown RBP12.62□□□□□ -0.39
CAPN1-225ENST00000533704 ANKRD13CQ8N6S4 541 aa12.62□□□□□ -0.39
CAPN1-225ENST00000533704 RAET1EQ8TD07 263 aa12.62□□□□□ -0.39
CAPN1-225ENST00000533704 WDR18Q9BV38 432 aa12.62□□□□□ -0.39
CAPN1-225ENST00000533704 DCTPP1Q9H773 170 aa12.62□□□□□ -0.39
CAPN1-225ENST00000533704 SRRDQ9UH36 339 aa12.62□□□□□ -0.39
CAPN1-225ENST00000533704 CHGBP05060 677 aa12.61□□□□□ -0.39
CAPN1-225ENST00000533704 ADD2P35612 726 aa12.61□□□□□ -0.39
CAPN1-225ENST00000533704 PLCD1P51178 756 aa12.61□□□□□ -0.39
CAPN1-225ENST00000533704 PRMT2P55345 433 aa12.61□□□□□ -0.39
CAPN1-225ENST00000533704 BACE1P56817 501 aa12.61□□□□□ -0.39
CAPN1-225ENST00000533704 IRX3P78415 501 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-225ENST00000533704 RAB3GAP1Q15042 981 aa12.61□□□□□ -0.39
CAPN1-225ENST00000533704 ZYXQ15942 572 aaKnown RBP12.61□□□□□ -0.39
CAPN1-225ENST00000533704 CERKLQ49MI3 558 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-225ENST00000533704 GPATCH3Q96I76 525 aa12.61□□□□□ -0.39
CAPN1-225ENST00000533704 ZNF333Q96JL9 665 aa12.61□□□□□ -0.39
CAPN1-225ENST00000533704 CRBNQ96SW2 442 aa12.61□□□□□ -0.39
CAPN1-225ENST00000533704 FEZ1Q99689 392 aa12.61□□□□□ -0.39
CAPN1-225ENST00000533704 ECHDC1Q9NTX5 307 aa12.61□□□□□ -0.39
CAPN1-225ENST00000533704 GINM1Q9NU53 330 aa12.61□□□□□ -0.39
CAPN1-225ENST00000533704 BIN2Q9UBW5 565 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-225ENST00000533704 TAOK2Q9UL54 1235 aa12.61□□□□□ -0.39
CAPN1-225ENST00000533704 PCDHB15Q9Y5E8 787 aa12.61□□□□□ -0.39
CAPN1-225ENST00000533704 USP17L10C9JJH3 530 aa12.6□□□□□ -0.39
CAPN1-225ENST00000533704 TNPO2O14787 897 aaKnown RBP12.6□□□□□ -0.39
CAPN1-225ENST00000533704 PRKAB2O43741 272 aa12.6□□□□□ -0.39
CAPN1-225ENST00000533704 CYP2D6P10635 497 aa12.6□□□□□ -0.39
CAPN1-225ENST00000533704 EVX2Q03828 476 aa12.6□□□□□ -0.39
CAPN1-225ENST00000533704 PRKCZQ05513 592 aa12.6□□□□□ -0.39
CAPN1-225ENST00000533704 ABCB5Q2M3G0 1257 aa12.6□□□□□ -0.39
CAPN1-225ENST00000533704 SH3D19Q5HYK7 790 aa12.6□□□□□ -0.39
CAPN1-225ENST00000533704 ASCC2Q9H1I8 757 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-225ENST00000533704 EHD4Q9H223 541 aa12.6□□□□□ -0.39
CAPN1-225ENST00000533704 CABP5Q9NP86 173 aa12.6□□□□□ -0.39
CAPN1-225ENST00000533704 TNRC18O15417 2968 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-225ENST00000533704 C19orf81C9J6K1 198 aa12.59□□□□□ -0.39
CAPN1-225ENST00000533704 MPHOSPH10O00566 681 aaKnown RBP12.59□□□□□ -0.39
CAPN1-225ENST00000533704 EN2P19622 333 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-225ENST00000533704 SHMT1P34896 483 aa12.59□□□□□ -0.39
CAPN1-225ENST00000533704 ZSCAN25Q6NSZ9 544 aa12.59□□□□□ -0.39
CAPN1-225ENST00000533704 TATDN1Q6P1N9 297 aa12.59□□□□□ -0.39
CAPN1-225ENST00000533704 DCP1AQ9NPI6 582 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-225ENST00000533704 GABRQQ9UN88 632 aa12.59□□□□□ -0.39
CAPN1-225ENST00000533704 HTTP42858 3142 aa12.59□□□□□ -0.39
CAPN1-225ENST00000533704 GRK4P32298 578 aa12.58□□□□□ -0.4
CAPN1-225ENST00000533704 GCLCP48506 637 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-225ENST00000533704 USP17L2Q6R6M4 530 aa12.58□□□□□ -0.4
CAPN1-225ENST00000533704 AMOTL1Q8IY63 956 aa12.58□□□□□ -0.4
CAPN1-225ENST00000533704 SLC44A5Q8NCS7 719 aa12.58□□□□□ -0.4
CAPN1-225ENST00000533704 DDRGK1Q96HY6 314 aa12.58□□□□□ -0.4
CAPN1-225ENST00000533704 ZBTB47Q9UFB7 747 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-225ENST00000533704 SLC4A4Q9Y6R1 1079 aa12.58□□□□□ -0.4
CAPN1-225ENST00000533704 CYP2D7A0A087X1C5 515 aa12.57□□□□□ -0.4
CAPN1-225ENST00000533704 PEX10O60683 326 aa12.57□□□□□ -0.4
CAPN1-225ENST00000533704 ELNP15502 786 aa12.57□□□□□ -0.4
CAPN1-225ENST00000533704 FLT3LGP49771 235 aa12.57□□□□□ -0.4
CAPN1-225ENST00000533704 UBE3CQ15386 1083 aa12.57□□□□□ -0.4
CAPN1-225ENST00000533704 MTFR1Q15390 333 aa12.57□□□□□ -0.4
CAPN1-225ENST00000533704 FAM110CQ1W6H9 321 aa12.57□□□□□ -0.4
CAPN1-225ENST00000533704 ACER1Q8TDN7 264 aa12.57□□□□□ -0.4
CAPN1-225ENST00000533704 COA7Q96BR5 231 aa12.57□□□□□ -0.4
CAPN1-225ENST00000533704 DYNLL2Q96FJ2 89 aa12.57□□□□□ -0.4
CAPN1-225ENST00000533704 P2RX7Q99572 595 aaKnown RBP12.57□□□□□ -0.4
CAPN1-225ENST00000533704 PAGR1Q9BTK6 254 aa12.57□□□□□ -0.4
CAPN1-225ENST00000533704 PUS7LQ9H0K6 701 aaKnown RBP12.57□□□□□ -0.4
CAPN1-225ENST00000533704 EMILIN3Q9NT22 766 aa12.57□□□□□ -0.4
CAPN1-225ENST00000533704 ADCY3O60266 1144 aa12.56□□□□□ -0.4
CAPN1-225ENST00000533704 HERVK_113P62684 666 aa12.56□□□□□ -0.4
CAPN1-225ENST00000533704 GABPAQ06546 454 aa12.56□□□□□ -0.4
CAPN1-225ENST00000533704 SEPT2Q15019 361 aa12.56□□□□□ -0.4
CAPN1-225ENST00000533704 KBTBD3Q8NAB2 608 aa12.56□□□□□ -0.4
CAPN1-225ENST00000533704 SLAIN1Q8ND83 568 aa12.56□□□□□ -0.4
CAPN1-225ENST00000533704 OTUD7AQ8TE49 926 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-225ENST00000533704 ATP8A2Q9NTI2 1148 aa12.56□□□□□ -0.4
CAPN1-225ENST00000533704 PLXNB2O15031 1838 aa12.55□□□□□ -0.4
CAPN1-225ENST00000533704 USP17L12C9JPN9 530 aa12.55□□□□□ -0.4
CAPN1-225ENST00000533704 USP17L21D6R901 530 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms