RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 WNK4Q96J92 1243 aa19.56■□□□□ 0.72
PACSIN3-210ENST00000533686 WDR33Q9C0J8 1336 aaKnown RBP19.55■□□□□ 0.72
PACSIN3-210ENST00000533686 PCP11498 1178 aaKnown RBP19.55■□□□□ 0.72
PACSIN3-210ENST00000533686 PTPRAP18433 802 aa19.55■□□□□ 0.72
PACSIN3-210ENST00000533686 VEGFBP49765 207 aa19.55■□□□□ 0.72
PACSIN3-210ENST00000533686 NOGQ13253 232 aa19.55■□□□□ 0.72
PACSIN3-210ENST00000533686 IMMTQ16891 758 aaKnown RBP19.55■□□□□ 0.72
PACSIN3-210ENST00000533686 ABCB5Q2M3G0 1257 aa19.55■□□□□ 0.72
PACSIN3-210ENST00000533686 OPTNQ96CV9 577 aa19.55■□□□□ 0.72
PACSIN3-210ENST00000533686 TBC1D2Q9BYX2 928 aa19.55■□□□□ 0.72
PACSIN3-210ENST00000533686 MKNK2Q9HBH9 465 aa19.55■□□□□ 0.72
PACSIN3-210ENST00000533686 CABP5Q9NP86 173 aa19.55■□□□□ 0.72
PACSIN3-210ENST00000533686 ANO2Q9NQ90 1003 aa19.55■□□□□ 0.72
PACSIN3-210ENST00000533686 OTOFQ9HC10 1997 aa19.54■□□□□ 0.72
PACSIN3-210ENST00000533686 GDF11O95390 407 aa19.54■□□□□ 0.72
PACSIN3-210ENST00000533686 JAG1P78504 1218 aa19.54■□□□□ 0.72
PACSIN3-210ENST00000533686 CTDSPL2Q05D32 466 aa19.54■□□□□ 0.72
PACSIN3-210ENST00000533686 PPIL2Q13356 520 aa19.54■□□□□ 0.72
PACSIN3-210ENST00000533686 ZBTB21Q9ULJ3 1066 aa19.54■□□□□ 0.72
PACSIN3-210ENST00000533686 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.54■□□□□ 0.72
PACSIN3-210ENST00000533686 USP17L5A8MUK1 530 aa19.53■□□□□ 0.72
PACSIN3-210ENST00000533686 ORC4O43929 436 aa19.53■□□□□ 0.72
PACSIN3-210ENST00000533686 GH2P01242 217 aa19.53■□□□□ 0.72
PACSIN3-210ENST00000533686 RASA1P20936 1047 aa19.53■□□□□ 0.72
PACSIN3-210ENST00000533686 GJA5P36382 358 aa19.53■□□□□ 0.72
PACSIN3-210ENST00000533686 MAP2K2P36507 400 aa19.53■□□□□ 0.72
PACSIN3-210ENST00000533686 NT5C2P49902 561 aa19.53■□□□□ 0.72
PACSIN3-210ENST00000533686 HAND2P61296 217 aa19.53■□□□□ 0.72
PACSIN3-210ENST00000533686 ZNF444Q8N0Y2 327 aaPredicted RBP19.53■□□□□ 0.72
PACSIN3-210ENST00000533686 STAG1Q8WVM7 1258 aa19.53■□□□□ 0.72
PACSIN3-210ENST00000533686 RNF41Q9H4P4 317 aaPredicted RBP19.53■□□□□ 0.72
PACSIN3-210ENST00000533686 ZHX2Q9Y6X8 837 aa19.53■□□□□ 0.72
PACSIN3-210ENST00000533686 LAMB1P07942 1786 aa19.52■□□□□ 0.72
PACSIN3-210ENST00000533686 EPB41L2O43491 1005 aaKnown RBP19.52■□□□□ 0.72
PACSIN3-210ENST00000533686 REC8O95072 547 aa19.52■□□□□ 0.72
PACSIN3-210ENST00000533686 AKNAD1Q5T1N1 836 aa19.52■□□□□ 0.72
PACSIN3-210ENST00000533686 TMEM179Q6ZVK1 233 aa19.52■□□□□ 0.72
PACSIN3-210ENST00000533686 STK11IPQ8N1F8 1099 aa19.52■□□□□ 0.72
PACSIN3-210ENST00000533686 CNKSR2Q8WXI2 1034 aa19.52■□□□□ 0.72
PACSIN3-210ENST00000533686 OTUD5Q96G74 571 aa19.52■□□□□ 0.72
PACSIN3-210ENST00000533686 NBPF3Q9H094 633 aa19.52■□□□□ 0.72
PACSIN3-210ENST00000533686 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.52■□□□□ 0.72
PACSIN3-210ENST00000533686 RBM8AQ9Y5S9 174 aaKnown RBP19.52■□□□□ 0.72
PACSIN3-210ENST00000533686 CXCL11O14625 94 aa19.51■□□□□ 0.71
PACSIN3-210ENST00000533686 EIF5BO60841 1220 aaKnown RBP19.51■□□□□ 0.71
PACSIN3-210ENST00000533686 PRDM1O75626 825 aa19.51■□□□□ 0.71
PACSIN3-210ENST00000533686 AKR1B1P15121 316 aa19.51■□□□□ 0.71
PACSIN3-210ENST00000533686 GUCY1A2P33402 732 aa19.51■□□□□ 0.71
PACSIN3-210ENST00000533686 GRM1Q13255 1194 aa19.51■□□□□ 0.71
PACSIN3-210ENST00000533686 SHROOM1Q2M3G4 852 aaPredicted RBP19.51■□□□□ 0.71
PACSIN3-210ENST00000533686 MFSD6Q6ZSS7 791 aa19.51■□□□□ 0.71
PACSIN3-210ENST00000533686 TBC1D10CQ8IV04 446 aa19.51■□□□□ 0.71
PACSIN3-210ENST00000533686 REM2Q8IYK8 340 aaPredicted RBP19.51■□□□□ 0.71
PACSIN3-210ENST00000533686 WDR18Q9BV38 432 aa19.51■□□□□ 0.71
PACSIN3-210ENST00000533686 AS3MTQ9HBK9 375 aa19.51■□□□□ 0.71
PACSIN3-210ENST00000533686 KCNH4Q9UQ05 1017 aa19.51■□□□□ 0.71
PACSIN3-210ENST00000533686 AFG3L2Q9Y4W6 797 aa19.51■□□□□ 0.71
PACSIN3-210ENST00000533686 TACC3Q9Y6A5 838 aa19.51■□□□□ 0.71
PACSIN3-210ENST00000533686 DOCK1Q14185 1865 aa19.5■□□□□ 0.71
PACSIN3-210ENST00000533686 MPHOSPH10O00566 681 aaKnown RBP19.5■□□□□ 0.71
PACSIN3-210ENST00000533686 IRF6O14896 467 aa19.5■□□□□ 0.71
PACSIN3-210ENST00000533686 CYP21A2P08686 494 aa19.5■□□□□ 0.71
PACSIN3-210ENST00000533686 NECTIN1Q15223 517 aa19.5■□□□□ 0.71
PACSIN3-210ENST00000533686 ZNF280CQ8ND82 737 aa19.5■□□□□ 0.71
PACSIN3-210ENST00000533686 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.5■□□□□ 0.71
PACSIN3-210ENST00000533686 MANSC4A6NHS7 340 aaPredicted RBP19.49■□□□□ 0.71
PACSIN3-210ENST00000533686 AOC2O75106 756 aa19.49■□□□□ 0.71
PACSIN3-210ENST00000533686 GTF2A2P52657 109 aa19.49■□□□□ 0.71
PACSIN3-210ENST00000533686 INHBEP58166 350 aa19.49■□□□□ 0.71
PACSIN3-210ENST00000533686 KIF23Q02241 960 aaPredicted RBP19.49■□□□□ 0.71
PACSIN3-210ENST00000533686 SNAPC2Q13487 334 aa19.49■□□□□ 0.71
PACSIN3-210ENST00000533686 SEPT2Q15019 361 aa19.49■□□□□ 0.71
PACSIN3-210ENST00000533686 RAB3GAP1Q15042 981 aa19.49■□□□□ 0.71
PACSIN3-210ENST00000533686 NEDD1Q8NHV4 660 aa19.49■□□□□ 0.71
PACSIN3-210ENST00000533686 INCENPQ9NQS7 918 aa19.49■□□□□ 0.71
PACSIN3-210ENST00000533686 TESPA1A2RU30 521 aaPredicted RBP19.48■□□□□ 0.71
PACSIN3-210ENST00000533686 MKRN3Q13064 507 aaKnown RBP19.48■□□□□ 0.71
PACSIN3-210ENST00000533686 CCDC84Q86UT8 332 aaPredicted RBP19.48■□□□□ 0.71
PACSIN3-210ENST00000533686 MS4A4AQ96JQ5 239 aa19.48■□□□□ 0.71
PACSIN3-210ENST00000533686 ZIC5Q96T25 663 aa19.48■□□□□ 0.71
PACSIN3-210ENST00000533686 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.48■□□□□ 0.71
PACSIN3-210ENST00000533686 KANSL2Q9H9L4 492 aa19.48■□□□□ 0.71
PACSIN3-210ENST00000533686 PLIN4Q96Q06 1357 aa19.47■□□□□ 0.71
PACSIN3-210ENST00000533686 IGKV6D-41A0A0C4DH26 115 aa19.47■□□□□ 0.71
PACSIN3-210ENST00000533686 TSPY3P0CV98 308 aa19.47■□□□□ 0.71
PACSIN3-210ENST00000533686 TSPY8P0CW00 308 aa19.47■□□□□ 0.71
PACSIN3-210ENST00000533686 CETPP11597 493 aa19.47■□□□□ 0.71
PACSIN3-210ENST00000533686 TM4SF4P48230 202 aa19.47■□□□□ 0.71
PACSIN3-210ENST00000533686 TFAP4Q01664 338 aa19.47■□□□□ 0.71
PACSIN3-210ENST00000533686 SREBF2Q12772 1141 aa19.47■□□□□ 0.71
PACSIN3-210ENST00000533686 SPP2Q13103 211 aa19.47■□□□□ 0.71
PACSIN3-210ENST00000533686 CREB3L3Q68CJ9 461 aa19.47■□□□□ 0.71
PACSIN3-210ENST00000533686 CNNM2Q9H8M5 875 aa19.47■□□□□ 0.71
PACSIN3-210ENST00000533686 TSPY2A6NKD2 308 aa19.46■□□□□ 0.71
PACSIN3-210ENST00000533686 C19orf81C9J6K1 198 aa19.46■□□□□ 0.71
PACSIN3-210ENST00000533686 SLC27A2O14975 620 aa19.46■□□□□ 0.71
PACSIN3-210ENST00000533686 RANBP6O60518 1105 aaKnown RBP19.46■□□□□ 0.71
PACSIN3-210ENST00000533686 BACE1P56817 501 aa19.46■□□□□ 0.71
PACSIN3-210ENST00000533686 SH3D19Q5HYK7 790 aa19.46■□□□□ 0.71
PACSIN3-210ENST00000533686 FAM47AQ5JRC9 791 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms