RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 ZBTB1Q9Y2K1 713 aa8.02□□□□□ -1.13
SOX6-216ENST00000533658 MYH14Q7Z406 1995 aaKnown RBP8.02□□□□□ -1.13
SOX6-216ENST00000533658 ZNF831Q5JPB2 1677 aa8.02□□□□□ -1.13
SOX6-216ENST00000533658 COL5A3P25940 1745 aaPredicted RBP8.01□□□□□ -1.13
SOX6-216ENST00000533658 TJP1Q07157 1748 aa8.01□□□□□ -1.13
SOX6-216ENST00000533658 PALM3A6NDB9 673 aaPredicted RBP8.01□□□□□ -1.13
SOX6-216ENST00000533658 KCNQ3O43525 872 aa8.01□□□□□ -1.13
SOX6-216ENST00000533658 DIAPH1O60610 1272 aaKnown RBP8.01□□□□□ -1.13
SOX6-216ENST00000533658 RGS9O75916 674 aaPredicted RBP8.01□□□□□ -1.13
SOX6-216ENST00000533658 CANXP27824 592 aaKnown RBP8.01□□□□□ -1.13
SOX6-216ENST00000533658 TEAD4Q15561 434 aa8.01□□□□□ -1.13
SOX6-216ENST00000533658 DALRD3Q5D0E6 543 aaKnown RBP8.01□□□□□ -1.13
SOX6-216ENST00000533658 AKAP4Q5JQC9 854 aa8.01□□□□□ -1.13
SOX6-216ENST00000533658 USPL1Q5W0Q7 1092 aa8.01□□□□□ -1.13
SOX6-216ENST00000533658 DZIP1LQ8IYY4 767 aaKnown RBP8.01□□□□□ -1.13
SOX6-216ENST00000533658 LARGE2Q8N3Y3 721 aa8.01□□□□□ -1.13
SOX6-216ENST00000533658 OGFOD1Q8N543 542 aa8.01□□□□□ -1.13
SOX6-216ENST00000533658 SMC1BQ8NDV3 1235 aa8.01□□□□□ -1.13
SOX6-216ENST00000533658 RHPN1Q8TCX5 695 aa8.01□□□□□ -1.13
SOX6-216ENST00000533658 PHACTR3Q96KR7 559 aa8.01□□□□□ -1.13
SOX6-216ENST00000533658 CEP63Q96MT8 703 aa8.01□□□□□ -1.13
SOX6-216ENST00000533658 IGFLR1Q9H665 355 aa8.01□□□□□ -1.13
SOX6-216ENST00000533658 PIM2Q9P1W9 311 aa8.01□□□□□ -1.13
SOX6-216ENST00000533658 TNRC6CQ9HCJ0 1690 aaKnown RBP8.01□□□□□ -1.13
SOX6-216ENST00000533658 ARFGEF1Q9Y6D6 1849 aa8.01□□□□□ -1.13
SOX6-216ENST00000533658 USP42Q9H9J4 1324 aaKnown RBP8.01□□□□□ -1.13
SOX6-216ENST00000533658 TGFB1P01137 390 aa8□□□□□ -1.13
SOX6-216ENST00000533658 HSPA1AP0DMV8 641 aaKnown RBP8□□□□□ -1.13
SOX6-216ENST00000533658 HSPA1BP0DMV9 641 aaKnown RBP8□□□□□ -1.13
SOX6-216ENST00000533658 CYP19A1P11511 503 aaPredicted RBP8□□□□□ -1.13
SOX6-216ENST00000533658 NOS2P35228 1153 aa8□□□□□ -1.13
SOX6-216ENST00000533658 TYRO3Q06418 890 aa8□□□□□ -1.13
SOX6-216ENST00000533658 ZNF232Q9UNY5 417 aa8□□□□□ -1.13
SOX6-216ENST00000533658 COL3A1P02461 1466 aaPredicted RBP8□□□□□ -1.13
SOX6-216ENST00000533658 CARMIL3Q8ND23 1372 aa7.99□□□□□ -1.13
SOX6-216ENST00000533658 PRAMEF22A3QJZ6 481 aa7.99□□□□□ -1.13
SOX6-216ENST00000533658 POLRMTO00411 1230 aaKnown RBP7.99□□□□□ -1.13
SOX6-216ENST00000533658 ADAMTS4O75173 837 aa7.99□□□□□ -1.13
SOX6-216ENST00000533658 NFIXQ14938 502 aa7.99□□□□□ -1.13
SOX6-216ENST00000533658 IL17REQ8NFR9 667 aa7.99□□□□□ -1.13
SOX6-216ENST00000533658 DNAJB12Q9NXW2 375 aaKnown RBP7.99□□□□□ -1.13
SOX6-216ENST00000533658 TFIP11Q9UBB9 837 aaKnown RBP7.99□□□□□ -1.13
SOX6-216ENST00000533658 SOS1Q07889 1333 aaPredicted RBP7.99□□□□□ -1.13
SOX6-216ENST00000533658 ZBTB7BO15156 539 aaPredicted RBP7.98□□□□□ -1.13
SOX6-216ENST00000533658 GSC2O15499 205 aa7.98□□□□□ -1.13
SOX6-216ENST00000533658 RASA1P20936 1047 aa7.98□□□□□ -1.13
SOX6-216ENST00000533658 CLDN10P78369 228 aa7.98□□□□□ -1.13
SOX6-216ENST00000533658 DCTN1Q14203 1278 aa7.98□□□□□ -1.13
SOX6-216ENST00000533658 SLC9A9Q8IVB4 645 aa7.98□□□□□ -1.13
SOX6-216ENST00000533658 ZNF496Q96IT1 587 aaPredicted RBP7.98□□□□□ -1.13
SOX6-216ENST00000533658 ZNF594Q96JF6 807 aaPredicted RBP7.98□□□□□ -1.13
SOX6-216ENST00000533658 SCN11AQ9UI33 1791 aa7.97□□□□□ -1.13
SOX6-216ENST00000533658 SERTM1A2A2V5 107 aa7.97□□□□□ -1.13
SOX6-216ENST00000533658 A1BGP04217 495 aa7.97□□□□□ -1.13
SOX6-216ENST00000533658 SPINK2P20155 84 aa7.97□□□□□ -1.13
SOX6-216ENST00000533658 TM4SF1P30408 202 aa7.97□□□□□ -1.13
SOX6-216ENST00000533658 PRKAR2BP31323 418 aa7.97□□□□□ -1.13
SOX6-216ENST00000533658 MCM10Q7L590 875 aa7.97□□□□□ -1.13
SOX6-216ENST00000533658 HSH2DQ96JZ2 352 aa7.97□□□□□ -1.13
SOX6-216ENST00000533658 AKTIPQ9H8T0 292 aa7.97□□□□□ -1.13
SOX6-216ENST00000533658 ADAMTS7Q9UKP4 1686 aa7.97□□□□□ -1.13
SOX6-216ENST00000533658 COL15A1P39059 1388 aa7.97□□□□□ -1.13
SOX6-216ENST00000533658 MRC1P22897 1456 aa7.96□□□□□ -1.13
SOX6-216ENST00000533658 M0R2N6 131 aa7.96□□□□□ -1.14
SOX6-216ENST00000533658 VEGFAP15692 232 aaPredicted RBP7.96□□□□□ -1.14
SOX6-216ENST00000533658 PSMA6P60900 246 aaKnown RBP7.96□□□□□ -1.14
SOX6-216ENST00000533658 TBC1D9BQ66K14 1250 aa7.96□□□□□ -1.14
SOX6-216ENST00000533658 NPM2Q86SE8 214 aaKnown RBP7.96□□□□□ -1.14
SOX6-216ENST00000533658 KRTAP9-8Q9BYQ0 159 aa7.96□□□□□ -1.14
SOX6-216ENST00000533658 MIS18AQ9NYP9 233 aa7.96□□□□□ -1.14
SOX6-216ENST00000533658 KIAA1024Q9UPX6 916 aa7.96□□□□□ -1.14
SOX6-216ENST00000533658 MAFBQ9Y5Q3 323 aaPredicted RBP7.96□□□□□ -1.14
SOX6-216ENST00000533658 GLTPD2A6NH11 291 aa7.95□□□□□ -1.14
SOX6-216ENST00000533658 GNAT3A8MTJ3 354 aa7.95□□□□□ -1.14
SOX6-216ENST00000533658 NFKBIEO00221 500 aa7.95□□□□□ -1.14
SOX6-216ENST00000533658 IGLV1-40P01703 118 aa7.95□□□□□ -1.14
SOX6-216ENST00000533658 SERPINB2P05120 415 aa7.95□□□□□ -1.14
SOX6-216ENST00000533658 U2AF1L5P0DN76 240 aaPredicted RBP7.95□□□□□ -1.14
SOX6-216ENST00000533658 LMNB1P20700 586 aa7.95□□□□□ -1.14
SOX6-216ENST00000533658 EPHA4P54764 986 aa7.95□□□□□ -1.14
SOX6-216ENST00000533658 U2AF1Q01081 240 aaKnown RBP eCLIP7.95□□□□□ -1.14
SOX6-216ENST00000533658 TEFQ10587 303 aa7.95□□□□□ -1.14
SOX6-216ENST00000533658 TBCELQ5QJ74 424 aa7.95□□□□□ -1.14
SOX6-216ENST00000533658 SH3PXD2AQ5TCZ1 1133 aa7.95□□□□□ -1.14
SOX6-216ENST00000533658 TTC5Q8N0Z6 440 aa7.95□□□□□ -1.14
SOX6-216ENST00000533658 SIX5Q8N196 739 aa7.95□□□□□ -1.14
SOX6-216ENST00000533658 PPP1R12CQ9BZL4 782 aa7.95□□□□□ -1.14
SOX6-216ENST00000533658 ANKIB1Q9P2G1 1089 aa7.95□□□□□ -1.14
SOX6-216ENST00000533658 NARFQ9UHQ1 456 aa7.95□□□□□ -1.14
SOX6-216ENST00000533658 TIAM2Q8IVF5 1701 aa7.95□□□□□ -1.14
SOX6-216ENST00000533658 SBF1O95248 1867 aa7.94□□□□□ -1.14
SOX6-216ENST00000533658 FAM177BA6PVY3 158 aa7.94□□□□□ -1.14
SOX6-216ENST00000533658 SFI1A8K8P3 1242 aa7.94□□□□□ -1.14
SOX6-216ENST00000533658 PPP2R1AP30153 589 aa7.94□□□□□ -1.14
SOX6-216ENST00000533658 SEC13P55735 322 aa7.94□□□□□ -1.14
SOX6-216ENST00000533658 GRIK5Q16478 980 aa7.94□□□□□ -1.14
SOX6-216ENST00000533658 ZNF790Q6PG37 636 aa7.94□□□□□ -1.14
SOX6-216ENST00000533658 C2CD5Q86YS7 1000 aa7.94□□□□□ -1.14
SOX6-216ENST00000533658 THUMPD2Q9BTF0 503 aaKnown RBP7.94□□□□□ -1.14
SOX6-216ENST00000533658 EFCC1Q9HA90 598 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms