RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 USP6NLQ92738 828 aa13.93□□□□□ -0.18
TRAPPC4-213ENST00000533149 APBA2Q99767 749 aa13.93□□□□□ -0.18
TRAPPC4-213ENST00000533149 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRAPPC4-213ENST00000533149 RFX7Q2KHR2 1363 aa13.93□□□□□ -0.18
TRAPPC4-213ENST00000533149 MAST2Q6P0Q8 1798 aa13.93□□□□□ -0.18
TRAPPC4-213ENST00000533149 UTYO14607 1347 aa13.93□□□□□ -0.18
TRAPPC4-213ENST00000533149 GAKO14976 1311 aa13.93□□□□□ -0.18
TRAPPC4-213ENST00000533149 USP17L5A8MUK1 530 aa13.92□□□□□ -0.18
TRAPPC4-213ENST00000533149 HOXA7P31268 230 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC4-213ENST00000533149 PICALMQ13492 652 aa13.92□□□□□ -0.18
TRAPPC4-213ENST00000533149 MVPQ14764 893 aaKnown RBP13.92□□□□□ -0.18
TRAPPC4-213ENST00000533149 MFSD14CQ5VZR4 134 aa13.92□□□□□ -0.18
TRAPPC4-213ENST00000533149 LPAR1Q92633 364 aa13.92□□□□□ -0.18
TRAPPC4-213ENST00000533149 DENND2AQ9ULE3 1009 aa13.92□□□□□ -0.18
TRAPPC4-213ENST00000533149 SEMA3EO15041 775 aa13.91□□□□□ -0.18
TRAPPC4-213ENST00000533149 SLURP2P0DP57 97 aa13.91□□□□□ -0.18
TRAPPC4-213ENST00000533149 CCL14Q16627 93 aa13.91□□□□□ -0.18
TRAPPC4-213ENST00000533149 MORN1Q5T089 497 aa13.91□□□□□ -0.18
TRAPPC4-213ENST00000533149 GPR142Q7Z601 462 aa13.91□□□□□ -0.18
TRAPPC4-213ENST00000533149 GTF3C2Q8WUA4 911 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC4-213ENST00000533149 ATXN2LQ8WWM7 1075 aaKnown RBP13.91□□□□□ -0.18
TRAPPC4-213ENST00000533149 P2RX7Q99572 595 aaKnown RBP13.91□□□□□ -0.18
TRAPPC4-213ENST00000533149 TMOD4Q9NZQ9 345 aa13.91□□□□□ -0.18
TRAPPC4-213ENST00000533149 DDX20Q9UHI6 824 aaKnown RBP13.91□□□□□ -0.18
TRAPPC4-213ENST00000533149 ATP11BQ9Y2G3 1177 aa13.91□□□□□ -0.18
TRAPPC4-213ENST00000533149 MYH13Q9UKX3 1938 aa13.91□□□□□ -0.18
TRAPPC4-213ENST00000533149 TTC28Q96AY4 2481 aa13.91□□□□□ -0.18
TRAPPC4-213ENST00000533149 NPM3O75607 178 aaKnown RBP13.9□□□□□ -0.18
TRAPPC4-213ENST00000533149 CAP2P40123 477 aa13.9□□□□□ -0.18
TRAPPC4-213ENST00000533149 HERVK_113P62684 666 aa13.9□□□□□ -0.18
TRAPPC4-213ENST00000533149 C1QBPQ07021 282 aaKnown RBP13.9□□□□□ -0.18
TRAPPC4-213ENST00000533149 MAP3K12Q12852 859 aa13.9□□□□□ -0.18
TRAPPC4-213ENST00000533149 PLEKHH3Q7Z736 793 aa13.9□□□□□ -0.18
TRAPPC4-213ENST00000533149 DZIP1Q86YF9 867 aaKnown RBP13.9□□□□□ -0.18
TRAPPC4-213ENST00000533149 ITPRIPQ8IWB1 547 aa13.9□□□□□ -0.18
TRAPPC4-213ENST00000533149 KLHDC4Q8TBB5 520 aa13.9□□□□□ -0.18
TRAPPC4-213ENST00000533149 BADQ92934 168 aa13.9□□□□□ -0.18
TRAPPC4-213ENST00000533149 FAM163AQ96GL9 167 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC4-213ENST00000533149 CWC22Q9HCG8 908 aaKnown RBP13.9□□□□□ -0.18
TRAPPC4-213ENST00000533149 TXNRD2Q9NNW7 524 aa13.9□□□□□ -0.18
TRAPPC4-213ENST00000533149 DDX4Q9NQI0 724 aaKnown RBP13.9□□□□□ -0.18
TRAPPC4-213ENST00000533149 PRDM5Q9NQX1 630 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC4-213ENST00000533149 EYSQ5T1H1 3165 aa13.9□□□□□ -0.18
TRAPPC4-213ENST00000533149 LTBP2Q14767 1821 aa13.9□□□□□ -0.18
TRAPPC4-213ENST00000533149 GLRX3O76003 335 aaKnown RBP13.9□□□□□ -0.19
TRAPPC4-213ENST00000533149 BACE1P56817 501 aa13.9□□□□□ -0.19
TRAPPC4-213ENST00000533149 ERVK-9P63128 1117 aa13.9□□□□□ -0.19
TRAPPC4-213ENST00000533149 ERVK-24P63145 666 aa13.9□□□□□ -0.19
TRAPPC4-213ENST00000533149 ANKRD44Q8N8A2 993 aa13.9□□□□□ -0.19
TRAPPC4-213ENST00000533149 ARRDC4Q8NCT1 418 aa13.9□□□□□ -0.19
TRAPPC4-213ENST00000533149 EDC3Q96F86 508 aaKnown RBP13.9□□□□□ -0.19
TRAPPC4-213ENST00000533149 RBPJLQ9UBG7 517 aa13.9□□□□□ -0.19
TRAPPC4-213ENST00000533149 DDX19BQ9UMR2 479 aa13.9□□□□□ -0.19
TRAPPC4-213ENST00000533149 C19orf81C9J6K1 198 aa13.89□□□□□ -0.19
TRAPPC4-213ENST00000533149 EYA2O00167 538 aa13.89□□□□□ -0.19
TRAPPC4-213ENST00000533149 CNGA1P29973 690 aa13.89□□□□□ -0.19
TRAPPC4-213ENST00000533149 BTDP43251 543 aa13.89□□□□□ -0.19
TRAPPC4-213ENST00000533149 MAP2K5Q13163 448 aa13.89□□□□□ -0.19
TRAPPC4-213ENST00000533149 MTMR2Q13614 643 aa13.89□□□□□ -0.19
TRAPPC4-213ENST00000533149 B4GALNT3Q6L9W6 998 aa13.89□□□□□ -0.19
TRAPPC4-213ENST00000533149 SLC39A5Q6ZMH5 540 aa13.89□□□□□ -0.19
TRAPPC4-213ENST00000533149 USP38Q8NB14 1042 aa13.89□□□□□ -0.19
TRAPPC4-213ENST00000533149 WDR18Q9BV38 432 aa13.89□□□□□ -0.19
TRAPPC4-213ENST00000533149 FAM196BA6NMK8 535 aa13.88□□□□□ -0.19
TRAPPC4-213ENST00000533149 ZBTB22O15209 634 aa13.88□□□□□ -0.19
TRAPPC4-213ENST00000533149 MAP4K4O95819 1239 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC4-213ENST00000533149 AAMPQ13685 434 aa13.88□□□□□ -0.19
TRAPPC4-213ENST00000533149 GRIN2CQ14957 1233 aa13.88□□□□□ -0.19
TRAPPC4-213ENST00000533149 Q3C1V9 767 aa13.88□□□□□ -0.19
TRAPPC4-213ENST00000533149 SPTY2D1Q68D10 685 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC4-213ENST00000533149 ADAMTS19Q8TE59 1207 aa13.88□□□□□ -0.19
TRAPPC4-213ENST00000533149 CCDC136Q96JN2 1154 aa13.88□□□□□ -0.19
TRAPPC4-213ENST00000533149 RNPC3Q96LT9 517 aaKnown RBP13.88□□□□□ -0.19
TRAPPC4-213ENST00000533149 ASB2Q96Q27 587 aa13.88□□□□□ -0.19
TRAPPC4-213ENST00000533149 PORCNQ9H237 461 aa13.88□□□□□ -0.19
TRAPPC4-213ENST00000533149 HERC5Q9UII4 1024 aaKnown RBP13.88□□□□□ -0.19
TRAPPC4-213ENST00000533149 ARIH1Q9Y4X5 557 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC4-213ENST00000533149 MYH2Q9UKX2 1941 aa13.87□□□□□ -0.19
TRAPPC4-213ENST00000533149 KBTBD13C9JR72 458 aa13.87□□□□□ -0.19
TRAPPC4-213ENST00000533149 PEX10O60683 326 aa13.87□□□□□ -0.19
TRAPPC4-213ENST00000533149 CCNA1P78396 465 aa13.87□□□□□ -0.19
TRAPPC4-213ENST00000533149 ATP2B2Q01814 1243 aa13.87□□□□□ -0.19
TRAPPC4-213ENST00000533149 ATP2B3Q16720 1220 aa13.87□□□□□ -0.19
TRAPPC4-213ENST00000533149 IL27Q8NEV9 243 aa13.87□□□□□ -0.19
TRAPPC4-213ENST00000533149 C1QTNF1Q9BXJ1 281 aa13.87□□□□□ -0.19
TRAPPC4-213ENST00000533149 CHMP4BQ9H444 224 aaKnown RBP13.87□□□□□ -0.19
TRAPPC4-213ENST00000533149 ZBTB40Q9NUA8 1239 aa13.87□□□□□ -0.19
TRAPPC4-213ENST00000533149 FRMPD3Q5JV73 1810 aa13.86□□□□□ -0.19
TRAPPC4-213ENST00000533149 MROH7-TTC4A0A0A0MT08 1334 aa13.86□□□□□ -0.19
TRAPPC4-213ENST00000533149 PRUNE2Q8WUY3 3088 aa13.86□□□□□ -0.19
TRAPPC4-213ENST00000533149 GPR75-ASB3A0A0A6YYF3 556 aa13.86□□□□□ -0.19
TRAPPC4-213ENST00000533149 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC4-213ENST00000533149 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC4-213ENST00000533149 ASNSP08243 561 aa13.86□□□□□ -0.19
TRAPPC4-213ENST00000533149 MRPS5P82675 430 aaKnown RBP13.86□□□□□ -0.19
TRAPPC4-213ENST00000533149 SNX17Q15036 470 aa13.86□□□□□ -0.19
TRAPPC4-213ENST00000533149 TRIM60Q495X7 471 aa13.86□□□□□ -0.19
TRAPPC4-213ENST00000533149 UHRF1Q96T88 793 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC4-213ENST00000533149 PAGR1Q9BTK6 254 aa13.86□□□□□ -0.19
TRAPPC4-213ENST00000533149 PDLIM7Q9NR12 457 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms