RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 MCM9Q9NXL9 1143 aa36.56■■■■□ 3.44
SSSCA1-207ENST00000533115 HMGCS2P54868 508 aa36.55■■■■□ 3.44
SSSCA1-207ENST00000533115 HDAC1Q13547 482 aaPredicted RBP36.55■■■■□ 3.44
SSSCA1-207ENST00000533115 TREML2Q5T2D2 321 aa36.55■■■■□ 3.44
SSSCA1-207ENST00000533115 TTC41PQ6P2S7 1318 aa36.55■■■■□ 3.44
SSSCA1-207ENST00000533115 SH3D19Q5HYK7 790 aa36.54■■■■□ 3.44
SSSCA1-207ENST00000533115 KBTBD3Q8NAB2 608 aa36.53■■■■□ 3.44
SSSCA1-207ENST00000533115 HTTP42858 3142 aa36.53■■■■□ 3.44
SSSCA1-207ENST00000533115 LOC285556D6RIA3 1793 aa36.53■■■■□ 3.44
SSSCA1-207ENST00000533115 PRKAB2O43741 272 aa36.52■■■■□ 3.44
SSSCA1-207ENST00000533115 BCRP11274 1271 aa36.52■■■■□ 3.44
SSSCA1-207ENST00000533115 SOX10P56693 466 aa36.52■■■■□ 3.44
SSSCA1-207ENST00000533115 GCC1Q96CN9 775 aa36.52■■■■□ 3.44
SSSCA1-207ENST00000533115 ATP8A2Q9NTI2 1148 aa36.52■■■■□ 3.44
SSSCA1-207ENST00000533115 GH2P01242 217 aa36.51■■■■□ 3.44
SSSCA1-207ENST00000533115 BACE1P56817 501 aa36.51■■■■□ 3.44
SSSCA1-207ENST00000533115 OTUD7AQ8TE49 926 aaPredicted RBP36.51■■■■□ 3.44
SSSCA1-207ENST00000533115 ZSWIM8A7E2V4 1837 aa36.5■■■■□ 3.43
SSSCA1-207ENST00000533115 ERC2O15083 957 aa36.5■■■■□ 3.43
SSSCA1-207ENST00000533115 GNRH1P01148 92 aa36.5■■■■□ 3.43
SSSCA1-207ENST00000533115 GABPAQ06546 454 aa36.5■■■■□ 3.43
SSSCA1-207ENST00000533115 MTMR2Q13614 643 aa36.5■■■■□ 3.43
SSSCA1-207ENST00000533115 CERKLQ49MI3 558 aaPredicted RBP36.5■■■■□ 3.43
SSSCA1-207ENST00000533115 PUS7LQ9H0K6 701 aaKnown RBP36.5■■■■□ 3.43
SSSCA1-207ENST00000533115 ZBTB47Q9UFB7 747 aaPredicted RBP36.5■■■■□ 3.43
SSSCA1-207ENST00000533115 PNMA3Q9UL41 463 aa36.5■■■■□ 3.43
SSSCA1-207ENST00000533115 SHMT1P34896 483 aa36.49■■■■□ 3.43
SSSCA1-207ENST00000533115 PABPC4Q13310 644 aaKnown RBP eCLIP36.49■■■■□ 3.434e-8■■■■□ 20.3
SSSCA1-207ENST00000533115 ANKRD45Q5TZF3 282 aa36.49■■■■□ 3.43
SSSCA1-207ENST00000533115 PI4K2BQ8TCG2 481 aa36.49■■■■□ 3.43
SSSCA1-207ENST00000533115 SMCR8Q8TEV9 937 aaPredicted RBP36.49■■■■□ 3.43
SSSCA1-207ENST00000533115 C19orf81C9J6K1 198 aa36.48■■■■□ 3.43
SSSCA1-207ENST00000533115 USP17L10C9JJH3 530 aa36.48■■■■□ 3.43
SSSCA1-207ENST00000533115 CTGFP29279 349 aa36.48■■■■□ 3.43
SSSCA1-207ENST00000533115 PSMC4P43686 418 aa36.48■■■■□ 3.43
SSSCA1-207ENST00000533115 EVX2Q03828 476 aa36.48■■■■□ 3.43
SSSCA1-207ENST00000533115 GLRX3O76003 335 aaKnown RBP36.47■■■■□ 3.43
SSSCA1-207ENST00000533115 ECM2O94769 699 aaPredicted RBP36.47■■■■□ 3.43
SSSCA1-207ENST00000533115 MX1P20591 662 aa36.47■■■■□ 3.43
SSSCA1-207ENST00000533115 ABCB5Q2M3G0 1257 aa36.47■■■■□ 3.43
SSSCA1-207ENST00000533115 TMOD4Q9NZQ9 345 aa36.47■■■■□ 3.43
SSSCA1-207ENST00000533115 PTCH2Q9Y6C5 1203 aa36.47■■■■□ 3.43
SSSCA1-207ENST00000533115 SLC4A4Q9Y6R1 1079 aa36.47■■■■□ 3.43
SSSCA1-207ENST00000533115 CYP2D6P10635 497 aa36.46■■■■□ 3.43
SSSCA1-207ENST00000533115 TRIM47Q96LD4 638 aa36.46■■■■□ 3.43
SSSCA1-207ENST00000533115 RNF113AO15541 343 aaKnown RBP36.45■■■■□ 3.43
SSSCA1-207ENST00000533115 CABP5Q9NP86 173 aa36.45■■■■□ 3.43
SSSCA1-207ENST00000533115 SALL3Q9BXA9 1300 aa36.44■■■■□ 3.42
SSSCA1-207ENST00000533115 FMNL1O95466 1100 aaPredicted RBP36.44■■■■□ 3.42
SSSCA1-207ENST00000533115 ZFYP08048 801 aaPredicted RBP36.44■■■■□ 3.42
SSSCA1-207ENST00000533115 OSBPP22059 807 aa36.44■■■■□ 3.42
SSSCA1-207ENST00000533115 PRMT2P55345 433 aa36.44■■■■□ 3.42
SSSCA1-207ENST00000533115 RAB3GAP1Q15042 981 aa36.44■■■■□ 3.42
SSSCA1-207ENST00000533115 EXOC6Q8TAG9 804 aa36.44■■■■□ 3.42
SSSCA1-207ENST00000533115 DDRGK1Q96HY6 314 aa36.44■■■■□ 3.42
SSSCA1-207ENST00000533115 MLLT1Q03111 559 aaPredicted RBP36.43■■■■□ 3.42
SSSCA1-207ENST00000533115 APPBP2Q92624 585 aa36.43■■■■□ 3.42
SSSCA1-207ENST00000533115 ARMC5Q96C12 935 aa36.43■■■■□ 3.42
SSSCA1-207ENST00000533115 TAOK2Q9UL54 1235 aa36.43■■■■□ 3.42
SSSCA1-207ENST00000533115 BAZ2AQ9UIF9 1905 aaKnown RBP36.42■■■■□ 3.42
SSSCA1-207ENST00000533115 HOXD10P28358 340 aa36.42■■■■□ 3.42
SSSCA1-207ENST00000533115 OSBP2Q969R2 916 aa36.42■■■■□ 3.42
SSSCA1-207ENST00000533115 STRBPQ96SI9 672 aaKnown RBP36.42■■■■□ 3.42
SSSCA1-207ENST00000533115 ASCC2Q9H1I8 757 aaPredicted RBP36.42■■■■□ 3.42
SSSCA1-207ENST00000533115 SWAP70Q9UH65 585 aa36.42■■■■□ 3.42
SSSCA1-207ENST00000533115 SUPT16HQ9Y5B9 1047 aaKnown RBP36.42■■■■□ 3.42
SSSCA1-207ENST00000533115 FCGRTP55899 365 aa36.41■■■■□ 3.42
SSSCA1-207ENST00000533115 LRRFIP1Q32MZ4 808 aaKnown RBP36.41■■■■□ 3.42
SSSCA1-207ENST00000533115 C12orf60Q5U649 245 aa36.41■■■■□ 3.42
SSSCA1-207ENST00000533115 AMOTL1Q8IY63 956 aa36.41■■■■□ 3.42
SSSCA1-207ENST00000533115 RWDD1Q9H446 243 aaPredicted RBP36.41■■■■□ 3.42
SSSCA1-207ENST00000533115 SRRDQ9UH36 339 aa36.41■■■■□ 3.42
SSSCA1-207ENST00000533115 USP17L12C9JPN9 530 aa36.4■■■■□ 3.42
SSSCA1-207ENST00000533115 USP17L21D6R901 530 aa36.4■■■■□ 3.42
SSSCA1-207ENST00000533115 HOXA7P31268 230 aaPredicted RBP36.4■■■■□ 3.42
SSSCA1-207ENST00000533115 USP17L2Q6R6M4 530 aa36.4■■■■□ 3.42
SSSCA1-207ENST00000533115 ANKRD13CQ8N6S4 541 aa36.4■■■■□ 3.42
SSSCA1-207ENST00000533115 DYNLL2Q96FJ2 89 aa36.4■■■■□ 3.42
SSSCA1-207ENST00000533115 GCLCP48506 637 aaPredicted RBP36.39■■■■□ 3.42
SSSCA1-207ENST00000533115 SLC9C1Q4G0N8 1177 aa36.39■■■■□ 3.42
SSSCA1-207ENST00000533115 SLC44A5Q8NCS7 719 aa36.39■■■■□ 3.42
SSSCA1-207ENST00000533115 EMILIN3Q9NT22 766 aa36.39■■■■□ 3.42
SSSCA1-207ENST00000533115 CENPFP49454 3210 aa36.38■■■■□ 3.42
SSSCA1-207ENST00000533115 CYP2D7A0A087X1C5 515 aa36.38■■■■□ 3.41
SSSCA1-207ENST00000533115 GUCY1A2P33402 732 aa36.38■■■■□ 3.41
SSSCA1-207ENST00000533115 FAM110CQ1W6H9 321 aa36.38■■■■□ 3.41
SSSCA1-207ENST00000533115 NBPF11Q86T75 865 aa36.38■■■■□ 3.41
SSSCA1-207ENST00000533115 FEZ1Q99689 392 aa36.38■■■■□ 3.41
SSSCA1-207ENST00000533115 IRX3P78415 501 aaPredicted RBP36.37■■■■□ 3.41
SSSCA1-207ENST00000533115 CTR9Q6PD62 1173 aa36.37■■■■□ 3.41
SSSCA1-207ENST00000533115 FSD1Q9BTV5 496 aa36.37■■■■□ 3.41
SSSCA1-207ENST00000533115 STAP2Q9UGK3 403 aa36.37■■■■□ 3.41
SSSCA1-207ENST00000533115 MGAMO43451 1857 aa36.37■■■■□ 3.41
SSSCA1-207ENST00000533115 MPHOSPH10O00566 681 aaKnown RBP36.36■■■■□ 3.41
SSSCA1-207ENST00000533115 SEPT2Q15019 361 aa36.36■■■■□ 3.41
SSSCA1-207ENST00000533115 MYPNQ86TC9 1320 aa36.35■■■■□ 3.41
SSSCA1-207ENST00000533115 USP14P54578 494 aa36.35■■■■□ 3.41
SSSCA1-207ENST00000533115 ZYXQ15942 572 aaKnown RBP36.35■■■■□ 3.41
SSSCA1-207ENST00000533115 SMC5Q8IY18 1101 aa36.35■■■■□ 3.41
SSSCA1-207ENST00000533115 ACER1Q8TDN7 264 aa36.35■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms