RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 AKNAD1Q5T1N1 836 aa13.33□□□□□ -0.28
TRAPPC4-211ENST00000533012 CYP4F22Q6NT55 531 aa13.33□□□□□ -0.28
TRAPPC4-211ENST00000533012 OPTNQ96CV9 577 aa13.33□□□□□ -0.28
TRAPPC4-211ENST00000533012 TOMM22Q9NS69 142 aa13.33□□□□□ -0.28
TRAPPC4-211ENST00000533012 ZHX2Q9Y6X8 837 aa13.33□□□□□ -0.28
TRAPPC4-211ENST00000533012 ROBO3Q96MS0 1386 aa13.32□□□□□ -0.28
TRAPPC4-211ENST00000533012 SPDYE5A6NIY4 337 aa13.32□□□□□ -0.28
TRAPPC4-211ENST00000533012 USP17L5A8MUK1 530 aa13.32□□□□□ -0.28
TRAPPC4-211ENST00000533012 PRDM1O75626 825 aa13.32□□□□□ -0.28
TRAPPC4-211ENST00000533012 GH2P01242 217 aa13.32□□□□□ -0.28
TRAPPC4-211ENST00000533012 FGRP09769 529 aa13.32□□□□□ -0.28
TRAPPC4-211ENST00000533012 PTPRAP18433 802 aa13.32□□□□□ -0.28
TRAPPC4-211ENST00000533012 RASA1P20936 1047 aa13.32□□□□□ -0.28
TRAPPC4-211ENST00000533012 RNF20Q5VTR2 975 aa13.32□□□□□ -0.28
TRAPPC4-211ENST00000533012 SPRYD7Q5W111 196 aa13.32□□□□□ -0.28
TRAPPC4-211ENST00000533012 TMEM179Q6ZVK1 233 aa13.32□□□□□ -0.28
TRAPPC4-211ENST00000533012 RASAL3Q86YV0 1011 aa13.32□□□□□ -0.28
TRAPPC4-211ENST00000533012 WNK4Q96J92 1243 aa13.32□□□□□ -0.28
TRAPPC4-211ENST00000533012 CAPNS2Q96L46 248 aa13.32□□□□□ -0.28
TRAPPC4-211ENST00000533012 TBC1D2Q9BYX2 928 aa13.32□□□□□ -0.28
TRAPPC4-211ENST00000533012 INCENPQ9NQS7 918 aa13.32□□□□□ -0.28
TRAPPC4-211ENST00000533012 ZBTB21Q9ULJ3 1066 aa13.32□□□□□ -0.28
TRAPPC4-211ENST00000533012 FOCADQ5VW36 1801 aa13.32□□□□□ -0.28
TRAPPC4-211ENST00000533012 TRPM7Q96QT4 1865 aa13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 EPB41L2O43491 1005 aaKnown RBP13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 ORC4O43929 436 aa13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 RANBP6O60518 1105 aaKnown RBP13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 CYP21A2P08686 494 aa13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 SLC10A3P09131 477 aa13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 TSPY3P0CV98 308 aa13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 TSPY8P0CW00 308 aa13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 ZBTB48P10074 688 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 AKR1B1P15121 316 aa13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 VEGFBP49765 207 aa13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 JAG1P78504 1218 aa13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 TFAP4Q01664 338 aa13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 RAB3GAP1Q15042 981 aa13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 NECTIN1Q15223 517 aa13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 RRP12Q5JTH9 1297 aaKnown RBP13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 STAG1Q8WVM7 1258 aa13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 CNKSR2Q8WXI2 1034 aa13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 OTUD5Q96G74 571 aa13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 AS3MTQ9HBK9 375 aa13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 WDR33Q9C0J8 1336 aaKnown RBP13.31□□□□□ -0.28
TRAPPC4-211ENST00000533012 NAV1Q8NEY1 1877 aa13.3□□□□□ -0.28
TRAPPC4-211ENST00000533012 CDK5RAP2Q96SN8 1893 aa13.3□□□□□ -0.28
TRAPPC4-211ENST00000533012 TSPY2A6NKD2 308 aa13.3□□□□□ -0.28
TRAPPC4-211ENST00000533012 FAM155AB1AL88 458 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC4-211ENST00000533012 NT5C2P49902 561 aa13.3□□□□□ -0.28
TRAPPC4-211ENST00000533012 TRDNQ13061 729 aa13.3□□□□□ -0.28
TRAPPC4-211ENST00000533012 MKRN3Q13064 507 aaKnown RBP13.3□□□□□ -0.28
TRAPPC4-211ENST00000533012 NOGQ13253 232 aa13.3□□□□□ -0.28
TRAPPC4-211ENST00000533012 PPIL2Q13356 520 aa13.3□□□□□ -0.28
TRAPPC4-211ENST00000533012 FAM47AQ5JRC9 791 aa13.3□□□□□ -0.28
TRAPPC4-211ENST00000533012 CREB3L3Q68CJ9 461 aa13.3□□□□□ -0.28
TRAPPC4-211ENST00000533012 TBC1D10CQ8IV04 446 aa13.3□□□□□ -0.28
TRAPPC4-211ENST00000533012 ZNF280CQ8ND82 737 aa13.3□□□□□ -0.28
TRAPPC4-211ENST00000533012 ESR2Q92731 530 aa13.3□□□□□ -0.28
TRAPPC4-211ENST00000533012 KRT23Q9C075 422 aa13.3□□□□□ -0.28
TRAPPC4-211ENST00000533012 CNNM2Q9H8M5 875 aa13.3□□□□□ -0.28
TRAPPC4-211ENST00000533012 KANSL2Q9H9L4 492 aa13.3□□□□□ -0.28
TRAPPC4-211ENST00000533012 MYH1P12882 1939 aa13.3□□□□□ -0.28
TRAPPC4-211ENST00000533012 CXCL11O14625 94 aa13.29□□□□□ -0.28
TRAPPC4-211ENST00000533012 IRF6O14896 467 aa13.29□□□□□ -0.28
TRAPPC4-211ENST00000533012 SLC27A2O14975 620 aa13.29□□□□□ -0.28
TRAPPC4-211ENST00000533012 ZKSCAN1P17029 563 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC4-211ENST00000533012 MAP2K2P36507 400 aa13.29□□□□□ -0.28
TRAPPC4-211ENST00000533012 GTF2A2P52657 109 aa13.29□□□□□ -0.28
TRAPPC4-211ENST00000533012 INHBEP58166 350 aa13.29□□□□□ -0.28
TRAPPC4-211ENST00000533012 SPP2Q13103 211 aa13.29□□□□□ -0.28
TRAPPC4-211ENST00000533012 SEPT2Q15019 361 aa13.29□□□□□ -0.28
TRAPPC4-211ENST00000533012 SHROOM1Q2M3G4 852 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC4-211ENST00000533012 NEDD1Q8NHV4 660 aa13.29□□□□□ -0.28
TRAPPC4-211ENST00000533012 WDR18Q9BV38 432 aa13.29□□□□□ -0.28
TRAPPC4-211ENST00000533012 USP26Q9BXU7 913 aa13.29□□□□□ -0.28
TRAPPC4-211ENST00000533012 NBPF3Q9H094 633 aa13.29□□□□□ -0.28
TRAPPC4-211ENST00000533012 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC4-211ENST00000533012 AFG3L2Q9Y4W6 797 aa13.29□□□□□ -0.28
TRAPPC4-211ENST00000533012 TACC3Q9Y6A5 838 aa13.29□□□□□ -0.28
TRAPPC4-211ENST00000533012 MANSC4A6NHS7 340 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC4-211ENST00000533012 TRIM75PA6NK02 468 aa13.28□□□□□ -0.28
TRAPPC4-211ENST00000533012 E7EWF7 191 aa13.28□□□□□ -0.28
TRAPPC4-211ENST00000533012 AOC2O75106 756 aa13.28□□□□□ -0.28
TRAPPC4-211ENST00000533012 MCCP23508 829 aa13.28□□□□□ -0.28
TRAPPC4-211ENST00000533012 GUCY1A2P33402 732 aa13.28□□□□□ -0.28
TRAPPC4-211ENST00000533012 GJA5P36382 358 aa13.28□□□□□ -0.28
TRAPPC4-211ENST00000533012 KIF23Q02241 960 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC4-211ENST00000533012 SNAPC2Q13487 334 aa13.28□□□□□ -0.28
TRAPPC4-211ENST00000533012 PPP4R3BQ5MIZ7 849 aa13.28□□□□□ -0.28
TRAPPC4-211ENST00000533012 CCDC84Q86UT8 332 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC4-211ENST00000533012 REM2Q8IYK8 340 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC4-211ENST00000533012 DNAJC5GQ8N7S2 189 aa13.28□□□□□ -0.28
TRAPPC4-211ENST00000533012 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.28□□□□□ -0.28
TRAPPC4-211ENST00000533012 DDX60LQ5H9U9 1706 aaKnown RBP13.27□□□□□ -0.28
TRAPPC4-211ENST00000533012 BAZ2AQ9UIF9 1905 aaKnown RBP13.27□□□□□ -0.28
TRAPPC4-211ENST00000533012 B4E1Z4 1266 aa13.27□□□□□ -0.29
TRAPPC4-211ENST00000533012 C19orf81C9J6K1 198 aa13.27□□□□□ -0.29
TRAPPC4-211ENST00000533012 USP17L10C9JJH3 530 aa13.27□□□□□ -0.29
TRAPPC4-211ENST00000533012 CETPP11597 493 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms