RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 CHMP4BQ9H444 224 aaKnown RBP21.62■■□□□ 1.05
SMG1-203ENST00000532700 DCTPP1Q9H773 170 aa21.62■■□□□ 1.05
SMG1-203ENST00000532700 ARMT1Q9H993 441 aa21.62■■□□□ 1.05
SMG1-203ENST00000532700 GABRQQ9UN88 632 aa21.62■■□□□ 1.05
SMG1-203ENST00000532700 SLC45A1Q9Y2W3 748 aa21.62■■□□□ 1.05
SMG1-203ENST00000532700 TTF1Q15361 905 aaPredicted RBP21.61■■□□□ 1.05
SMG1-203ENST00000532700 SLC9C1Q4G0N8 1177 aa21.61■■□□□ 1.05
SMG1-203ENST00000532700 SH3D19Q5HYK7 790 aa21.61■■□□□ 1.05
SMG1-203ENST00000532700 SRRDQ9UH36 339 aa21.61■■□□□ 1.05
SMG1-203ENST00000532700 EN2P19622 333 aaPredicted RBP21.6■■□□□ 1.05
SMG1-203ENST00000532700 SHMT1P34896 483 aa21.6■■□□□ 1.05
SMG1-203ENST00000532700 ADD2P35612 726 aa21.6■■□□□ 1.05
SMG1-203ENST00000532700 PRKCZQ05513 592 aa21.6■■□□□ 1.05
SMG1-203ENST00000532700 KIF22Q14807 665 aa21.6■■□□□ 1.05
SMG1-203ENST00000532700 TATDN1Q6P1N9 297 aa21.6■■□□□ 1.05
SMG1-203ENST00000532700 PROCA1Q8NCQ7 364 aaPredicted RBP21.6■■□□□ 1.05
SMG1-203ENST00000532700 WDR18Q9BV38 432 aa21.6■■□□□ 1.05
SMG1-203ENST00000532700 MYH8P13535 1937 aa21.6■■□□□ 1.05
SMG1-203ENST00000532700 MKI67P46013 3256 aaKnown RBP21.59■■□□□ 1.05
SMG1-203ENST00000532700 FMNL1O95466 1100 aaPredicted RBP21.59■■□□□ 1.05
SMG1-203ENST00000532700 GH2P01242 217 aa21.59■■□□□ 1.05
SMG1-203ENST00000532700 HLA-DOAP06340 250 aa21.59■■□□□ 1.05
SMG1-203ENST00000532700 POTEEQ6S8J3 1075 aa21.59■■□□□ 1.05
SMG1-203ENST00000532700 ANKRD13CQ8N6S4 541 aa21.59■■□□□ 1.05
SMG1-203ENST00000532700 OTUD7AQ8TE49 926 aaPredicted RBP21.59■■□□□ 1.05
SMG1-203ENST00000532700 ASCC2Q9H1I8 757 aaPredicted RBP21.59■■□□□ 1.05
SMG1-203ENST00000532700 MYPNQ86TC9 1320 aa21.58■■□□□ 1.05
SMG1-203ENST00000532700 MBD4O95243 580 aa21.58■■□□□ 1.05
SMG1-203ENST00000532700 ASNSP08243 561 aa21.58■■□□□ 1.05
SMG1-203ENST00000532700 GUCY1A2P33402 732 aa21.58■■□□□ 1.05
SMG1-203ENST00000532700 BACE1P56817 501 aa21.58■■□□□ 1.05
SMG1-203ENST00000532700 GABPAQ06546 454 aa21.58■■□□□ 1.05
SMG1-203ENST00000532700 MTFR1Q15390 333 aa21.58■■□□□ 1.05
SMG1-203ENST00000532700 SLC44A5Q8NCS7 719 aa21.58■■□□□ 1.05
SMG1-203ENST00000532700 SMCR8Q8TEV9 937 aaPredicted RBP21.58■■□□□ 1.05
SMG1-203ENST00000532700 CRBNQ96SW2 442 aa21.58■■□□□ 1.05
SMG1-203ENST00000532700 EHD4Q9H223 541 aa21.58■■□□□ 1.05
SMG1-203ENST00000532700 DCP1AQ9NPI6 582 aaPredicted RBP21.58■■□□□ 1.05
SMG1-203ENST00000532700 SERPINB13Q9UIV8 391 aa21.58■■□□□ 1.05
SMG1-203ENST00000532700 KIAA0100Q14667 2235 aaKnown RBP21.57■■□□□ 1.04
SMG1-203ENST00000532700 CYP2D7A0A087X1C5 515 aa21.57■■□□□ 1.04
SMG1-203ENST00000532700 TRIM34Q9BYJ4 488 aa21.57■■□□□ 1.04
SMG1-203ENST00000532700 EMILIN3Q9NT22 766 aa21.57■■□□□ 1.04
SMG1-203ENST00000532700 DYNLL2Q96FJ2 89 aa21.56■■□□□ 1.04
SMG1-203ENST00000532700 CRNKL1Q9BZJ0 848 aaKnown RBP21.56■■□□□ 1.04
SMG1-203ENST00000532700 AS3MTQ9HBK9 375 aa21.56■■□□□ 1.04
SMG1-203ENST00000532700 GNRH1P01148 92 aa21.55■■□□□ 1.04
SMG1-203ENST00000532700 FCGRTP55899 365 aa21.55■■□□□ 1.04
SMG1-203ENST00000532700 ARHGEF6Q15052 776 aa21.55■■□□□ 1.04
SMG1-203ENST00000532700 ZYXQ15942 572 aaKnown RBP21.55■■□□□ 1.04
SMG1-203ENST00000532700 TMED8Q6PL24 325 aaPredicted RBP21.55■■□□□ 1.04
SMG1-203ENST00000532700 CERS3Q8IU89 383 aa21.55■■□□□ 1.04
SMG1-203ENST00000532700 ACER1Q8TDN7 264 aa21.55■■□□□ 1.04
SMG1-203ENST00000532700 TBC1D2Q9BYX2 928 aa21.55■■□□□ 1.04
SMG1-203ENST00000532700 PUS7LQ9H0K6 701 aaKnown RBP21.55■■□□□ 1.04
SMG1-203ENST00000532700 TXNRD2Q9NNW7 524 aa21.55■■□□□ 1.04
SMG1-203ENST00000532700 MCM9Q9NXL9 1143 aa21.55■■□□□ 1.04
SMG1-203ENST00000532700 CLEC10AQ8IUN9 316 aa21.54■■□□□ 1.04
SMG1-203ENST00000532700 SHISA4Q96DD7 197 aa21.54■■□□□ 1.04
SMG1-203ENST00000532700 P2RX7Q99572 595 aaKnown RBP21.54■■□□□ 1.04
SMG1-203ENST00000532700 ECHDC1Q9NTX5 307 aa21.54■■□□□ 1.04
SMG1-203ENST00000532700 PDE4DIPQ5VU43 2346 aa21.54■■□□□ 1.04
SMG1-203ENST00000532700 USP17L10C9JJH3 530 aa21.53■■□□□ 1.04
SMG1-203ENST00000532700 POLR3DP05423 398 aaPredicted RBP21.53■■□□□ 1.04
SMG1-203ENST00000532700 ELNP15502 786 aa21.53■■□□□ 1.04
SMG1-203ENST00000532700 RAB3GAP1Q15042 981 aa21.53■■□□□ 1.04
SMG1-203ENST00000532700 FAM110CQ1W6H9 321 aa21.53■■□□□ 1.04
SMG1-203ENST00000532700 TTC6Q86TZ1 520 aa21.53■■□□□ 1.04
SMG1-203ENST00000532700 RLFQ13129 1914 aa21.53■■□□□ 1.04
SMG1-203ENST00000532700 GRK4P32298 578 aa21.52■■□□□ 1.04
SMG1-203ENST00000532700 FLT3LGP49771 235 aa21.52■■□□□ 1.04
SMG1-203ENST00000532700 PRMT2P55345 433 aa21.52■■□□□ 1.04
SMG1-203ENST00000532700 SEPT2Q15019 361 aa21.52■■□□□ 1.04
SMG1-203ENST00000532700 ABCB5Q2M3G0 1257 aa21.52■■□□□ 1.04
SMG1-203ENST00000532700 CERKLQ49MI3 558 aaPredicted RBP21.52■■□□□ 1.04
SMG1-203ENST00000532700 RAET1EQ8TD07 263 aa21.52■■□□□ 1.04
SMG1-203ENST00000532700 HOXA7P31268 230 aaPredicted RBP21.51■■□□□ 1.03
SMG1-203ENST00000532700 UBE3CQ15386 1083 aa21.51■■□□□ 1.03
SMG1-203ENST00000532700 PNMA3Q9UL41 463 aa21.51■■□□□ 1.03
SMG1-203ENST00000532700 PARP14Q460N5 1801 aa21.5■■□□□ 1.03
SMG1-203ENST00000532700 A0A1W2PRG0 241 aa21.5■■□□□ 1.03
SMG1-203ENST00000532700 TNPO2O14787 897 aaKnown RBP21.5■■□□□ 1.03
SMG1-203ENST00000532700 KIAA1755Q5JYT7 1200 aa21.5■■□□□ 1.03
SMG1-203ENST00000532700 NBPF11Q86T75 865 aa21.5■■□□□ 1.03
SMG1-203ENST00000532700 PI4K2BQ8TCG2 481 aa21.5■■□□□ 1.03
SMG1-203ENST00000532700 GINM1Q9NU53 330 aa21.5■■□□□ 1.03
SMG1-203ENST00000532700 TMOD4Q9NZQ9 345 aa21.5■■□□□ 1.03
SMG1-203ENST00000532700 GREB1LQ9C091 1923 aaPredicted RBP21.5■■□□□ 1.03
SMG1-203ENST00000532700 C19orf81C9J6K1 198 aa21.49■■□□□ 1.03
SMG1-203ENST00000532700 HERVK_113P62684 666 aa21.49■■□□□ 1.03
SMG1-203ENST00000532700 OSBP2Q969R2 916 aa21.49■■□□□ 1.03
SMG1-203ENST00000532700 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.49■■□□□ 1.032e-8■■□□□ 13.1
SMG1-203ENST00000532700 RBPJLQ9UBG7 517 aa21.49■■□□□ 1.03
SMG1-203ENST00000532700 MORF4L1Q9UBU8 362 aa21.49■■□□□ 1.03
SMG1-203ENST00000532700 SALL3Q9BXA9 1300 aa21.49■■□□□ 1.03
SMG1-203ENST00000532700 A0A0G2JMZ2 1700 aa21.49■■□□□ 1.03
SMG1-203ENST00000532700 USP17L12C9JPN9 530 aa21.48■■□□□ 1.03
SMG1-203ENST00000532700 USP17L21D6R901 530 aa21.48■■□□□ 1.03
SMG1-203ENST00000532700 ADCY3O60266 1144 aa21.48■■□□□ 1.03
SMG1-203ENST00000532700 CNMDO75829 334 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms